BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012207
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33876.3| unnamed protein product [Vitis vinifera]              218   2e-54
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   218   2e-54
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   201   3e-49
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   200   5e-49
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   200   5e-49

>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/219 (54%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
 Frame = +3

Query: 195 PLPI-----STKFRV-LSSSSAAIQGEVSIEQEEKPQIEILQKRLFVLNLPWSYSVDELK 356
           PLP+     +TKF   L SS   I+ E   EQ ++P     +++LFVLNLPWS SV ++K
Sbjct: 20  PLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPN---QKRKLFVLNLPWSLSVVDIK 76

Query: 357 NLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAK 536
           NLFGECGTV D EII ++KDG+SRGYAFVTM S EEA +V++K+DSYEL GRIIRVEFAK
Sbjct: 77  NLFGECGTVTDVEII-KQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAK 135

Query: 537 DSKKTSXXXXXX-----SGEKRYKLYVSNLAWKARANHLRDFFAAEFNPTSTRVVFETPE 701
             KK S           +GE R+KLYVSNLAWK R+ HLR+FF++ FNP S RVVF++P 
Sbjct: 136 RFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPS 195

Query: 702 GRSAGYGFVTFXXXXXXXXXXXXFNGKELLGRPITVAFS 818
           GRS GYGF +F             +GKEL+GRP+ + FS
Sbjct: 196 GRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFS 234


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/219 (54%), Positives = 150/219 (68%), Gaps = 11/219 (5%)
 Frame = +3

Query: 195 PLPI-----STKFRV-LSSSSAAIQGEVSIEQEEKPQIEILQKRLFVLNLPWSYSVDELK 356
           PLP+     +TKF   L SS   I+ E   EQ ++P     +++LFVLNLPWS SV ++K
Sbjct: 50  PLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPN---QKRKLFVLNLPWSLSVVDIK 106

Query: 357 NLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAK 536
           NLFGECGTV D EII ++KDG+SRGYAFVTM S EEA +V++K+DSYEL GRIIRVEFAK
Sbjct: 107 NLFGECGTVTDVEII-KQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAK 165

Query: 537 DSKKTSXXXXXX-----SGEKRYKLYVSNLAWKARANHLRDFFAAEFNPTSTRVVFETPE 701
             KK S           +GE R+KLYVSNLAWK R+ HLR+FF++ FNP S RVVF++P 
Sbjct: 166 RFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPS 225

Query: 702 GRSAGYGFVTFXXXXXXXXXXXXFNGKELLGRPITVAFS 818
           GRS GYGF +F             +GKEL+GRP+ + FS
Sbjct: 226 GRSGGYGFASFATKEEAEAAISALDGKELMGRPVHLKFS 264


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  201 bits (511), Expect = 3e-49
 Identities = 108/215 (50%), Positives = 143/215 (66%), Gaps = 6/215 (2%)
 Frame = +3

Query: 204 ISTKFRVLSSSSAAIQGEVSIEQEEKPQIEILQKRLFVLNLPWSYSVDELKNLFGECGTV 383
           +S    V    ++A +     E+ E+ Q   L+++LFV NLPWS SV+++  LFG+CGTV
Sbjct: 62  VSVLCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTV 121

Query: 384 EDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTSXXX 563
            + EII R+KDGK+RG+AFVTMAS EEA + I K+D++++ GRII V FA+  KK +   
Sbjct: 122 NNVEII-RQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKS 180

Query: 564 XXX-----SGEKRYKLYVSNLAWKARANHLRDFF-AAEFNPTSTRVVFETPEGRSAGYGF 725
                    G+ R+KLYVSNLAWKAR+ HLR+ F AA+FNP S RVVF  PEGRS+GYGF
Sbjct: 181 PNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGF 240

Query: 726 VTFXXXXXXXXXXXXFNGKELLGRPITVAFSERGA 830
           V+F             NGKE++GRPIT+ FS R A
Sbjct: 241 VSFATREEAENAITKLNGKEIMGRPITLKFSLRSA 275


>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 288

 Score =  200 bits (509), Expect = 5e-49
 Identities = 104/193 (53%), Positives = 136/193 (70%), Gaps = 3/193 (1%)
 Frame = +3

Query: 255 EVSIEQEEKPQIEILQKR-LFVLNLPWSYSVDELKNLFGECGTVEDAEIITRKKDGKSRG 431
           EV++E+  +   ++ QKR L++ NLPWS SV ++K LFG+CGTV D EII ++K+G+SRG
Sbjct: 77  EVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEII-KQKNGRSRG 135

Query: 432 YAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTSXXXXXXS--GEKRYKLYVS 605
           +AFVTMAS +EA + IQK+DS E+ GR+I+VEFAK  KK           GE   KLYVS
Sbjct: 136 FAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVS 195

Query: 606 NLAWKARANHLRDFFAAEFNPTSTRVVFETPEGRSAGYGFVTFXXXXXXXXXXXXFNGKE 785
           NLAWK R+N+LRDFF+  FNP + RVVF++P GRSAGYGFV+F              GKE
Sbjct: 196 NLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKE 255

Query: 786 LLGRPITVAFSER 824
           L+GRP+ + FSER
Sbjct: 256 LMGRPLRLKFSER 268


>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
           sativus]
          Length = 282

 Score =  200 bits (509), Expect = 5e-49
 Identities = 104/193 (53%), Positives = 136/193 (70%), Gaps = 3/193 (1%)
 Frame = +3

Query: 255 EVSIEQEEKPQIEILQKR-LFVLNLPWSYSVDELKNLFGECGTVEDAEIITRKKDGKSRG 431
           EV++E+  +   ++ QKR L++ NLPWS SV ++K LFG+CGTV D EII ++K+G+SRG
Sbjct: 71  EVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVEII-KQKNGRSRG 129

Query: 432 YAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTSXXXXXXS--GEKRYKLYVS 605
           +AFVTMAS +EA + IQK+DS E+ GR+I+VEFAK  KK           GE   KLYVS
Sbjct: 130 FAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVS 189

Query: 606 NLAWKARANHLRDFFAAEFNPTSTRVVFETPEGRSAGYGFVTFXXXXXXXXXXXXFNGKE 785
           NLAWK R+N+LRDFF+  FNP + RVVF++P GRSAGYGFV+F              GKE
Sbjct: 190 NLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKE 249

Query: 786 LLGRPITVAFSER 824
           L+GRP+ + FSER
Sbjct: 250 LMGRPLRLKFSER 262