BLASTX nr result

ID: Atractylodes22_contig00011454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011454
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM61462.1| photosystem II [Arabidopsis thaliana]                   60   1e-07
ref|NP_564589.1| Photosystem II 5 kD protein [Arabidopsis thalia...    59   3e-07
ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyr...    59   4e-07
dbj|BAJ34522.1| unnamed protein product [Thellungiella halophila]      58   9e-07
ref|XP_002862672.1| hypothetical protein ARALYDRAFT_920397 [Arab...    56   3e-06

>gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
          Length = 106

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = -2

Query: 244 DDEPKRGSEAAKKKYYPICVTMPTARVCR 158
           DDEPKRG+EAAKKKY P+CVTMPTAR+CR
Sbjct: 77  DDEPKRGTEAAKKKYAPVCVTMPTARICR 105


>ref|NP_564589.1| Photosystem II 5 kD protein [Arabidopsis thaliana]
           gi|4836947|gb|AAD30649.1|AC006085_22 Putative
           photosystem II 5 KD protein [Arabidopsis thaliana]
           gi|12325362|gb|AAG52621.1|AC024261_8 unknown protein;
           88255-88575 [Arabidopsis thaliana]
           gi|14326535|gb|AAK60312.1|AF385721_1 At1g51400/F5D21_10
           [Arabidopsis thaliana] gi|15215584|gb|AAK91337.1|
           At1g51400/F5D21_10 [Arabidopsis thaliana]
           gi|22137316|gb|AAM91503.1| At1g51400/F5D21_10
           [Arabidopsis thaliana] gi|332194541|gb|AEE32662.1|
           Photosystem II 5 kD protein [Arabidopsis thaliana]
          Length = 106

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -2

Query: 244 DDEPKRGSEAAKKKYYPICVTMPTARVCR 158
           DDEPKRG+EAAKKKY P+CVTMPTA++CR
Sbjct: 77  DDEPKRGTEAAKKKYAPVCVTMPTAKICR 105


>ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340155|gb|EFH70572.1| photosystem II 5 kD protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -2

Query: 244 DDEPKRGSEAAKKKYYPICVTMPTARVCR 158
           D+EPKRG+EAAKKKY P+CVTMPTAR+CR
Sbjct: 77  DEEPKRGTEAAKKKYAPVCVTMPTARICR 105


>dbj|BAJ34522.1| unnamed protein product [Thellungiella halophila]
          Length = 106

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = -2

Query: 244 DDEPKRGSEAAKKKYYPICVTMPTARVCR 158
           D+EPKRG+EAAKKKY P+CVTMPTA++CR
Sbjct: 77  DEEPKRGTEAAKKKYAPVCVTMPTAKICR 105


>ref|XP_002862672.1| hypothetical protein ARALYDRAFT_920397 [Arabidopsis lyrata subsp.
           lyrata] gi|297835070|ref|XP_002885417.1| hypothetical
           protein ARALYDRAFT_898540 [Arabidopsis lyrata subsp.
           lyrata] gi|297308332|gb|EFH38930.1| hypothetical protein
           ARALYDRAFT_920397 [Arabidopsis lyrata subsp. lyrata]
           gi|297331257|gb|EFH61676.1| hypothetical protein
           ARALYDRAFT_898540 [Arabidopsis lyrata subsp. lyrata]
          Length = 103

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = -2

Query: 244 DDEPKRGSEAAKKKYYPICVTMPTARVCRY 155
           ++EPKRG+EAAKKKY  +CVTMPTA++CRY
Sbjct: 74  EEEPKRGTEAAKKKYAQVCVTMPTAKICRY 103


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