BLASTX nr result

ID: Atractylodes22_contig00010394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010394
         (1815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent...   437   e-120
ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent...   424   e-116
ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putativ...   407   e-111
ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicag...   386   e-104

>ref|XP_004138675.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Cucumis sativus] gi|449517699|ref|XP_004165882.1|
            PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase
            prp5-like [Cucumis sativus]
          Length = 562

 Score =  437 bits (1125), Expect = e-120
 Identities = 247/563 (43%), Positives = 344/563 (61%), Gaps = 28/563 (4%)
 Frame = -2

Query: 1721 MAKGEDAIIXXXXXXXXXXXXXXXXK---VSNRIAAIIAQKKRRQSGKRRMCQGMCFSLP 1551
            MAKG+DA+                     VS R+A+IIA KKRR SGKRR CQGMCFSLP
Sbjct: 1    MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 1550 TLEDPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDN-LSEKGSDASQNKRKANVDHQSNGK 1374
            T +DP+ND+    D+           ++PSK       ++ S ++ N    +V  ++   
Sbjct: 61   TPDDPYNDRNGKKDTK----------VKPSKSSKREFPKEKSTSAPNGTLRDVCFENARS 110

Query: 1373 DQE-----------QKRARVEKDSTPSDKEGSKKLSGHISEG-----CPSNFLISCLKTI 1242
             +E            KR++ + + T         + G   E       PS FLI CL  I
Sbjct: 111  SKEGSGGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFLILCLSAI 170

Query: 1241 QDMMHHYEAFEPGKPLFFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTIT 1062
            ++ ++H       KPLF D+WG EFW+CYS+G+++L+TSG  ST E+IAW+VS+A D+I 
Sbjct: 171  ENALYHDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIA 230

Query: 1061 KKEKEGVSFTSPFLLFLVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTC 882
            +KEKEG SF+SPFLLFLVP+QEKAT++R++CKPLKA G+HTVS+HPGAS+ HQI GLK+C
Sbjct: 231  RKEKEGSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQGLKSC 290

Query: 881  EPEFLVCTPDRLLELVSMEAIDISGVCSLIVDGLESFSGDAYLDSIKSIRQCISVDPHTV 702
            EPEFLV TP+RLLELV+M+AIDISGV  L+VDGLES S   YLD  +SIR+ IS   HT+
Sbjct: 291  EPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHTI 350

Query: 701  VFCSDLSKACLPAVSSLLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVLH 522
            VF    S A +P + SLL  P+ RLS       +SA IIQSI+   S +EKL K +Q L 
Sbjct: 351  VFSDSFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQALD 410

Query: 521  EVFSDPLVPGPSKLTFVVGKDDSREELVSAIRSKGYSI---SVTGGPEVVNREK-----E 366
                  + P P K+ F++GK+ +  +L +A++ KG+ I   ++ G PE+ N  K      
Sbjct: 411  RANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKLR 470

Query: 365  GTVSVMDLEDTEDADLSQVEVVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDAT 186
              V+  D+E     DL   E + I +    ID+Y +ILTGMAR+T  G LH  +++E+A+
Sbjct: 471  PVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEAS 530

Query: 185  IAASLAQVLQQCGQQAPESLKQL 117
            +A SL ++L+QCGQ  P++++ L
Sbjct: 531  VAGSLVEILEQCGQDVPKTVRNL 553


>ref|XP_003519029.1| PREDICTED: pre-mRNA-processing ATP-dependent RNA helicase prp5-like
            [Glycine max]
          Length = 563

 Score =  424 bits (1090), Expect = e-116
 Identities = 236/558 (42%), Positives = 340/558 (60%), Gaps = 23/558 (4%)
 Frame = -2

Query: 1721 MAKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIAQKKRRQSGKRRMCQGMCFSLPTLE 1542
            MAKGEDA+I                 VS ++AA+IA KKRR++GKRRMCQGMCFSLPTL+
Sbjct: 1    MAKGEDALIRKKNKKLRKKNSSGSSSVSAKVAAVIAAKKRRKAGKRRMCQGMCFSLPTLD 60

Query: 1541 DPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDASQNKRKAN-VDHQSNGKDQE 1365
            DPFND+    ++            +P   +D+L+ K +D  +       +  + N   +E
Sbjct: 61   DPFNDRGGKEETKTKGPKKKSHS-KPKDKMDHLNGKSADGKKGAVGGRKIARELNDLQRE 119

Query: 1364 QKRARVEKDSTP-----SDKE-----------GSKKLSGHISEGCPSNFLISCLKTIQDM 1233
             +      + T      S+++           G+K+    ISE  PS F+  CL +I++ 
Sbjct: 120  NESVTASNNLTHKCIINSERKNIDMTEMAHLCGTKQRDCDISE-FPSKFIFWCLSSIENA 178

Query: 1232 MHHYEAFEPGK--PLFFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITK 1059
            + H +A+  G+    F + WG EF +CYS G++++ETSG  +T EQIAW+VS A DT  +
Sbjct: 179  LRHGDAYTDGEGNSFFLNPWGLEFLKCYSTGKDLIETSGTSATAEQIAWMVSGAADTFVR 238

Query: 1058 KEKEGVSFTSPFLLFLVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCE 879
            KEKEG+SF  PFLLFLVPSQEK+T+VR VCKPLK+ GIHTVS+HPGAS+DHQI GLKTCE
Sbjct: 239  KEKEGLSFPGPFLLFLVPSQEKSTQVRTVCKPLKSVGIHTVSIHPGASLDHQIQGLKTCE 298

Query: 878  PEFLVCTPDRLLELVSMEAIDISGVCSLIVDGLESFSGDAYLDSIKSIRQCISVDPHTVV 699
            PEFLV TP+RLLELVS +AIDISGV  L++DGL +     + D++KSI+ CIS +P  V+
Sbjct: 299  PEFLVSTPERLLELVSTKAIDISGVSMLVIDGLNTICSAGHADTVKSIKNCISGNPRVVI 358

Query: 698  FCSDLSKACLPAVSSLLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVLHE 519
            F   +S   +P V  LL   +CR+S  +   + S+ IIQS++V  S E+K+   ++ L +
Sbjct: 359  FNDCVSHMSIPMVRYLLTGSICRVSLNNSINSLSSYIIQSVEVCTSEEDKVVMSIEALDQ 418

Query: 518  VFSDPLVPGPSKLTFVVGKDDSREELVSAIRSKGYSISVTGGPEVVN----REKEGTVSV 351
              S+      S + +++ KD    +LV  ++SKGYS+S+      +N     ++   VS+
Sbjct: 419  FQSNS--TQNSNMLYILSKDVKCHKLVKTLKSKGYSVSLDSDAANINDRVDSDRRAAVSL 476

Query: 350  MDLEDTEDADLSQVEVVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASL 171
            +DL      D+   +VV++ +F  +ID Y  ILT MAR ++ G LH  LT+ D  +AA L
Sbjct: 477  IDLVQISTTDIGTYDVVVLPSFVPSIDTYVHILTKMARTSVNGVLHSFLTKRDTELAAPL 536

Query: 170  AQVLQQCGQQAPESLKQL 117
              VL+QCGQ+ P++L+ L
Sbjct: 537  IAVLEQCGQEVPQTLQDL 554


>ref|XP_002530895.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223529548|gb|EEF31501.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 493

 Score =  407 bits (1046), Expect = e-111
 Identities = 243/541 (44%), Positives = 318/541 (58%), Gaps = 6/541 (1%)
 Frame = -2

Query: 1721 MAKGEDAIIXXXXXXXXXXXXXXXXK-VSNRIAAIIAQKKRRQSGKRRMCQGMCFSLPTL 1545
            MAKG+D +                   VS R+A+IIA KKRR SGKRRMCQGMCFSLPTL
Sbjct: 1    MAKGDDTVTKKRNKAKRKKLNRENSSNVSARVASIIAAKKRRLSGKRRMCQGMCFSLPTL 60

Query: 1544 EDPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDASQNKRKANVDH--QSNGKD 1371
            +DPFN++    D                    N+ +K       K+K N     Q NG D
Sbjct: 61   DDPFNERHGRMDI-------------------NVKDK-------KKKVNTREKVQLNGND 94

Query: 1370 QEQKRARVEKDSTPSDKEGSKKLSGHISEGCPSNFLISCLKTIQDMMHHYEAF-EPGKPL 1194
               +    +                  S+G PS F I CL  I+  + H   + +  KPL
Sbjct: 95   LNHQEQACD-----------------YSDG-PSKFFILCLNAIEKALRHDGTYNDEEKPL 136

Query: 1193 FFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFLLF 1014
              + WG EF +  S G+++LETSG   T+EQIAWIVS A D I +KEKEG+SF+SPFLLF
Sbjct: 137  LVNPWGLEFLKFCSIGKDILETSGSSCTIEQIAWIVSIAADAIARKEKEGLSFSSPFLLF 196

Query: 1013 LVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLELV 834
            LVPSQEKA +VR VCKPLK  G+HTVSLH GAS+DHQI GLK+CEPEFLV TP+RL+EL+
Sbjct: 197  LVPSQEKAAKVRMVCKPLKDLGVHTVSLHAGASLDHQIRGLKSCEPEFLVSTPERLMELI 256

Query: 833  SMEAIDISGVCSLIVDGLESFSGDAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPAVSS 654
            S++AIDI+GV  L+VDGL+S   D  L S+KSIRQ IS +PHTV F +  + AC+PA+ +
Sbjct: 257  SLKAIDITGVSFLVVDGLDSLYQDGSLGSLKSIRQSISGNPHTVAFNNLFNHACVPALQN 316

Query: 653  LLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVLHEVFSDPLVPGPSKLTF 474
            L    + RLS  D   ++SA I Q+I+V  S ++KL K            L     KL F
Sbjct: 317  LFVGSINRLSLSDSICSQSACIFQTIEVCTSEQKKLSK------------LCSHRLKLLF 364

Query: 473  VVGKDDSREELVSAIRSKGYSISVTGGPEV--VNREKEGTVSVMDLEDTEDADLSQVEVV 300
            +V  +     LV  ++S GYS+S     EV  V+   +  VSV++ E    ADL   E++
Sbjct: 365  IVENNKKAASLVKILKSNGYSVSTESNCEVSNVDTRMKPVVSVINAEHISTADLGVYEII 424

Query: 299  IIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPESLKQ 120
            I+ NF ++ID Y +ILT MAR+T  G LH  +T EDA +A  L ++L+QCGQ  PE+L+ 
Sbjct: 425  ILPNFVLSIDNYIQILTRMARHTTHGILHSFMTEEDALLAGPLIEILEQCGQAVPETLRT 484

Query: 119  L 117
            L
Sbjct: 485  L 485


>ref|XP_002315356.1| predicted protein [Populus trichocarpa] gi|222864396|gb|EEF01527.1|
            predicted protein [Populus trichocarpa]
          Length = 491

 Score =  405 bits (1042), Expect = e-110
 Identities = 241/541 (44%), Positives = 316/541 (58%), Gaps = 6/541 (1%)
 Frame = -2

Query: 1721 MAKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIAQKKRRQSGKRRMCQGMCFSLPTLE 1542
            MAKG+DA+                  VS R+A+IIA KKRR SGKRRMCQGMCFSLPTL+
Sbjct: 1    MAKGDDAVAKKKNKERRKKMQKEGSSVSARVASIIAAKKRRLSGKRRMCQGMCFSLPTLD 60

Query: 1541 DPFNDKPMIHDSXXXXXXXXXXKIRPSKGVDNLSEKGSDASQNKRKANVDHQSNGKDQEQ 1362
            DPFND+                                               NGK + Q
Sbjct: 61   DPFNDR-----------------------------------------------NGKLEFQ 73

Query: 1361 KRARVEKDSTPSDKEGSKKLSGHISEGCPSNFLISCLKTIQDMMHHYEAF--EPGKPLFF 1188
            K+   E  + PS ++  K  +    + CPS FL+  L  I+  + H   +  +  + LF 
Sbjct: 74   KK---ETKNKPSARKNEKAFARENMD-CPSKFLMYSLNEIEKALRHEGTYNDDEDESLFV 129

Query: 1187 DSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFLLFLV 1008
              WG EF +CYS G+++LETSG   T EQIAW+VS A D I +KE+E +S  SP  LFLV
Sbjct: 130  SPWGVEFLKCYSTGKDILETSGSSCTTEQIAWVVSMAADIIVRKEEEDLSVPSPSFLFLV 189

Query: 1007 PSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLELVSM 828
            PSQE+A +VR VCKPLKA GIHTVS+HPG+SIDHQIHGL +CEPEFLV TPDRLLELVS+
Sbjct: 190  PSQEEAVKVRMVCKPLKALGIHTVSVHPGSSIDHQIHGLASCEPEFLVSTPDRLLELVSL 249

Query: 827  EAIDISGVCSLIVDGLESFSGDAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPAVSSLL 648
            +AIDISGV  L+VDG+ES      L+++KSIRQ IS    TVVF +  S AC+P + +LL
Sbjct: 250  KAIDISGVSFLVVDGVESLYNGGCLNALKSIRQSISGSLRTVVFNNFFSGACVPVLQNLL 309

Query: 647  PSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQK--GLQVLHEVFSDPLVPGPSKLTF 474
               +CRLS +     +SA I+Q+I++  S EE+L K    Q L   F          + +
Sbjct: 310  LGSICRLSIDQSIPIQSACIVQTINLCTSEEERLLKVCTSQYLDNCF--------LLVLY 361

Query: 473  VVGKDDSREELVSAIRSKGYSISVTGGPEVVNREK--EGTVSVMDLEDTEDADLSQVEVV 300
            VVG D+S   LV  +   GY++SV     + N +   +  VSV+++E     +L+  E V
Sbjct: 362  VVGNDNSSFNLVKMLEINGYTVSVESNRSISNDDNRMKPVVSVINVERISTTNLAFYETV 421

Query: 299  IIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPESLKQ 120
            I+ NF  +ID Y +ILT MAR++IKG  H  LT+EDA IA  L  +L+QCGQ  PE+L+ 
Sbjct: 422  ILPNFGPSIDNYVQILTRMARHSIKGNFHSFLTKEDALIARPLMGILEQCGQAVPEALRN 481

Query: 119  L 117
            L
Sbjct: 482  L 482


>ref|XP_003590262.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355479310|gb|AES60513.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 532

 Score =  386 bits (991), Expect = e-104
 Identities = 218/544 (40%), Positives = 320/544 (58%), Gaps = 9/544 (1%)
 Frame = -2

Query: 1721 MAKGEDAIIXXXXXXXXXXXXXXXXKVSNRIAAIIAQKKRRQSGKRRMCQGMCFSLPTLE 1542
            MAKG+D+++                 VS +IAA+IA KKRR++GKRR+C+GMCFSLP+L+
Sbjct: 1    MAKGDDSVLKKHNKKLRKKQNSKNS-VSAKIAAVIASKKRRKAGKRRICEGMCFSLPSLD 59

Query: 1541 DPFND---KPMI-HDSXXXXXXXXXXKIRPSKGVDNLSEKGSDASQNKRKANVDHQSNGK 1374
            DPFND   KP                K  P KG     EKG+   +N         +N  
Sbjct: 60   DPFNDRQGKPEFKKKDPKKKTSSQKEKTTPVKGKSVPGEKGTAVGRN-------GANNKS 112

Query: 1373 DQEQKRARVEKDSTPSDKEGSKKLSGHISEGCPSNFLISCLKTIQDMMHHYEAFEPGK-- 1200
            +  +     + D+  SD               PS F+  CL  I++ + H +A+  G+  
Sbjct: 113  EMVEVCCGEQHDNEVSD--------------FPSKFVFWCLSAIENALRHDDAYTDGEGN 158

Query: 1199 PLFFDSWGFEFWRCYSNGRNVLETSGGCSTMEQIAWIVSTAVDTITKKEKEGVSFTSPFL 1020
              F + WG EF + +S G+++++T G  +T EQIAW+VS A D   +KEK+G+S  +PFL
Sbjct: 159  SFFLNPWGLEFSKHFSTGKDLIDTGGTFATTEQIAWMVSAAADIFVRKEKQGLSLDTPFL 218

Query: 1019 LFLVPSQEKATEVRAVCKPLKAFGIHTVSLHPGASIDHQIHGLKTCEPEFLVCTPDRLLE 840
            LFLVPS++KA +VR VCKPLK+ GIHTVS+HPGAS+DHQI GLK+CEPEFL+ TP+RLLE
Sbjct: 219  LFLVPSEKKAGQVRTVCKPLKSVGIHTVSVHPGASLDHQIQGLKSCEPEFLISTPERLLE 278

Query: 839  LVSMEAIDISGVCSLIVDGLESFSGDAYLDSIKSIRQCISVDPHTVVFCSDLSKACLPAV 660
            LVS++AIDISG+  L++DG ++     + D+IKSI++ IS +P  VVF    +   +P V
Sbjct: 279  LVSLKAIDISGISMLVIDGFDAICKAGHADAIKSIKKFISGNPSLVVFNDSFNHTSIPVV 338

Query: 659  SSLLPSPVCRLSREDFFVNKSAGIIQSIDVVGSAEEKLQKGLQVLHEVFSDPLVPGPSKL 480
              LL  P+CR+S  +   + S+ I+QS+ V  S E+KL K ++VL +  S       S L
Sbjct: 339  RHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKLVKSIEVLRQFRSSQ--THSSNL 396

Query: 479  TFVVGKDDSREELVSAIRSKGYSISVTGGPEVVNREKEGT---VSVMDLEDTEDADLSQV 309
             +++ KD    +LV  ++S G S S+      +N   +     V+++DLED    D+   
Sbjct: 397  LYILRKDVKCHKLVKTLKSMGCSTSLDSDAATINDSVDSNRRLVTMIDLEDISTLDIGMY 456

Query: 308  EVVIIYNFDIAIDEYKKILTGMARYTIKGRLHVILTREDATIAASLAQVLQQCGQQAPES 129
            +V+++ +   ++D Y+ ILT MAR ++ G LH  LT+ D   A  L  +L+QCGQ+ PE+
Sbjct: 457  DVIVLPSLVPSMDTYEHILTNMARQSVNGILHGFLTKSDTEHAGPLISILEQCGQEVPET 516

Query: 128  LKQL 117
            LK L
Sbjct: 517  LKDL 520


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