BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005939
         (2578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     118   7e-24
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        108   5e-21
gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]     105   6e-20
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   103   3e-19
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     103   3e-19

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  118 bits (296), Expect = 7e-24
 Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
 Frame = +1

Query: 2119 ANNTNISFSNLILRSVLEKNKLNGTNFIDWYHNLMIVLRNERKLYVLEGAPPPALPSNAT 2298
            AN T  +F+   LRS+LEK KLNGTNF+DWY NL IVL+ ERK YVLE   P  LP+NAT
Sbjct: 3    ANTTPSTFN---LRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNAT 59

Query: 2299 RAVCNAYDKYTNNSLDVDCLI-----RNFKRTMKT*QPLI*YHC*KTCFSNR-QCKKGLT 2460
                  ++K+TN++LD+ CL+        ++  ++          +  F N+ + ++  T
Sbjct: 60   ATARRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNT 119

Query: 2461 VKALHVCMMA*GSSISTHILKMKGYINQLEGLGFPLGQE 2577
             K+L  C +  G+ +S H++KM GYI  LE LGFPL QE
Sbjct: 120  SKSLFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQE 158


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  108 bits (271), Expect = 5e-21
 Identities = 66/155 (42%), Positives = 90/155 (58%), Gaps = 10/155 (6%)
 Frame = +1

Query: 2143 SNLILRSVLEKNKLNGTNFIDWYHNLMIVLRNERKLYVLEGAPPPALPSNATRAVCNAYD 2322
            S+  LRS+LEK KLNGTNF+DWY NL IVLR E K +VLE   P  LP+NAT A    ++
Sbjct: 9    SSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRREHE 68

Query: 2323 KYTNNSLDVDCLI-----RNFKRTMKT*QPLI*YHC*KTCFSN-----RQCKKGLTVKAL 2472
            K  N  LD+ CL+       F+R  +T    +  H   T   N      + ++  T K+L
Sbjct: 69   KRCNEYLDISCLMLVTISPEFQRQYQT----LDAHTIITRLCNMFEYQARAERFNTSKSL 124

Query: 2473 HVCMMA*GSSISTHILKMKGYINQLEGLGFPLGQE 2577
              C +A G+++S +++KM GY   LE LGFPL +E
Sbjct: 125  FACRLAEGNAVSPNVIKMIGYTESLEKLGFPLSKE 159


>gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 478

 Score =  105 bits (262), Expect = 6e-20
 Identities = 61/151 (40%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
 Frame = +1

Query: 2143 SNLILRSVLEKNKLNGTNFIDWYHNLMIVLRNERKLYVLEGAPPPALPSNATRAVCNAYD 2322
            SN  L S+LEK KL GTNF+DWYHNL IVLR E K +VL    P  LP+NA  A C  ++
Sbjct: 7    SNFNLWSILEKEKLTGTNFLDWYHNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQCREHE 66

Query: 2323 KYTNNSLDVDCL-IRNFKRTMKT*QPLI*YHC*KTCFSN-----RQCKKGLTVKALHVCM 2484
            +  N  LD+ CL +      ++     +  H   T   N      + ++  T K L  C 
Sbjct: 67   RRCNEYLDISCLMLATMSPELQRQYEALNDHTIITGLRNMFEDQARAERFNTSKFLFACR 126

Query: 2485 MA*GSSISTHILKMKGYINQLEGLGFPLGQE 2577
            +A G+ +S H++KM GY   L+ LGFPL +E
Sbjct: 127  LAEGNPVSLHVIKMIGYTESLDKLGFPLSRE 157


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  103 bits (256), Expect = 3e-19
 Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
 Frame = +1

Query: 2143 SNLILRSVLEKNKLNGTNFIDWYHNLMIVLRNERKLYVLEGAPPPALPSNATRAVCNAYD 2322
            SN  LRS+LEK KL GTNF+DWY NL IVLR E K +VL    P  LP+NA  A    ++
Sbjct: 74   SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 133

Query: 2323 KYTNNSLDVDCL-IRNFKRTMKT*QPLI*YHC*KTCFSN-----RQCKKGLTVKALHVCM 2484
            K  N+ LD+ CL +      ++     +  H   T   N      + ++  T K+L  C 
Sbjct: 134  KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 193

Query: 2485 MA*GSSISTHILKMKGYINQLEGLGFPLGQE 2577
            +A G+ +S H++KM GY   L+ LGFPL +E
Sbjct: 194  LAEGNLVSPHVIKMIGYTESLDKLGFPLSRE 224


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  103 bits (256), Expect = 3e-19
 Identities = 61/151 (40%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
 Frame = +1

Query: 2143 SNLILRSVLEKNKLNGTNFIDWYHNLMIVLRNERKLYVLEGAPPPALPSNATRAVCNAYD 2322
            SN  LRS+LEK KL GTNF+DWY NL IVLR E K +VL    P  LP+NA  A    ++
Sbjct: 7    SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 66

Query: 2323 KYTNNSLDVDCL-IRNFKRTMKT*QPLI*YHC*KTCFSN-----RQCKKGLTVKALHVCM 2484
            K  N+ LD+ CL +      ++     +  H   T   N      + ++  T K+L  C 
Sbjct: 67   KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 126

Query: 2485 MA*GSSISTHILKMKGYINQLEGLGFPLGQE 2577
            +A G+ +S H++KM GY   L+ LGFPL +E
Sbjct: 127  LAEGNLVSPHVIKMIGYTESLDKLGFPLSRE 157