BLASTX nr result
ID: Atractylodes22_contig00014495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00014495
(1309 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 330 6e-88
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 323 8e-86
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme... 298 2e-78
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 298 3e-78
ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arab... 297 4e-78
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 330 bits (845), Expect = 6e-88
Identities = 198/418 (47%), Positives = 251/418 (60%), Gaps = 10/418 (2%)
Frame = -3
Query: 1226 SSLRVTNPS----YVEQHFSCSPSASHCGSPVEKKLFA-PFSPPTPNYLSCTSNYKISQQ 1062
S L++ N S Y+ + +ASH SP K L + P S P +S Q
Sbjct: 49 SHLKIRNLSALINYMVGKAAQGDAASH--SPTPKHLISSPSSTPKKARRQASS-----PQ 101
Query: 1061 SLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYC 882
+ L ELEFRK F++ SYIG + E +S E+ I +K +PM FE +W+ GR++
Sbjct: 102 LVALGELEFRKAFLILSYIGDKRPEDLLSAEE---ILKLKNLPMGVFETEVWNNLGRKFI 158
Query: 881 HPCDRAMYLDWDSGKTHLYSCYVCSDGGYQFKGPYLDTKKTHLQRAIGDENVLIVKFAE- 705
DR DWDS KTH+Y C+V DG Y+FKGPYL+ +THLQR +GDEN+L+VKFAE
Sbjct: 159 KEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKGPYLNKTRTHLQRVLGDENILLVKFAED 218
Query: 704 ATDM----CNMMSNASITYEKIAEAGILVGLRRYRFFVFKDGGKERQKNGKDDNKRVSSG 537
TD C+ SNAS Y KIA GI VGLR+YRFFVFKDGGKE +K +
Sbjct: 219 VTDRSSLNCSTDSNAS--YNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP-------TS 269
Query: 536 GVKCYFVKRESVAPWDDRDTFLMNYKTTHDVRCLFMHVHMVSSMAKYIARFSLILSTTIK 357
VKCYFV ES A ++ KT H+ RC+FMH HMVSS+AKY+ARFSLILS T+K
Sbjct: 270 SVKCYFVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFSLILSKTVK 320
Query: 356 LQVDLALVSVEEIEDIPCIDEKGCIVYDEDGEPQILTDGTGFISENLAVLVPDNFYNAKY 177
L VDL+ V+++ I+D P DE G +VYDED +P ILTDGTGFISE+LA+ P+N KY
Sbjct: 321 LDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKY 380
Query: 176 MKDTDYKKLDLVQTEIGSVGLRGKEALVKEPPLLIQCRLYNEGFAVKGTLLVNKKLKP 3
M + + PLLIQCRL+N G AVKGTLL+N+KL P
Sbjct: 381 MNNGN------------------------SDPLLIQCRLFNNGCAVKGTLLLNRKLPP 414
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 323 bits (827), Expect = 8e-86
Identities = 199/426 (46%), Positives = 252/426 (59%), Gaps = 18/426 (4%)
Frame = -3
Query: 1226 SSLRVTNPS----YVEQHFSCSPSASHCGSPVEKKLFA-PFSPPTPNYLSCTSNYKISQQ 1062
S L++ N S Y+ + +ASH SP K L + P S P +S Q
Sbjct: 49 SHLKIRNLSALINYMVGKAAQGDAASH--SPTPKHLISSPSSTPKKARRQASS-----PQ 101
Query: 1061 SLILSELEFRKLFMVHSYIGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYC 882
+ L ELEFRK F++ SYIG + E +S E+ I +K +PM FE +W+ GR++
Sbjct: 102 LVALGELEFRKAFLILSYIGELRPEDLLSAEE---ILKLKNLPMGVFETEVWNNLGRKFI 158
Query: 881 HPCDRAMYLDWDSGKTHLYSCYVCSDGGYQFK--------GPYLDTKKTHLQRAIGDENV 726
DR DWDS KTH+Y C+V DG Y+FK GPYL+ +THLQR +GDEN+
Sbjct: 159 KEEDRQRSFDWDSDKTHIYHCHVSPDGSYRFKVCISSSLNGPYLNKTRTHLQRVLGDENI 218
Query: 725 LIVKFAE-ATDM----CNMMSNASITYEKIAEAGILVGLRRYRFFVFKDGGKERQKNGKD 561
L+VKFAE TD C+ SNAS Y KIA GI VGLR+YRFFVFKDGGKE +K
Sbjct: 219 LLVKFAEDVTDRSSLNCSTDSNAS--YNKIAREGIFVGLRQYRFFVFKDGGKEEKKKNP- 275
Query: 560 DNKRVSSGGVKCYFVKRESVAPWDDRDTFLMNYKTTHDVRCLFMHVHMVSSMAKYIARFS 381
+ VKCYFV ES A ++ KT H+ RC+FMH HMVSS+AKY+ARFS
Sbjct: 276 ------TSSVKCYFVFMESSA---------LSGKTVHEARCIFMHAHMVSSVAKYMARFS 320
Query: 380 LILSTTIKLQVDLALVSVEEIEDIPCIDEKGCIVYDEDGEPQILTDGTGFISENLAVLVP 201
LILS T+KL VDL+ V+++ I+D P DE G +VYDED +P ILTDGTGFISE+LA+ P
Sbjct: 321 LILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVVYDEDWKPLILTDGTGFISEDLALRCP 380
Query: 200 DNFYNAKYMKDTDYKKLDLVQTEIGSVGLRGKEALVKEPPLLIQCRLYNEGFAVKGTLLV 21
+N KYM + + D PLLIQCRL+N G AVKGTLL+
Sbjct: 381 NNLCRGKYMNNGNSDVCD------------------SRYPLLIQCRLFNNGCAVKGTLLL 422
Query: 20 NKKLKP 3
N+KL P
Sbjct: 423 NRKLPP 428
>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
Length = 953
Score = 298 bits (763), Expect = 2e-78
Identities = 173/393 (44%), Positives = 242/393 (61%), Gaps = 6/393 (1%)
Frame = -3
Query: 1163 SHCGSPVEKKLFAPFSPPTPNYLSCTSNYKISQQSLILSELEFRKLFMVHSYIGSNKLEV 984
S G P ++ +P PP P S L ELEFRK F++ SYIG LE
Sbjct: 64 SFAGFPSTRQQTSPTRPPRPTPSSLLH---------ALGELEFRKAFLILSYIGRESLEN 114
Query: 983 AVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYCHPCDRAMYLDWDSGKTHLYSCYVCSD 804
++ DA I+S+K +PM FE +W FG + + ++W+SG+TH+Y C+V D
Sbjct: 115 CIT--DA-KIRSLKDLPMAKFEKTIWEDFGEKCIYDQSDRQLVNWNSGRTHVYQCFVFPD 171
Query: 803 GGYQFKGPYLDTKKTHLQRAIGDENVLIVKFAEATDMCNMMSN---ASITYEKIAEAGIL 633
G +FKGP L + +THLQ+ +GD+NVL+VKFAE N ++ A+ Y K + GI
Sbjct: 172 GNLRFKGPILQSTRTHLQKTLGDDNVLLVKFAEDGSGKNFRTHAEEANALYGKFGKEGIR 231
Query: 632 VGLRRYRFFVFKDGGKERQKNGKDDNKRVSSGGVKCYFVKRESVAPWDDRDTFLMNYKTT 453
VGLR YRFFVFKDGG E ++ K +S VKCYFV+ +S D+ ++++ KT
Sbjct: 232 VGLRLYRFFVFKDGGNEEKQ------KDPTSSTVKCYFVRMQSGCSADEGADYILSNKTV 285
Query: 452 HDVRCLFMHVHM-VSSMAKYIARFSLILSTTIKLQVDLALVSVEEIEDIPCIDEKGCIVY 276
+ R LFMH HM + ++ KY+ARFSLILS T+KL +DL VSV++I D C D G I+
Sbjct: 286 SEARTLFMHAHMLLPNLNKYMARFSLILSKTLKLNIDLTTVSVQKIPDEYCKDANGNIMV 345
Query: 275 DEDGEPQILTDGTGFISENLAVLVPDNFYNAKYMKDTDYKKL-DLVQTEIGSVGLRGKEA 99
D + +P+ILTDGTGFIS +LA+L P+N Y +++ +++ +LV+ E S + E
Sbjct: 346 DNE-KPRILTDGTGFISRDLALLCPNNVYKGSNLENNCIQEINNLVELEDMSNAMGEAEQ 404
Query: 98 L-VKEPPLLIQCRLYNEGFAVKGTLLVNKKLKP 3
L EPPLLIQCRL++ G A+KGTLLVN+KL P
Sbjct: 405 LSTHEPPLLIQCRLFHMGHAIKGTLLVNRKLPP 437
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 298 bits (762), Expect = 3e-78
Identities = 166/396 (41%), Positives = 238/396 (60%), Gaps = 3/396 (0%)
Frame = -3
Query: 1181 SCSPSASHCGSPVEKKLFAPFSPPTPNYLSCTSNYKISQ--QSLILSELEFRKLFMVHSY 1008
S SPS H +++++ P+P L N Q + L ELEF+K F++ SY
Sbjct: 99 SRSPSGRHVCRVLQEEMSVDSDAPSPKSLKSEENGGSLHIPQLVALGELEFKKAFLLLSY 158
Query: 1007 IGSNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYCHPCDRAMYLDWDSGKTHL 828
I +L + ++ I+ K +PM+ +E +W + GRRYC DR M L WDSGKTH
Sbjct: 159 IPGQQLGQVTTADE---IRLWKDLPMVAYEAAVWDRLGRRYCPQTDRRM-LQWDSGKTHY 214
Query: 827 YSCYVCSDGGYQFKGPYLDTKKTHLQRAIGDENVLIVKFAEATDMCNMMSNAS-ITYEKI 651
Y C+V DG Y FKGP L+ THL + +GDENVL VKFA+ + SN TY++I
Sbjct: 215 YQCHVAPDGSYTFKGPLLEHTGTHLHKVLGDENVLTVKFADVPKNSSTYSNDRYFTYKEI 274
Query: 650 AEAGILVGLRRYRFFVFKDGGKERQKNGKDDNKRVSSGGVKCYFVKRESVAPWDDRDTFL 471
A+ GI++GLRRY+FFVFKDGGKE +K K +S+ VKCYF++ +S A D + ++
Sbjct: 275 AKNGIMIGLRRYQFFVFKDGGKEEKK------KDLSTKKVKCYFIRTDSTASCDMENPYI 328
Query: 470 MNYKTTHDVRCLFMHVHMVSSMAKYIARFSLILSTTIKLQVDLALVSVEEIEDIPCIDEK 291
K+ H+ R FMHVH ++A Y+ARFSLILS T L+VD+ ++ + I+DI C D+
Sbjct: 329 FTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIHCHDQD 388
Query: 290 GCIVYDEDGEPQILTDGTGFISENLAVLVPDNFYNAKYMKDTDYKKLDLVQTEIGSVGLR 111
G V D++ +P I +DGTG+ISE+LA + P N + K ++ +
Sbjct: 389 GKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENI---------------- 432
Query: 110 GKEALVKEPPLLIQCRLYNEGFAVKGTLLVNKKLKP 3
+EA ++PPLLIQ R++ +G+AVKGT L+NKKL P
Sbjct: 433 -QEACNQDPPLLIQFRMFYDGYAVKGTFLLNKKLCP 467
>ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 992
Score = 297 bits (761), Expect = 4e-78
Identities = 164/393 (41%), Positives = 238/393 (60%), Gaps = 2/393 (0%)
Frame = -3
Query: 1175 SPSASHCGSPVEKKLFAPFSPPTPNYLSCTSN--YKISQQSLILSELEFRKLFMVHSYIG 1002
+P+ C + + L P+P ++ N K L L ELEF+K F++ SYIG
Sbjct: 102 TPAKKSCRASQDVSL--DLETPSPKFMKREENGGSKYIPPLLALGELEFKKAFLLLSYIG 159
Query: 1001 SNKLEVAVSVEDAIYIKSMKTIPMLDFEDWMWSKFGRRYCHPCDRAMYLDWDSGKTHLYS 822
L V D I + K +PM+ +E +W++ G+RYC P +R L+ DSG TH Y
Sbjct: 160 GESLVEEVISGDQI--RKWKDLPMVSYEAAVWNRLGQRYCSPKERRRPLEGDSGMTHYYQ 217
Query: 821 CYVCSDGGYQFKGPYLDTKKTHLQRAIGDENVLIVKFAEATDMCNMMSNASITYEKIAEA 642
C+V +DG Y+FKG L+ THL + +GD+NVL VKF + + ++ TY+ IA+
Sbjct: 218 CHVATDGSYKFKGHLLENTGTHLHKVLGDDNVLTVKFDKVLGVETYCNDLYSTYKGIAKN 277
Query: 641 GILVGLRRYRFFVFKDGGKERQKNGKDDNKRVSSGGVKCYFVKRESVAPWDDRDTFLMNY 462
GI+VGLRRYRFFVFKDGGKE +K K VS+ GVKCYF++ +S A D ++ ++
Sbjct: 278 GIMVGLRRYRFFVFKDGGKEEKK------KDVSTKGVKCYFIRTDSTASIDMQNPYIFAG 331
Query: 461 KTTHDVRCLFMHVHMVSSMAKYIARFSLILSTTIKLQVDLALVSVEEIEDIPCIDEKGCI 282
K+ H+ R FMHV+ +SS+ Y++RFSLILS T L+VD+ ++ E+I+DI C D+
Sbjct: 332 KSMHEARMHFMHVNTLSSLPNYMSRFSLILSKTKTLEVDMTGITFEQIDDIHCHDQDDKD 391
Query: 281 VYDEDGEPQILTDGTGFISENLAVLVPDNFYNAKYMKDTDYKKLDLVQTEIGSVGLRGKE 102
V D++G+P I +DGTG+ISE+LA + P N + K M+ + + +L G+
Sbjct: 392 VLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNL--------NFEGQG 443
Query: 101 ALVKEPPLLIQCRLYNEGFAVKGTLLVNKKLKP 3
+EPPLLIQ R++ G+AVKGT L NKKL P
Sbjct: 444 PCGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPP 476