BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012400
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana] gi|1...   174   5e-42
ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana] g...   174   5e-42
emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]     171   4e-41
ref|XP_002883470.1| hypothetical protein ARALYDRAFT_898932 [Arab...   171   7e-41
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA
           topoisomerase 2; AltName: Full=DNA topoisomerase II
           gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis
           thaliana] gi|9294657|dbj|BAB03006.1| DNA topoisomerase
           II [Arabidopsis thaliana] gi|332643305|gb|AEE76826.1|
           DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/124 (70%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
 Frame = +1

Query: 1   VSLADGHFEQVILLNNIVTIKGGTHVDY----ITNHIVAVVKKQNKH--VKAHNVKNYLW 162
           VSL++G F+QV  +N+I TIKGGTHVDY    ITNHIVA V K+NK+  VKAHNVKN+LW
Sbjct: 304 VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLW 363

Query: 163 VFVNALIDNPAFDSQTKETLTIKQSSFGSTCELTPEFLKKVAKSDIVKRVVSWVQFKQQN 342
           VFVNALIDNPAFDSQTKETLT++QSSFGS CEL+ +FLKKV KS +V+ ++SW  FKQ  
Sbjct: 364 VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVGKSGVVENLLSWADFKQNK 423

Query: 343 DLKK 354
           DLKK
Sbjct: 424 DLKK 427


>ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|332643306|gb|AEE76827.1| DNA topoisomerase 2
           [Arabidopsis thaliana]
          Length = 1438

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/124 (70%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
 Frame = +1

Query: 1   VSLADGHFEQVILLNNIVTIKGGTHVDY----ITNHIVAVVKKQNKH--VKAHNVKNYLW 162
           VSL++G F+QV  +N+I TIKGGTHVDY    ITNHIVA V K+NK+  VKAHNVKN+LW
Sbjct: 304 VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLW 363

Query: 163 VFVNALIDNPAFDSQTKETLTIKQSSFGSTCELTPEFLKKVAKSDIVKRVVSWVQFKQQN 342
           VFVNALIDNPAFDSQTKETLT++QSSFGS CEL+ +FLKKV KS +V+ ++SW  FKQ  
Sbjct: 364 VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVGKSGVVENLLSWADFKQNK 423

Query: 343 DLKK 354
           DLKK
Sbjct: 424 DLKK 427


>emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/124 (69%), Positives = 100/124 (80%), Gaps = 6/124 (4%)
 Frame = +1

Query: 1   VSLADGHFEQVILLNNIVTIKGGTHVDY----ITNHIVAVVKKQNKH--VKAHNVKNYLW 162
           VSL+DG F+QV  +N I TIKGGTHV+Y    ITNH++ +V K+NK+  +KAHNVKNYLW
Sbjct: 304 VSLSDGQFQQVSFVNGIATIKGGTHVNYVTDQITNHVMNIVNKKNKNANLKAHNVKNYLW 363

Query: 163 VFVNALIDNPAFDSQTKETLTIKQSSFGSTCELTPEFLKKVAKSDIVKRVVSWVQFKQQN 342
           VFVNALIDNPAFDSQTKETLTI+ +SFGS CELTP FL KVAKS IV  ++SW  FKQ  
Sbjct: 364 VFVNALIDNPAFDSQTKETLTIRPNSFGSKCELTPAFLNKVAKSGIVDSLLSWANFKQNK 423

Query: 343 DLKK 354
           DLKK
Sbjct: 424 DLKK 427


>ref|XP_002883470.1| hypothetical protein ARALYDRAFT_898932 [Arabidopsis lyrata subsp.
           lyrata] gi|297329310|gb|EFH59729.1| hypothetical protein
           ARALYDRAFT_898932 [Arabidopsis lyrata subsp. lyrata]
          Length = 1432

 Score =  171 bits (432), Expect = 7e-41
 Identities = 85/124 (68%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
 Frame = +1

Query: 1   VSLADGHFEQVILLNNIVTIKGGTHVDY----ITNHIVAVVKKQNKH--VKAHNVKNYLW 162
           VSL++G F+QV  +N+I TIKGGTHVDY    ITN+IV VV K+NK+  VKAHNVKN+LW
Sbjct: 302 VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNYIVGVVNKKNKNANVKAHNVKNHLW 361

Query: 163 VFVNALIDNPAFDSQTKETLTIKQSSFGSTCELTPEFLKKVAKSDIVKRVVSWVQFKQQN 342
           VFVNALIDNPAFDSQTKETLT++QSSFGS CEL+ +FLKKV KS +V+ ++SW  FK+  
Sbjct: 362 VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVGKSGVVENLLSWADFKKSK 421

Query: 343 DLKK 354
           DLKK
Sbjct: 422 DLKK 425


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/124 (66%), Positives = 99/124 (79%), Gaps = 6/124 (4%)
 Frame = +1

Query: 1   VSLADGHFEQVILLNNIVTIKGGTHVDYITNHIVAVV------KKQNKHVKAHNVKNYLW 162
           VSL +G F+QV  +N+I TIKGGTHVDY+TN I   V      K +N ++KAHNVKNYLW
Sbjct: 280 VSLTEGQFQQVSFVNSIATIKGGTHVDYVTNQITNYVMNAVNKKHKNSNIKAHNVKNYLW 339

Query: 163 VFVNALIDNPAFDSQTKETLTIKQSSFGSTCELTPEFLKKVAKSDIVKRVVSWVQFKQQN 342
           VFVN LIDNPAFDSQTKETLT++QSSFGS CEL+ +FLKKVAKSDIV  ++SW +FK+  
Sbjct: 340 VFVNCLIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKSDIVDNLLSWAKFKESK 399

Query: 343 DLKK 354
           +LKK
Sbjct: 400 ELKK 403