BLASTX nr result

ID: Atractylodes22_contig00010987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010987
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   353   1e-95
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   352   4e-95
emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]   352   4e-95
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   350   1e-94
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   350   1e-94

>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  353 bits (907), Expect = 1e-95
 Identities = 180/221 (81%), Positives = 184/221 (83%)
 Frame = -3

Query: 664  RKCIVATNIAETSLTVDGIFYVIDTGYAKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXX 485
            RKCIVATNIAETSLTVDGIFYVIDTGY KMKVYNPRMGMDALQVFPVS            
Sbjct: 843  RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG 902

Query: 484  XXXXXTCYRLYTESAYQNEMLPQPVPEIQRANLGNVVXXXXXXXXXXXLDFRFMDPPPQD 305
                 TCYRLYTESAY NEMLP PVPEIQR NLGNVV           LDF FMDPPPQD
Sbjct: 903  RTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQD 962

Query: 304  NILNSMYQLWVLGALNNVGNLTDLGWKMVEFPLDPPLAKMLLMGEQLECLNEVLTIVSML 125
            NILNSMYQLWVLGALNNVG LTDLGWKMVEFPLDPPLAKMLLMGE+L CLNEVLTIVSML
Sbjct: 963  NILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEELGCLNEVLTIVSML 1022

Query: 124  SVPSVFFRPKDRAEKSEAAREKFLVPESDHLTLLNVYQQWE 2
            SVPSVFFRPKDRAE+S+AAREKF VPESDHLTLLNVY QW+
Sbjct: 1023 SVPSVFFRPKDRAEQSDAAREKFFVPESDHLTLLNVYLQWK 1063


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  352 bits (903), Expect = 4e-95
 Identities = 178/221 (80%), Positives = 185/221 (83%)
 Frame = -3

Query: 664  RKCIVATNIAETSLTVDGIFYVIDTGYAKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXX 485
            RKCIVATNIAETSLTVDGIFYVIDTGY KMKVYNPRMGMDALQVFPVS            
Sbjct: 863  RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG 922

Query: 484  XXXXXTCYRLYTESAYQNEMLPQPVPEIQRANLGNVVXXXXXXXXXXXLDFRFMDPPPQD 305
                 TCYRLYTESAY NE+L  PVPEIQR NLGNVV           LDF FMDPPPQD
Sbjct: 923  RTGPGTCYRLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQD 982

Query: 304  NILNSMYQLWVLGALNNVGNLTDLGWKMVEFPLDPPLAKMLLMGEQLECLNEVLTIVSML 125
            NILNSMYQLWVLGALNNVG LT+LGWKMVEFPLDPPLAKMLL+GEQLEC+NEVLTIVSML
Sbjct: 983  NILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSML 1042

Query: 124  SVPSVFFRPKDRAEKSEAAREKFLVPESDHLTLLNVYQQWE 2
            SVPSVFFRPKDRAE+S+AAREKF VPESDHLTLLNVYQQW+
Sbjct: 1043 SVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWK 1083


>emb|CAN71460.1| hypothetical protein VITISV_033508 [Vitis vinifera]
          Length = 855

 Score =  352 bits (903), Expect = 4e-95
 Identities = 178/221 (80%), Positives = 185/221 (83%)
 Frame = -3

Query: 664  RKCIVATNIAETSLTVDGIFYVIDTGYAKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXX 485
            RKCIVATNIAETSLTVDGIFYVIDTGY KMKVYNPRMGMDALQVFPVS            
Sbjct: 429  RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG 488

Query: 484  XXXXXTCYRLYTESAYQNEMLPQPVPEIQRANLGNVVXXXXXXXXXXXLDFRFMDPPPQD 305
                 TCYRLYTESAY NE+L  PVPEIQR NLGNVV           LDF FMDPPPQD
Sbjct: 489  RTGPGTCYRLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPPQD 548

Query: 304  NILNSMYQLWVLGALNNVGNLTDLGWKMVEFPLDPPLAKMLLMGEQLECLNEVLTIVSML 125
            NILNSMYQLWVLGALNNVG LT+LGWKMVEFPLDPPLAKMLL+GEQLEC+NEVLTIVSML
Sbjct: 549  NILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVSML 608

Query: 124  SVPSVFFRPKDRAEKSEAAREKFLVPESDHLTLLNVYQQWE 2
            SVPSVFFRPKDRAE+S+AAREKF VPESDHLTLLNVYQQW+
Sbjct: 609  SVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLNVYQQWK 649


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score =  350 bits (899), Expect = 1e-94
 Identities = 177/221 (80%), Positives = 183/221 (82%)
 Frame = -3

Query: 664  RKCIVATNIAETSLTVDGIFYVIDTGYAKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXX 485
            RKCIVATNIAETSLTVDGIFYVIDTGY KMKVYNPRMGMDALQVFPVS            
Sbjct: 752  RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG 811

Query: 484  XXXXXTCYRLYTESAYQNEMLPQPVPEIQRANLGNVVXXXXXXXXXXXLDFRFMDPPPQD 305
                 TCYRLYTESAY NEMLP PVPEIQR NLGNVV           LDF FMDPPPQD
Sbjct: 812  RTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQD 871

Query: 304  NILNSMYQLWVLGALNNVGNLTDLGWKMVEFPLDPPLAKMLLMGEQLECLNEVLTIVSML 125
            NILNSMYQLWVLGALNNVG LTDLGWKMVEFPLDPPLAKMLLMGEQL CL+EVLTIVSML
Sbjct: 872  NILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSML 931

Query: 124  SVPSVFFRPKDRAEKSEAAREKFLVPESDHLTLLNVYQQWE 2
            SVPSVFFRPKDR E+S+AARE+F +PESDHLTL NVYQQW+
Sbjct: 932  SVPSVFFRPKDRVEESDAARERFFIPESDHLTLYNVYQQWK 972


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  350 bits (899), Expect = 1e-94
 Identities = 177/221 (80%), Positives = 183/221 (82%)
 Frame = -3

Query: 664  RKCIVATNIAETSLTVDGIFYVIDTGYAKMKVYNPRMGMDALQVFPVSXXXXXXXXXXXX 485
            RKCIVATNIAETSLTVDGIFYVIDTGY KMKVYNPRMGMDALQVFPVS            
Sbjct: 872  RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGRAG 931

Query: 484  XXXXXTCYRLYTESAYQNEMLPQPVPEIQRANLGNVVXXXXXXXXXXXLDFRFMDPPPQD 305
                 TCYRLYTESAY NEMLP PVPEIQR NLGNVV           LDF FMDPPPQD
Sbjct: 932  RTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPPQD 991

Query: 304  NILNSMYQLWVLGALNNVGNLTDLGWKMVEFPLDPPLAKMLLMGEQLECLNEVLTIVSML 125
            NILNSMYQLWVLGALNNVG LTDLGWKMVEFPLDPPLAKMLLMGEQL CL+EVLTIVSML
Sbjct: 992  NILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSML 1051

Query: 124  SVPSVFFRPKDRAEKSEAAREKFLVPESDHLTLLNVYQQWE 2
            SVPSVFFRPKDR E+S+AARE+F +PESDHLTL NVYQQW+
Sbjct: 1052 SVPSVFFRPKDRVEESDAARERFFIPESDHLTLYNVYQQWK 1092