BLASTX nr result

ID: Atractylodes22_contig00010219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00010219
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   127   2e-56
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      124   1e-55
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-55
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl...   116   6e-50
ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloropl...   117   7e-49

>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  127 bits (318), Expect(2) = 2e-56
 Identities = 63/94 (67%), Positives = 72/94 (76%)
 Frame = -1

Query: 646 NLSQTSLRFTIPNPRQPTRLLSVAEEAPATVVTQDPSSEAARRLYVGNIPRTTNNDELQK 467
           N S+ S    + NPR P RL +VAEEA       DPSSEAA+RLY+GNIPRT +NDEL K
Sbjct: 39  NFSKFSHLDVVLNPRVPRRLFAVAEEAAPVAPPPDPSSEAAKRLYIGNIPRTVDNDELTK 98

Query: 466 VFEEHGAVEKVEVMYDKYSGRSRRFGFVTMKTVD 365
           + EEHGAVEK EVMYDKYSGRSRRF FVTM+TV+
Sbjct: 99  IVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVE 132



 Score =  118 bits (295), Expect(2) = 2e-56
 Identities = 58/82 (70%), Positives = 70/82 (85%)
 Frame = -3

Query: 302 ANAAIEKLDGTEIGGRKIKVNVTEKPLNGVSTSLLQAEETPFVDSPYKLYVGNLAKTVTS 123
           ANA IEKL+GT+IGGR+IKVN+TEKPL     S LQ EE+ FVDSP+K+YVGNLAKTVTS
Sbjct: 134 ANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQFVDSPHKVYVGNLAKTVTS 193

Query: 122 DSLKSFFAEKGNVVGARVSRVP 57
           + LK+FF+EKG V+ A+VSRVP
Sbjct: 194 EILKNFFSEKGKVLSAKVSRVP 215


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  124 bits (310), Expect(2) = 1e-55
 Identities = 59/82 (71%), Positives = 73/82 (89%)
 Frame = -3

Query: 302 ANAAIEKLDGTEIGGRKIKVNVTEKPLNGVSTSLLQAEETPFVDSPYKLYVGNLAKTVTS 123
           ANAAIEKL+GTEIGGR+IKVN+TEKPL  +    LQ++ET FVDSPYK+YVGNLAKTV +
Sbjct: 133 ANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQFVDSPYKVYVGNLAKTVAT 192

Query: 122 DSLKSFFAEKGNVVGARVSRVP 57
           D+LK+FF++KGNV+ A+VSRVP
Sbjct: 193 DTLKNFFSKKGNVLSAKVSRVP 214



 Score =  119 bits (297), Expect(2) = 1e-55
 Identities = 63/85 (74%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -1

Query: 616 IPNPRQPTRLLSVAEE-APATVVTQDPSSEAARRLYVGNIPRTTNNDELQKVFEEHGAVE 440
           I N + P RL +VAEE APA  V  DPSSEAARRLYVGNIPRT  N+EL K+ EEHGAVE
Sbjct: 49  ILNTKAPQRLFAVAEETAPAAAV--DPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVE 106

Query: 439 KVEVMYDKYSGRSRRFGFVTMKTVD 365
           K EVMYDKYSGRSRRF FVTMKT +
Sbjct: 107 KAEVMYDKYSGRSRRFAFVTMKTAE 131


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  122 bits (306), Expect(2) = 3e-55
 Identities = 58/82 (70%), Positives = 73/82 (89%)
 Frame = -3

Query: 302 ANAAIEKLDGTEIGGRKIKVNVTEKPLNGVSTSLLQAEETPFVDSPYKLYVGNLAKTVTS 123
           ANAAIEKL+GTEIGGR+IKVN+TEKPL  +    LQ++E+ FVDSPYK+YVGNLAKTV +
Sbjct: 133 ANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQFVDSPYKVYVGNLAKTVAT 192

Query: 122 DSLKSFFAEKGNVVGARVSRVP 57
           D+LK+FF++KGNV+ A+VSRVP
Sbjct: 193 DTLKNFFSKKGNVLSAKVSRVP 214



 Score =  119 bits (297), Expect(2) = 3e-55
 Identities = 63/85 (74%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -1

Query: 616 IPNPRQPTRLLSVAEE-APATVVTQDPSSEAARRLYVGNIPRTTNNDELQKVFEEHGAVE 440
           I N + P RL +VAEE APA  V  DPSSEAARRLYVGNIPRT  N+EL K+ EEHGAVE
Sbjct: 49  ILNTKAPQRLFAVAEETAPAAAV--DPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVE 106

Query: 439 KVEVMYDKYSGRSRRFGFVTMKTVD 365
           K EVMYDKYSGRSRRF FVTMKT +
Sbjct: 107 KAEVMYDKYSGRSRRFAFVTMKTAE 131


>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
           sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
           ribosomal protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 251

 Score =  116 bits (290), Expect(2) = 6e-50
 Identities = 56/83 (67%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
 Frame = -3

Query: 302 ANAAIEKLDGTEIGGRKIKVNVTEKPL-NGVSTSLLQAEETPFVDSPYKLYVGNLAKTVT 126
           ANAAIEKL+ TE+GGRKIKVN+TEKP+ N V  S LQAEE+ F+DSPYK+YVGN++ TV+
Sbjct: 128 ANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSPYKVYVGNISSTVS 187

Query: 125 SDSLKSFFAEKGNVVGARVSRVP 57
           +++LK+FF+EKG V+ A+VSRVP
Sbjct: 188 TETLKNFFSEKGKVLSAKVSRVP 210



 Score =  107 bits (267), Expect(2) = 6e-50
 Identities = 55/88 (62%), Positives = 65/88 (73%)
 Frame = -1

Query: 628 LRFTIPNPRQPTRLLSVAEEAPATVVTQDPSSEAARRLYVGNIPRTTNNDELQKVFEEHG 449
           LR +    + PTRL +VAE     V TQ  SS A R+LY+GNIPR  NN+EL ++ +EHG
Sbjct: 44  LRISPVAAKPPTRLFAVAE-----VATQGASSVAERKLYIGNIPRNVNNEELTRIVQEHG 98

Query: 448 AVEKVEVMYDKYSGRSRRFGFVTMKTVD 365
           AVEK EVMYDKYSGRSRRF FVTMKTV+
Sbjct: 99  AVEKAEVMYDKYSGRSRRFAFVTMKTVE 126


>ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
           gi|297736206|emb|CBI24844.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  117 bits (293), Expect(2) = 7e-49
 Identities = 59/83 (71%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
 Frame = -3

Query: 302 ANAAIEKLDGTEIGGRKIKVNVTEKPLNGVSTSLLQAEETPFVDSPYKLYVGNLAKTVTS 123
           ANAAIEKL+GTEIGGR+IKVN+TEKPL  +  SLLQAEE+ F+DSP+K+YVGNLA+TVT+
Sbjct: 124 ANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQFIDSPHKVYVGNLARTVTT 183

Query: 122 DSLKSFFAEK-GNVVGARVSRVP 57
           D+L  FF+EK G V+ A+VSRVP
Sbjct: 184 DTLTQFFSEKGGKVLSAKVSRVP 206



 Score =  102 bits (255), Expect(2) = 7e-49
 Identities = 55/97 (56%), Positives = 65/97 (67%)
 Frame = -1

Query: 655 LNPNLSQTSLRFTIPNPRQPTRLLSVAEEAPATVVTQDPSSEAARRLYVGNIPRTTNNDE 476
           L P     S+ F    P++P  + +V  EAP        S  AARRLYVGNIPRT ++ E
Sbjct: 31  LKPFHFLNSVTFKAIKPKRPIAVSAVTAEAPVAT-----SDVAARRLYVGNIPRTLDSAE 85

Query: 475 LQKVFEEHGAVEKVEVMYDKYSGRSRRFGFVTMKTVD 365
           L ++ EEHGAVEK EVMYDKYSGRSRRF FVTMKTV+
Sbjct: 86  LARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVE 122