BLASTX nr result

ID: Atractylodes22_contig00012162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012162
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250...   338   3e-90
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu...   328   2e-87
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   319   1e-84
ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   314   5e-83

>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
            vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
            uncharacterized protein LOC100250148 isoform 2 [Vitis
            vinifera]
          Length = 368

 Score =  338 bits (866), Expect = 3e-90
 Identities = 179/307 (58%), Positives = 215/307 (70%), Gaps = 2/307 (0%)
 Frame = -3

Query: 1329 RYWCHECCRVVDPIREVESIKCSLCHGGFVEDIDGIRTDHQQQHDGGSDSDRALSLWAPI 1150
            RYWCH C +VV+PI E E  KC LC  GF+EDIDG  +      D    SDR LSLWAPI
Sbjct: 8    RYWCHSCSQVVNPIAEAEP-KCPLCQDGFIEDIDGTASRDHNDSDSDLASDRTLSLWAPI 66

Query: 1149 LLGMMSTPRRHRRLRQLGFDEQNEEEGRRDSEEHRHQGGESELDPEHESI--RRRRNSTA 976
            LLGMM  PRR RR R+   D ++EEE   D E  R  GGE+ELD E +SI  RRRR+S  
Sbjct: 67   LLGMMGNPRRRRRFRRE--DIEDEEEDNEDGEGRR--GGETELDRELDSIIRRRRRSSAT 122

Query: 975  ILHLLQGIRAGMVXXXXXXXXXXXXXNREPDRDHERERVILINPFNQTIIVHSGGSGNPF 796
            IL LLQGIRAGMV              R+ +R+ ERER+ILINPFNQTIIV   GS +  
Sbjct: 123  ILQLLQGIRAGMVSESENSENDRDRD-RDRERERERERLILINPFNQTIIVQ--GSFDSN 179

Query: 795  DSSNPSQNHPFGPLGDYFMGPGLEQLLQHLAENDPNRYGTQPAQKEAVEAMPTVTIEEDS 616
             + N +QN   G LGDYF+GP L+ LLQHLAENDPNRYGT PAQK+A+EAMPTV I+E+ 
Sbjct: 180  QAQNQNQN-TIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKEN- 237

Query: 615  IQCSICLEEFEVGSKAREMPCKHRFHGDCILPWLELHCSCPVCRYELPADESKMDGLXXX 436
            +QCS+CL++FE+G++AREMPCKH+FH  CILPWLELH SCPVCR+++ ADESK+D     
Sbjct: 238  LQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLDSDASP 297

Query: 435  XSMGNSN 415
                NS+
Sbjct: 298  NVSSNSS 304


>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
            gi|223537345|gb|EEF38974.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 394

 Score =  328 bits (842), Expect = 2e-87
 Identities = 174/300 (58%), Positives = 212/300 (70%), Gaps = 5/300 (1%)
 Frame = -3

Query: 1335 STRYWCHECCRVVDPIREVESIKCSLCHGGFVEDIDGIRTDHQQQHDGGSDSDRALSLWA 1156
            + RYWC+ C ++V+PI E E IKC  C GGFVE++     D+Q+  D    SDRALSLWA
Sbjct: 6    AARYWCYLCSQMVNPIMEAE-IKCPFCLGGFVEEMSSNTRDNQEP-DSDFSSDRALSLWA 63

Query: 1155 PILLGMMSTPRRHRRLRQLGFDEQNEEEGRRDSEEHRHQGGESELDPEHESI--RRRRNS 982
            P+LLGMM  PRR RRLR+  F+E +++    D  E RH GGE ++D E ES   RRRR+S
Sbjct: 64   PVLLGMMGNPRRRRRLRRREFEEDDDDN---DDGETRH-GGEIDIDRELESFMRRRRRSS 119

Query: 981  TAILHLLQGIRAGMVXXXXXXXXXXXXXN-REPDRDHERERVILINPFNQTIIVHSGGSG 805
              IL LLQGIRAGM                R+ +RD ER+RVILINP N+TII       
Sbjct: 120  ATILQLLQGIRAGMASESENSEGDRDRDGDRDRERDRERDRVILINPSNRTIIFQGS--- 176

Query: 804  NPFDSSNPS--QNHPFGPLGDYFMGPGLEQLLQHLAENDPNRYGTQPAQKEAVEAMPTVT 631
              +DSSN     N P G LGDYF+GPGL+ LLQHLAENDPNRYGT PAQKEA+EA+PTVT
Sbjct: 177  --YDSSNGQGQNNAPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVT 234

Query: 630  IEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPWLELHCSCPVCRYELPADESKMD 451
            I+  S QCS+CL++FE+G++A+EMPCKHRFH  CILPWLELH SCPVCR++LPA+ESK D
Sbjct: 235  IKNTS-QCSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSSCPVCRFQLPAEESKFD 293


>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449519040|ref|XP_004166543.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 362

 Score =  319 bits (818), Expect = 1e-84
 Identities = 170/308 (55%), Positives = 211/308 (68%), Gaps = 13/308 (4%)
 Frame = -3

Query: 1335 STRYWCHECCRVVDPIREVESIKCSLCHGGFVEDI-DGIRTDHQQQHDGGSD-------- 1183
            +TRYWCH C ++V+PI +VE IKC  C  GFVE+I +GI +D+   ++  ++        
Sbjct: 6    ATRYWCHMCSQMVNPIVDVE-IKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNELESDF 64

Query: 1182 -SDRALSLWAPILLGMMSTPRRHRRLRQLGFDEQNEEEGRRDSEEHRHQGGESELDPEHE 1006
             S+RALSLWAPILLGMM  PR  RR R L FD+ +++    D E +R     +ELD    
Sbjct: 65   GSERALSLWAPILLGMMGNPRGRRRFRHLEFDDDDDDNEHEDGEGNRVSSETTELD---S 121

Query: 1005 SIRRRRNSTAILHLLQGIRAGMVXXXXXXXXXXXXXNREPDRDHERERVILINPFNQTII 826
             IRRRR+S  IL LLQGIRAG+                E +R  ERERVILINPFNQTI+
Sbjct: 122  VIRRRRSSATILQLLQGIRAGIATAESENSY-------EGERSRERERVILINPFNQTIV 174

Query: 825  VHSGGSGNPFDSSNPSQNHPFGPLGDYFMGPGLEQLLQHLAENDPNRYGTQPAQKEAVEA 646
            V  G      ++ N +QN   G LGDYF+GPGL+ LLQH+AENDPNRYGT PAQKEAV+A
Sbjct: 175  VQGG------ENQNQNQNS-IGSLGDYFVGPGLDLLLQHIAENDPNRYGTPPAQKEAVDA 227

Query: 645  MPTVTIE--EDS-IQCSICLEEFEVGSKAREMPCKHRFHGDCILPWLELHCSCPVCRYEL 475
            +PTV +E  EDS +QCS+CL+EFEV  +A+EMPCKH+FH  CILPWLELH SCPVCR++L
Sbjct: 228  LPTVRVELEEDSCLQCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQL 287

Query: 474  PADESKMD 451
            P DESK D
Sbjct: 288  PGDESKRD 295


>ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|222841411|gb|EEE78958.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  318 bits (815), Expect = 2e-84
 Identities = 169/300 (56%), Positives = 210/300 (70%), Gaps = 5/300 (1%)
 Frame = -3

Query: 1335 STRYWCHECCRVVDPIREVESIKCSLCHGGFVEDIDGIRTDHQQQHDGGSDSDRALSLWA 1156
            + RYWCH C ++V+PI  VE IKC  C  GF+ED+     D+Q   D    SDRALSLWA
Sbjct: 2    AARYWCHMCSQMVNPIMGVE-IKCPFCQNGFIEDMIDSTGDNQVP-DSEFGSDRALSLWA 59

Query: 1155 PILLGMMSTPRRHRRLRQLGFDEQNEEEGRRDSEEHRHQGGESELDPEHESIRRRR---- 988
            PILLGM+    R RRLR++ ++E  +E+G  D E +    GE E + E ES  RRR    
Sbjct: 60   PILLGMVGNSHRRRRLRRVEYEE--DEDGNDDGEANH--AGEPEFEREIESFMRRRRRSR 115

Query: 987  -NSTAILHLLQGIRAGMVXXXXXXXXXXXXXNREPDRDHERERVILINPFNQTIIVHSGG 811
             NS  IL LLQGIRAG++             +R  D + ERERVILINPFNQ+IIV   G
Sbjct: 116  RNSATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQ--G 173

Query: 810  SGNPFDSSNPSQNHPFGPLGDYFMGPGLEQLLQHLAENDPNRYGTQPAQKEAVEAMPTVT 631
            S +  +  N +QN   G LGDY +GPGL+ LLQHLAENDPNRYGT PAQKEA+EA+PTVT
Sbjct: 174  SYDSNNVQNQNQN-AIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVT 232

Query: 630  IEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPWLELHCSCPVCRYELPADESKMD 451
            ++E  +QCS+CL++FE+G++AREMPCKH+FH  CILPWLELH SCPVCR++LPADESK+D
Sbjct: 233  VKEP-LQCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLD 291


>ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 344

 Score =  314 bits (804), Expect = 5e-83
 Identities = 170/300 (56%), Positives = 199/300 (66%), Gaps = 5/300 (1%)
 Frame = -3

Query: 1335 STRYWCHECCRVVDPIREVESIKCSLCHGGFVEDIDGIRTDHQQQHDGGSD--SDRALSL 1162
            + RYWCH C ++V+PI ++E I+C  C  GFVE++    +     +   SD  SDRALSL
Sbjct: 2    AARYWCHMCSQMVNPIMDME-IRCPFCQSGFVEEMGNTPSSSSIPNTSESDFESDRALSL 60

Query: 1161 WAPILLGMMSTPRRHRRLRQLGFDEQNEE--EGRRDSEEHRHQGGESELDPEHESI-RRR 991
            WAPILLGMM  PR  RRLRQ+  D  N +  +G  D       G E+E D E ESI RRR
Sbjct: 61   WAPILLGMMGNPRHPRRLRQIANDNGNRDYVDGVAD------HGRETEYDQEFESILRRR 114

Query: 990  RNSTAILHLLQGIRAGMVXXXXXXXXXXXXXNREPDRDHERERVILINPFNQTIIVHSGG 811
            RNS  IL LLQGIR G+               RE +R+ ERE +ILINP NQTIIV    
Sbjct: 115  RNSATILQLLQGIRTGLASESYENTDGHDHD-REREREREREHMILINPLNQTIIVQGSY 173

Query: 810  SGNPFDSSNPSQNHPFGPLGDYFMGPGLEQLLQHLAENDPNRYGTQPAQKEAVEAMPTVT 631
              N   S N S     G LGDYF GPG + LLQHLAENDPNRYGT PAQKEA+EA+PTV 
Sbjct: 174  ESNRDQSDNHSS---VGSLGDYFTGPGFDILLQHLAENDPNRYGTPPAQKEAIEALPTVI 230

Query: 630  IEEDSIQCSICLEEFEVGSKAREMPCKHRFHGDCILPWLELHCSCPVCRYELPADESKMD 451
            I E+S QCS+CL++FEVGS+A+EMPCKHRFH  CILPWLELH SCPVCR +LP DESK D
Sbjct: 231  INENS-QCSVCLDDFEVGSEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQLPLDESKQD 289


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