BLASTX nr result

ID: Atractylodes22_contig00017716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00017716
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   364   2e-98
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   360   3e-97
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   340   4e-91
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...   338   1e-90
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   328   1e-87

>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  364 bits (934), Expect = 2e-98
 Identities = 176/227 (77%), Positives = 206/227 (90%)
 Frame = -2

Query: 826 RPPAMAVQAQAKRRFSLKKEEETATPADMHFEAPLKIVQYPDPILRAKNKRVDAFDENLK 647
           +PP++ V+AQAKR FS K EEE ATPAD+ FE PLKIV+YPDPILR KNKR+D FD+NLK
Sbjct: 57  KPPSIPVRAQAKRSFSFK-EEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLK 115

Query: 646 KLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPIGERGEGEEIVLVNPRVTTYSKKLVP 467
           KLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP+GERGEGEEIVL+NPR+  YSKK+VP
Sbjct: 116 KLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVP 175

Query: 466 FTEGCLSFPGINADVVRPEAVKVDAQDITGAKFSVSLSGLPSRIFQHEFDHLEGILFFDR 287
           F EGCLSFPGI ADV+RPE+VK+DA+DI GA+F+V+LSGLP+R+FQHE+DHLEGILFFDR
Sbjct: 176 FNEGCLSFPGIYADVLRPESVKIDARDINGARFTVNLSGLPARVFQHEYDHLEGILFFDR 235

Query: 286 MTAKVVDSIRSELQALEQKYEDRTGLLRPESIETRKRWKAAAGFGRS 146
           MT +V+DSIR++LQALE+K+ED+TG   PE IETRK  KAAAGFG+S
Sbjct: 236 MTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGKS 282


>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  360 bits (924), Expect = 3e-97
 Identities = 186/273 (68%), Positives = 212/273 (77%)
 Frame = -2

Query: 964 ANWLHSSSLSHATFPXXXXXXXXXXXXXRPANSSQERPVFSSSYQYRPPAMAVQAQAKRR 785
           A+ LHSS LS+   P                        FSS+ ++R P M VQ QAKR 
Sbjct: 4   ASCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQVQVQAKRG 63

Query: 784 FSLKKEEETATPADMHFEAPLKIVQYPDPILRAKNKRVDAFDENLKKLVDEMFDVMYKTD 605
           FS K EE  A+PAD+ FEAPLKIV+YPDPILRAKNK +  FD+NLKKLVDEMFDVMYKTD
Sbjct: 64  FSFK-EEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYKTD 122

Query: 604 GIGLSAPQVGINVQLMVFNPIGERGEGEEIVLVNPRVTTYSKKLVPFTEGCLSFPGINAD 425
           GIGLSAPQVGINVQLMVFNP+GERGEGEEIVLVNPRV  YSKK+V F EGCLSFPGI AD
Sbjct: 123 GIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIYAD 182

Query: 424 VVRPEAVKVDAQDITGAKFSVSLSGLPSRIFQHEFDHLEGILFFDRMTAKVVDSIRSELQ 245
           V RPE+VK+DA+DITGA+F ++LSGLP+R+FQHEFDHL+G LFFDRMT +V+DSI + LQ
Sbjct: 183 VERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSIHANLQ 242

Query: 244 ALEQKYEDRTGLLRPESIETRKRWKAAAGFGRS 146
            LE+KYEDRTG   PE IETRKR K AAGFG+S
Sbjct: 243 DLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  340 bits (871), Expect = 4e-91
 Identities = 173/274 (63%), Positives = 207/274 (75%), Gaps = 1/274 (0%)
 Frame = -2

Query: 964 ANWLHSSSLSHATFPXXXXXXXXXXXXXRPANSSQERPVFSSSYQYRPPAMAVQAQAKRR 785
           A+W  SSS +    P                       +F S+   +PP +AV AQA+R 
Sbjct: 6   ASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRV 65

Query: 784 FSLK-KEEETATPADMHFEAPLKIVQYPDPILRAKNKRVDAFDENLKKLVDEMFDVMYKT 608
            S K K +E ATPAD+ F  PLKIV+YPDPILRAKNKR+D FD NLKKLVDEMFD+MYKT
Sbjct: 66  LSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKT 125

Query: 607 DGIGLSAPQVGINVQLMVFNPIGERGEGEEIVLVNPRVTTYSKKLVPFTEGCLSFPGINA 428
           DGIGLSAPQVG+NVQLMVFN  GERGEGEEIVLVNPRV+ YS++++P+ EGCLSFP I+ 
Sbjct: 126 DGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHG 185

Query: 427 DVVRPEAVKVDAQDITGAKFSVSLSGLPSRIFQHEFDHLEGILFFDRMTAKVVDSIRSEL 248
           DV RPE+VKVDAQDI G +F +SLS LP+R+FQHEFDHL+G+LFFD+MT +V+D+IR +L
Sbjct: 186 DVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKL 245

Query: 247 QALEQKYEDRTGLLRPESIETRKRWKAAAGFGRS 146
            ALE+KYEDRTGL  PESI TRK  KAA GFG+S
Sbjct: 246 VALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279


>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
           gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
           trichocarpa]
          Length = 258

 Score =  338 bits (867), Expect = 1e-90
 Identities = 169/232 (72%), Positives = 199/232 (85%)
 Frame = -2

Query: 844 SSSYQYRPPAMAVQAQAKRRFSLKKEEETATPADMHFEAPLKIVQYPDPILRAKNKRVDA 665
           S+  Q RPP++ V++QAKR   LK+++  AT +D+ FEAPLKIV+YPDPILRAKNKR+D+
Sbjct: 28  STMKQPRPPSLFVRSQAKRGPFLKQDQVAAT-SDLEFEAPLKIVEYPDPILRAKNKRIDS 86

Query: 664 FDENLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPIGERGEGEEIVLVNPRVTTY 485
           FD+NLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNP  E GEG+EIVLVNPRV  Y
Sbjct: 87  FDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKY 146

Query: 484 SKKLVPFTEGCLSFPGINADVVRPEAVKVDAQDITGAKFSVSLSGLPSRIFQHEFDHLEG 305
           SKK V F EGCLSFPGI ADV RPE+VK+DA+DI GA+F+V+LSGLP+R+FQHEFDHL+G
Sbjct: 147 SKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQG 206

Query: 304 ILFFDRMTAKVVDSIRSELQALEQKYEDRTGLLRPESIETRKRWKAAAGFGR 149
           ILFFDRMT +V+DSIR  LQALE+KYED+TG   PE IET +  K AAGFG+
Sbjct: 207 ILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  328 bits (841), Expect = 1e-87
 Identities = 170/266 (63%), Positives = 205/266 (77%)
 Frame = -2

Query: 943 SLSHATFPXXXXXXXXXXXXXRPANSSQERPVFSSSYQYRPPAMAVQAQAKRRFSLKKEE 764
           SL HA  P             R +  S    +FS S +++ P+  V AQAKR FS K E+
Sbjct: 10  SLPHALLPTVSCWLSPPAVFRRLSGFSSTCKLFSHSSKFKAPSTLVYAQAKRGFSAK-ED 68

Query: 763 ETATPADMHFEAPLKIVQYPDPILRAKNKRVDAFDENLKKLVDEMFDVMYKTDGIGLSAP 584
           + A+  D+ FEAPLKIV+YPDPILRAKNKR+ +FD+NLKKLV EMFDVMYKTDGIGLSAP
Sbjct: 69  DVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMYKTDGIGLSAP 128

Query: 583 QVGINVQLMVFNPIGERGEGEEIVLVNPRVTTYSKKLVPFTEGCLSFPGINADVVRPEAV 404
           QVG+NVQLMVFN +GERGEGEEIVLVNP+V  YSKK V F EGCLSFP I ADV RPE++
Sbjct: 129 QVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMIYADVERPESI 188

Query: 403 KVDAQDITGAKFSVSLSGLPSRIFQHEFDHLEGILFFDRMTAKVVDSIRSELQALEQKYE 224
           K+DA+DI+G +F V+LSGL +R+FQHEFDHL+G LFFDRMT +V+++IR +LQALE+KYE
Sbjct: 189 KIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRPQLQALEKKYE 248

Query: 223 DRTGLLRPESIETRKRWKAAAGFGRS 146
           DRTGL  PE IE  +R K  AGFG+S
Sbjct: 249 DRTGLPSPERIENFRR-KVGAGFGKS 273


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