BLASTX nr result

ID: Atractylodes22_contig00011213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00011213
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34329.1| Integrase core domain containing protein [Solanum...    81   8e-14
emb|CAN77046.1| hypothetical protein VITISV_035257 [Vitis vinifera]    81   1e-13
emb|CAN64167.1| hypothetical protein VITISV_015919 [Vitis vinifera]    81   1e-13
emb|CAH23488.1| reverse transcriptase [Solanum tuberosum]              81   1e-13
emb|CAH23505.1| reverse transcriptase [Solanum tuberosum] gi|573...    81   1e-13

>gb|ABI34329.1| Integrase core domain containing protein [Solanum demissum]
          Length = 1775

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/91 (49%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -2

Query: 271  EEASKVC*LRRSLYGLKQSPRAWFGRFSDVLQKFGMTRSSQDYSLFFRHH-QGRRXXXXX 95
            E +S VC LRRSLYGLKQSPRAWFG+FS V+Q+FGMTRS  D+S+F+RH    R      
Sbjct: 1009 ESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPSRCIYLVV 1068

Query: 94   XXXXXXXXXXXXXXXSELKQFLQTQFQVTDL 2
                           ++LKQ L   FQ  DL
Sbjct: 1069 YVDDIVITGNDQDGITDLKQHLFKHFQTKDL 1099


>emb|CAN77046.1| hypothetical protein VITISV_035257 [Vitis vinifera]
          Length = 1478

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268  EASKVC*LRRSLYGLKQSPRAWFGRFSDVLQKFGMTRSSQDYSLFFRHHQ-GRRXXXXXX 92
            E+  VC LRRSLYGLKQSPRAWFGRFS V+Q+FGM RS+ D+S+F+ H+  G+       
Sbjct: 1102 ESGLVCRLRRSLYGLKQSPRAWFGRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVY 1161

Query: 91   XXXXXXXXXXXXXXSELKQFLQTQFQVTDL 2
                           +LKQ L T FQ  DL
Sbjct: 1162 VDDIVITGSDQDGIQKLKQHLFTHFQTKDL 1191


>emb|CAN64167.1| hypothetical protein VITISV_015919 [Vitis vinifera]
          Length = 383

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/90 (48%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 EASKVC*LRRSLYGLKQSPRAWFGRFSDVLQKFGMTRSSQDYSLFFRHHQ-GRRXXXXXX 92
           E+  VC LRRSLYGLKQSPRAWFGRFS V+Q+FGM RS+ D+S+F+ H+  G+       
Sbjct: 240 ESGLVCRLRRSLYGLKQSPRAWFGRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVY 299

Query: 91  XXXXXXXXXXXXXXSELKQFLQTQFQVTDL 2
                          +LKQ L T FQ  DL
Sbjct: 300 VDDIVITGSDQDGIQKLKQHLFTHFQTKDL 329


>emb|CAH23488.1| reverse transcriptase [Solanum tuberosum]
          Length = 80

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = -2

Query: 271 EEASKVC*LRRSLYGLKQSPRAWFGRFSDVLQKFGMTRSSQDYSLFFRHHQGRR 110
           E +S VC LRRSLYGLKQSPRAWFG+FS V+Q+FGMTRS  D+S+F+RH    R
Sbjct: 21  ESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPNR 74


>emb|CAH23505.1| reverse transcriptase [Solanum tuberosum]
           gi|57336097|emb|CAH25635.1| reverse transcriptase
           [Solanum bulbocastanum]
          Length = 78

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/54 (68%), Positives = 44/54 (81%)
 Frame = -2

Query: 271 EEASKVC*LRRSLYGLKQSPRAWFGRFSDVLQKFGMTRSSQDYSLFFRHHQGRR 110
           E +S VC LRRSLYGLKQSPRAWFG+FS V+Q+FGMTRS  D+S+F+RH    R
Sbjct: 19  ESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHSAPNR 72


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