BLASTX nr result

ID: Atractylodes22_contig00012149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012149
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   190   3e-46
emb|CBI36847.3| unnamed protein product [Vitis vinifera]              188   8e-46
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   188   8e-46
emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]   188   8e-46
gb|ABR18062.1| unknown [Picea sitchensis]                             187   2e-45

>ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
           gi|449498497|ref|XP_004160553.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like [Cucumis sativus]
          Length = 309

 Score =  190 bits (482), Expect = 3e-46
 Identities = 94/127 (74%), Positives = 99/127 (77%)
 Frame = -1

Query: 718 RGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLVTGLPSS 539
           RGRDGYDFDGHRLRVELAHGGRG                         DYRVLVTGLPSS
Sbjct: 63  RGRDGYDFDGHRLRVELAHGGRGHSSSNDRYSSHGGSRGGRGVSRRS-DYRVLVTGLPSS 121

Query: 538 ASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGV 359
           ASWQDLKDHMRRAGDVCFSQVF++G GTTGIVDYTNYDDMKYAI+KLDDSEFRNAFSR  
Sbjct: 122 ASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRAY 181

Query: 358 IRVKEYD 338
           +RV+EYD
Sbjct: 182 VRVREYD 188


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  188 bits (478), Expect = 8e-46
 Identities = 94/127 (74%), Positives = 98/127 (77%)
 Frame = -1

Query: 718 RGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLVTGLPSS 539
           RGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLPSS
Sbjct: 63  RGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLPSS 121

Query: 538 ASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGV 359
           ASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR  
Sbjct: 122 ASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAY 181

Query: 358 IRVKEYD 338
           +RVKEYD
Sbjct: 182 VRVKEYD 188


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score =  188 bits (478), Expect = 8e-46
 Identities = 94/127 (74%), Positives = 98/127 (77%)
 Frame = -1

Query: 718 RGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLVTGLPSS 539
           RGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLPSS
Sbjct: 63  RGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLPSS 121

Query: 538 ASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGV 359
           ASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR  
Sbjct: 122 ASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAY 181

Query: 358 IRVKEYD 338
           +RVKEYD
Sbjct: 182 VRVKEYD 188


>emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
          Length = 720

 Score =  188 bits (478), Expect = 8e-46
 Identities = 94/127 (74%), Positives = 98/127 (77%)
 Frame = -1

Query: 718 RGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLVTGLPSS 539
           RGRDGYDFDGHRLRVELAHGGRG                         +YRVLVTGLPSS
Sbjct: 63  RGRDGYDFDGHRLRVELAHGGRGHSSSIDRHSHSSGRGGRGGASRRS-EYRVLVTGLPSS 121

Query: 538 ASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGV 359
           ASWQDLKDHMRRAGDVCFSQVF +GGGT GIVDYTNYDDMK+AIRKLDDSEFRNAFSR  
Sbjct: 122 ASWQDLKDHMRRAGDVCFSQVFHDGGGTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAY 181

Query: 358 IRVKEYD 338
           +RVKEYD
Sbjct: 182 VRVKEYD 188


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score =  187 bits (474), Expect = 2e-45
 Identities = 93/126 (73%), Positives = 99/126 (78%)
 Frame = -1

Query: 718 RGRDGYDFDGHRLRVELAHGGRGXXXXXXXXXXXXXXXXXXXXXXXXSDYRVLVTGLPSS 539
           RGRDGY+FDG+RLRVELAHGGRG                        S+YRVLV+GLPSS
Sbjct: 63  RGRDGYNFDGNRLRVELAHGGRGQSSTNDRYSSYSSAGGRSGGVSRRSEYRVLVSGLPSS 122

Query: 538 ASWQDLKDHMRRAGDVCFSQVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGV 359
           ASWQDLKDHMRRAGDVCFSQVF++  GTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRG 
Sbjct: 123 ASWQDLKDHMRRAGDVCFSQVFRDSSGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGY 182

Query: 358 IRVKEY 341
           IRVKEY
Sbjct: 183 IRVKEY 188


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