BLASTX nr result

ID: Atractylodes22_contig00014409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014409
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|2...   124   2e-45
ref|XP_002523079.1| arginine/serine-rich splicing factor, putati...   125   4e-45
dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]    116   2e-42
emb|CBI39508.3| unnamed protein product [Vitis vinifera]              132   9e-29
ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   132   9e-29

>ref|XP_002302710.1| predicted protein [Populus trichocarpa] gi|222844436|gb|EEE81983.1|
           predicted protein [Populus trichocarpa]
          Length = 252

 Score =  124 bits (312), Expect(2) = 2e-45
 Identities = 66/117 (56%), Positives = 75/117 (64%)
 Frame = +1

Query: 205 DFFHVYLQVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGLPSSASWQDLKD 384
           DF    L+VELAH                              V+VTGLPSSASWQDLKD
Sbjct: 69  DFDGHRLRVELAHGGRGHSSSDRHSSYSGGRGRGGASRRSEYRVVVTGLPSSASWQDLKD 128

Query: 385 HMRRAGDVCFSQVFRDRDGMRGIVDYTHYDDMRYAIRKLDDSLFRNQFSKAYIWVCE 555
           HMRRAGDVCFSQVFRD  G  GIVDYT+Y+DM+YAI+K+DDS FRN FS+AY+ V E
Sbjct: 129 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKIDDSEFRNAFSQAYVRVRE 185



 Score = 84.7 bits (208), Expect(2) = 2e-45
 Identities = 38/41 (92%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   DLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYKFDGHRLRV 124
           DLKIPPRPPGYAFVEFE+ RDAEDAIRGRDGY FDGHRLRV
Sbjct: 37  DLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRV 77


>ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537641|gb|EEF39264.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 292

 Score =  125 bits (314), Expect(2) = 4e-45
 Identities = 67/117 (57%), Positives = 75/117 (64%)
 Frame = +1

Query: 205 DFFHVYLQVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGLPSSASWQDLKD 384
           DF    L+VELAH                              VLVTGLPSSASWQDLKD
Sbjct: 69  DFDGHQLRVELAHGGRGHSSSDRHSSHSGGGRGRGVSRRSEYRVLVTGLPSSASWQDLKD 128

Query: 385 HMRRAGDVCFSQVFRDRDGMRGIVDYTHYDDMRYAIRKLDDSLFRNQFSKAYIWVCE 555
           HMRRAGDVCFSQVFRD  G  GIVDYT+Y+DM++AI+KLDDS FRN FS+AY+ V E
Sbjct: 129 HMRRAGDVCFSQVFRDGSGTTGIVDYTNYEDMKHAIKKLDDSEFRNAFSRAYVRVKE 185



 Score = 83.2 bits (204), Expect(2) = 4e-45
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   DLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYKFDGHRLRV 124
           DLKIPPRPPGYAFVEFE+ RDAEDAIRGRDGY FDGH+LRV
Sbjct: 37  DLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHQLRV 77


>dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 255

 Score =  116 bits (290), Expect(2) = 2e-42
 Identities = 63/117 (53%), Positives = 71/117 (60%)
 Frame = +1

Query: 205 DFFHVYLQVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGLPSSASWQDLKD 384
           DF    L+VELAH                              V+V GLPSSASWQDLKD
Sbjct: 69  DFDGYRLRVELAHGGKAQSYSYDRPSSFSSGRRGGVSRRSEYRVMVDGLPSSASWQDLKD 128

Query: 385 HMRRAGDVCFSQVFRDRDGMRGIVDYTHYDDMRYAIRKLDDSLFRNQFSKAYIWVCE 555
           HMRRAGDVCFS V+R+     GIVDYT+YDDM+YAIRKLD + FRN FS+AYI V E
Sbjct: 129 HMRRAGDVCFSDVYREAGATVGIVDYTNYDDMKYAIRKLDGTEFRNAFSRAYIRVRE 185



 Score = 83.2 bits (204), Expect(2) = 2e-42
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = +2

Query: 2   DLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYKFDGHRLRV 124
           DLKIPPRPPGYAFVEFEDPRDA+DAI GRDGY FDG+RLRV
Sbjct: 37  DLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRV 77


>emb|CBI39508.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  132 bits (333), Expect = 9e-29
 Identities = 64/74 (86%), Positives = 68/74 (91%)
 Frame = +1

Query: 334 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRDGMRGIVDYTHYDDMRYAIRKLDDSL 513
           VLVTGLP SASWQDLKDHMRRAGDVCFSQVFR R GM GIVDYT+YDDM+YAIRKLDDSL
Sbjct: 112 VLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSL 171

Query: 514 FRNQFSKAYIWVCE 555
           F+NQFS+AYI V E
Sbjct: 172 FKNQFSRAYIRVRE 185



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +2

Query: 2   DLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYKFDGHRLRV 124
           DLKIPPRPPGYAFVEFED RDAEDAI GRDGY FDGHRLRV
Sbjct: 37  DLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRV 77


>ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
          Length = 288

 Score =  132 bits (333), Expect = 9e-29
 Identities = 64/74 (86%), Positives = 68/74 (91%)
 Frame = +1

Query: 334 VLVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDRDGMRGIVDYTHYDDMRYAIRKLDDSL 513
           VLVTGLP SASWQDLKDHMRRAGDVCFSQVFR R GM GIVDYT+YDDM+YAIRKLDDSL
Sbjct: 112 VLVTGLPYSASWQDLKDHMRRAGDVCFSQVFRGRGGMTGIVDYTNYDDMKYAIRKLDDSL 171

Query: 514 FRNQFSKAYIWVCE 555
           F+NQFS+AYI V E
Sbjct: 172 FKNQFSRAYIRVRE 185



 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 38/41 (92%), Positives = 38/41 (92%)
 Frame = +2

Query: 2   DLKIPPRPPGYAFVEFEDPRDAEDAIRGRDGYKFDGHRLRV 124
           DLKIPPRPPGYAFVEFED RDAEDAI GRDGY FDGHRLRV
Sbjct: 37  DLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRV 77


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