BLASTX nr result

ID: Atractylodes22_contig00010309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010309
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Viti...   102   2e-20
ref|XP_002510541.1| Protein BRE, putative [Ricinus communis] gi|...    97   1e-18
ref|XP_002865515.1| hypothetical protein ARALYDRAFT_917509 [Arab...    97   1e-18
ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>ref|XP_002275256.1| PREDICTED: BRCA1-A complex subunit BRE [Vitis vinifera]
           gi|302142670|emb|CBI19873.3| unnamed protein product
           [Vitis vinifera]
          Length = 375

 Score =  102 bits (255), Expect = 2e-20
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +2

Query: 11  MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKNPALLDRFTLAIPFCLDYIKWDVIY 190
           M  D+ PP++  Q+NYLL+HSP SIK++QMW+G K   LLDRF+L IPFCLD+IKWDVIY
Sbjct: 1   MTTDAFPPVIAAQINYLLSHSPLSIKIDQMWAGCKYSGLLDRFSLLIPFCLDFIKWDVIY 60

Query: 191 NAQFPL 208
           NAQ PL
Sbjct: 61  NAQCPL 66


>ref|XP_002510541.1| Protein BRE, putative [Ricinus communis]
           gi|223551242|gb|EEF52728.1| Protein BRE, putative
           [Ricinus communis]
          Length = 362

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 187
           M+ D  PP +  QL YLL H  H+IKVEQ+WSGSK  P  LDRFTL IP+CLDY+KWD+I
Sbjct: 1   MSFDGFPPFISAQLQYLLNHYTHAIKVEQVWSGSKYYPGSLDRFTLLIPYCLDYLKWDII 60

Query: 188 YNAQFPL 208
           YN +FPL
Sbjct: 61  YNVEFPL 67


>ref|XP_002865515.1| hypothetical protein ARALYDRAFT_917509 [Arabidopsis lyrata subsp.
           lyrata] gi|297311350|gb|EFH41774.1| hypothetical protein
           ARALYDRAFT_917509 [Arabidopsis lyrata subsp. lyrata]
          Length = 380

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 41/67 (61%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSK-NPALLDRFTLAIPFCLDYIKWDVI 187
           MA + +PP++  QL+YLL HSP SIK+E +WSG+K NP +LDRFTL IP+CL+ IKWDVI
Sbjct: 1   MAFEGLPPLIADQLHYLLNHSPDSIKIENVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60

Query: 188 YNAQFPL 208
           YN+++P+
Sbjct: 61  YNSEYPV 67


>ref|XP_002300702.1| predicted protein [Populus trichocarpa] gi|222842428|gb|EEE79975.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 187
           M  D   P++ +QL YLL H PH+I++EQ WSG++  P  LDRFTL IP+CLDYIKWD+I
Sbjct: 1   MPFDGFSPLISSQLQYLLNHFPHTIQIEQAWSGTRYFPGSLDRFTLLIPYCLDYIKWDII 60

Query: 188 YNAQFPL 208
           YNA+FPL
Sbjct: 61  YNAEFPL 67


>ref|XP_002307728.1| predicted protein [Populus trichocarpa] gi|222857177|gb|EEE94724.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = +2

Query: 11  MAVDSIPPIVYTQLNYLLTHSPHSIKVEQMWSGSKN-PALLDRFTLAIPFCLDYIKWDVI 187
           M+ D  PP +  QL YLL H PH+I++EQ  SG++  P  LDRFTL IP+CLDY+KWDVI
Sbjct: 1   MSYDGFPPFISAQLQYLLNHYPHTIQIEQARSGTRYFPGSLDRFTLLIPYCLDYMKWDVI 60

Query: 188 YNAQFPL 208
           YNA+FPL
Sbjct: 61  YNAEFPL 67


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