BLASTX nr result

ID: Atractylodes22_contig00012115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00012115
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...   503   e-140
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]   483   e-134
ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cu...   474   e-131
ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cu...   471   e-130
ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|2...   456   e-125

>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
            gi|296089601|emb|CBI39420.3| unnamed protein product
            [Vitis vinifera]
          Length = 390

 Score =  503 bits (1294), Expect = e-140
 Identities = 271/386 (70%), Positives = 303/386 (78%), Gaps = 12/386 (3%)
 Frame = -2

Query: 1482 SVTRSAFLTHLLATDLKNQPLNCNSPTNHL--------FICRTPKRPSPSFSFSTPKVSV 1327
            SVT  + L+ L   D  +   N NS  + L        F  R+P R SP F  +T +VS 
Sbjct: 9    SVTGLSILSKLFCWDSSS---NTNSSASLLINPSKISSFYRRSPLRRSP-FHIATARVST 64

Query: 1326 SGDNSKPAXXXXXXXXD---VVRQARRSADWKAARAHYDNGIQYQGRVEGSNGGGLLVRF 1156
             G     A             +RQARRSADWKAARAH ++G  Y+GR+EG NGGGLLVRF
Sbjct: 65   EGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRF 124

Query: 1155 YSLVGFLPFPQLSPSHSCKEPDKSIQEIAKALTGSLISVKVIHAEEEKRKLIFSEKEAIW 976
            YSLVGFLPFPQLSPSHSCKEP K+IQEIAK L GSLISVKVI A+EEKRKLIFSEKEA W
Sbjct: 125  YSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAW 184

Query: 975  SKYSNAVKIGNVYQARVGSVEDYGAFAHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDILN 796
             K+S  + IG++++A VGSVEDYGAF HLRFPDGLYHLTGLVHVSEVSWDLVQDVRD+LN
Sbjct: 185  LKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDVLN 244

Query: 795  EGDEVKVKVIGVDRNKSRITLSIKQLEEDPLLETLEKVIPQDGSTG-SSLHSSTDYVIDP 619
            EGDEV+VK++ VDR KSRITLSIKQLEEDPLLETL+KVIPQDGSTG  SL +S  Y I+P
Sbjct: 245  EGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSLRTSDSYDIEP 304

Query: 618  LPGLETIVEELLREDGIIDVKITRQGFEKRVVSQDLQLWLSNAPPNGNQFTLLARAGRQV 439
            LPGLETI EELL+E+GI DV+I+RQGFEKRVVSQDLQLWLSNAP    QFTLLARAGRQV
Sbjct: 305  LPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLARAGRQV 364

Query: 438  QEIQLVTSLDQDGIKSALQRVLERVP 361
            QEIQL TSLDQ+GIK ALQRVLERVP
Sbjct: 365  QEIQLTTSLDQEGIKKALQRVLERVP 390


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score =  483 bits (1244), Expect = e-134
 Identities = 271/414 (65%), Positives = 303/414 (73%), Gaps = 40/414 (9%)
 Frame = -2

Query: 1482 SVTRSAFLTHLLATDLKNQPLNCNSPTNHL--------FICRTPKRPSPSFSFSTPKVSV 1327
            SVT  + L+ L   D  +   N NS  + L        F  R+P R SP F  +T +VS 
Sbjct: 9    SVTGLSILSKLFCWDSSS---NTNSSASLLINPSKISSFYRRSPLRRSP-FHIATARVST 64

Query: 1326 SGDNSKPAXXXXXXXXD---VVRQARRSADWKAARAHYDNGIQYQGRVEGSNGGGLLVRF 1156
             G     A             +RQARRSADWKAARAH ++G  Y+GR+EG NGGGLLVRF
Sbjct: 65   EGSEQATAGVVEGSPPPPFDAIRQARRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRF 124

Query: 1155 YSLVGFLPFPQLSPSHSCKEPDKSIQEIAKALTGSLISVKVIHAEEEKRKLIFSEKEAIW 976
            YSLVGFLPFPQLSPSHSCKEP K+IQEIAK L GSLISVKVI A+EEKRKLIFSEKEA W
Sbjct: 125  YSLVGFLPFPQLSPSHSCKEPHKTIQEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAW 184

Query: 975  SKYSNAVKIGNVYQARVGSVEDYGAFAHLRFPD----------GLYHLTGLVHVSEVSWD 826
             K+S  + IG++++A VGSVEDYGAF HLRFPD          GLYHLTGLVHVSEVSWD
Sbjct: 185  LKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTGLVHVSEVSWD 244

Query: 825  LVQDVRDILNEGDEVKVKVIGVDRNKSRITLSIKQLEEDPLLETLEKVIP---------- 676
            LVQDVRD+LNEGDEV+VK++ VDR KSRITLSIKQLEEDPLLETL+KVIP          
Sbjct: 245  LVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQIIFLLHRTK 304

Query: 675  --------QDGSTG-SSLHSSTDYVIDPLPGLETIVEELLREDGIIDVKITRQGFEKRVV 523
                    QDGSTG  SL +S  Y I+PLPGLETI EELL+E+GI DV+I+RQGFEKRVV
Sbjct: 305  SSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVV 364

Query: 522  SQDLQLWLSNAPPNGNQFTLLARAGRQVQEIQLVTSLDQDGIKSALQRVLERVP 361
            SQDLQLWLSNAP    QFTLLARAGRQVQEIQL TSLDQ+GIK ALQRVLERVP
Sbjct: 365  SQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKALQRVLERVP 418


>ref|XP_004156938.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
          Length = 379

 Score =  474 bits (1219), Expect = e-131
 Identities = 257/376 (68%), Positives = 297/376 (78%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1485 SSVTRSAFLTHLLATDLKNQPLNCNSPTNHLFICRTPKRPSPSFSFSTPKVSVSGDNSKP 1306
            +SV+  +FL+ L +T   +   + +S ++  FI    K PS   S    +VS+SG    P
Sbjct: 9    ASVSAHSFLSLLAST---SDASSTSSSSSSSFILPL-KSPSKRSSIFPSRVSLSG-KPDP 63

Query: 1305 AXXXXXXXXDVVRQARRSADWKAARAHYDNGIQYQGRVEGSNGGGLLVRFYSLVGFLPFP 1126
                     + VR+ARRSADWKAAR + D+G  Y+GR+EGSN GGLLVRFYSLVGFLPFP
Sbjct: 64   IAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFP 123

Query: 1125 QLSPSHSCKEPDKSIQEIAKALTGSLISVKVIHAEEEKRKLIFSEKEAIWSKYSNAVKIG 946
            QLSPSHSCKEP KSIQ+IAK+L GSLISVKVI A+E+ RKLIFSEKEA  SK+S  V +G
Sbjct: 124  QLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVG 183

Query: 945  NVYQARVGSVEDYGAFAHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDILNEGDEVKVKVI 766
            +VY+ +VGSVEDYGAF HLR  DGLYHLTGLVHVSEVSWDLVQDVRDIL+EGDEV VKVI
Sbjct: 184  DVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVI 243

Query: 765  GVDRNKSRITLSIKQLEEDPLLETLEKVIPQDGST-GSSLHSSTDYVIDPLPGLETIVEE 589
             V++NKSRITLSI+QLEEDPLLETL+KVIPQD S    S     D  I PLPGLETI+EE
Sbjct: 244  NVNKNKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKGDSEIIPLPGLETIIEE 303

Query: 588  LLREDGIIDVKITRQGFEKRVVSQDLQLWLSNAPPNGNQFTLLARAGRQVQEIQLVTSLD 409
            LL+E+GI+DV++ RQGFEKRVVSQDLQLWLSNAPP   +FTLLARAGRQVQEIQL TSLD
Sbjct: 304  LLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLD 363

Query: 408  QDGIKSALQRVLERVP 361
            Q+GIK ALQRVLERVP
Sbjct: 364  QEGIKRALQRVLERVP 379


>ref|XP_004152109.1| PREDICTED: 30S ribosomal protein S1-like [Cucumis sativus]
          Length = 378

 Score =  471 bits (1213), Expect = e-130
 Identities = 256/376 (68%), Positives = 295/376 (78%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1485 SSVTRSAFLTHLLATDLKNQPLNCNSPTNHLFICRTPKRPSPSFSFSTPKVSVSGDNSKP 1306
            +SV+  +FL+ L +T       +  S ++  FI    K PS   S    +VS+SG    P
Sbjct: 9    ASVSAHSFLSLLASTS----DASSTSSSSSSFILPL-KSPSKRSSIFPSRVSLSG-KPDP 62

Query: 1305 AXXXXXXXXDVVRQARRSADWKAARAHYDNGIQYQGRVEGSNGGGLLVRFYSLVGFLPFP 1126
                     + VR+ARRSADWKAAR + D+G  Y+GR+EGSN GGLLVRFYSLVGFLPFP
Sbjct: 63   IAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLVGFLPFP 122

Query: 1125 QLSPSHSCKEPDKSIQEIAKALTGSLISVKVIHAEEEKRKLIFSEKEAIWSKYSNAVKIG 946
            QLSPSHSCKEP KSIQ+IAK+L GSLISVKVI A+E+ RKLIFSEKEA  SK+S  V +G
Sbjct: 123  QLSPSHSCKEPYKSIQDIAKSLIGSLISVKVIQADEKNRKLIFSEKEAARSKFSGQVAVG 182

Query: 945  NVYQARVGSVEDYGAFAHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDILNEGDEVKVKVI 766
            +VY+ +VGSVEDYGAF HLR  DGLYHLTGLVHVSEVSWDLVQDVRDIL+EGDEV VKVI
Sbjct: 183  DVYEGKVGSVEDYGAFVHLRLSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVI 242

Query: 765  GVDRNKSRITLSIKQLEEDPLLETLEKVIPQDGST-GSSLHSSTDYVIDPLPGLETIVEE 589
             V++NKSRITLSI+QLEEDPLLETL+KVIPQ+ S    S     D  I PLPGLETI+EE
Sbjct: 243  NVNKNKSRITLSIRQLEEDPLLETLDKVIPQESSAEPDSFGPKGDSEIIPLPGLETIIEE 302

Query: 588  LLREDGIIDVKITRQGFEKRVVSQDLQLWLSNAPPNGNQFTLLARAGRQVQEIQLVTSLD 409
            LL+E+GI+DV++ RQGFEKRVVSQDLQLWLSNAPP   +FTLLARAGRQVQEIQL TSLD
Sbjct: 303  LLQEEGIVDVRVNRQGFEKRVVSQDLQLWLSNAPPVEKKFTLLARAGRQVQEIQLTTSLD 362

Query: 408  QDGIKSALQRVLERVP 361
            Q+GIK ALQRVLERVP
Sbjct: 363  QEGIKRALQRVLERVP 378


>ref|XP_002321102.1| predicted protein [Populus trichocarpa] gi|222861875|gb|EEE99417.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  456 bits (1172), Expect = e-125
 Identities = 232/301 (77%), Positives = 258/301 (85%), Gaps = 4/301 (1%)
 Frame = -2

Query: 1251 ADWKAARAHYDNGIQYQGRVEGSNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPDKSIQEI 1072
            ADWKA +A+YD G   QGRVEG NGGGL+VRFYSLVGFLPFP LSPSHSCK+P K+I EI
Sbjct: 1    ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEI 60

Query: 1071 AKALTGSLISVKVIHAEEEKRKLIFSEKEAIWSKYSNAVKIGNVYQARVGSVEDYGAFAH 892
            AK LTG LISVKVIHAEEE RKLIFSEKEA+WSK+S  + +G ++  RVGSVEDYGAF H
Sbjct: 61   AKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGAFIH 120

Query: 891  LRFPDG-LYHLTGLVHVSEVSWDLVQDVRDILNEGDEVKVKVIGVDRNKSRITLSIKQLE 715
            +RFPDG LYHLTGLVHVSEVSWDLVQDVRDILN GDEV VK+I +D+ KSRITLSIKQLE
Sbjct: 121  MRFPDGSLYHLTGLVHVSEVSWDLVQDVRDILNVGDEVTVKIIDIDQGKSRITLSIKQLE 180

Query: 714  EDPLLETLEKVIPQDGSTGS---SLHSSTDYVIDPLPGLETIVEELLREDGIIDVKITRQ 544
            EDPLLETL+KVIPQDGS      S+H+S    I+PLPGLE+I +EL REDGI D++I+RQ
Sbjct: 181  EDPLLETLDKVIPQDGSIAPDPLSMHNS--ITIEPLPGLESIFQELTREDGIDDIRISRQ 238

Query: 543  GFEKRVVSQDLQLWLSNAPPNGNQFTLLARAGRQVQEIQLVTSLDQDGIKSALQRVLERV 364
            GFEKRVVSQDLQLWLSNAPP   +FTLLARAGRQVQEIQL T+LDQ GIK ALQRVLERV
Sbjct: 239  GFEKRVVSQDLQLWLSNAPPINRKFTLLARAGRQVQEIQLTTTLDQGGIKKALQRVLERV 298

Query: 363  P 361
            P
Sbjct: 299  P 299


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