BLASTX nr result

ID: Atractylodes22_contig00005503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005503
         (1293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|2...   254   3e-65
ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus ...   235   2e-59
ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   230   7e-58
emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]   227   4e-57
gb|AFK36482.1| unknown [Lotus japonicus]                              226   1e-56

>ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|222836165|gb|EEE74586.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  254 bits (650), Expect = 3e-65
 Identities = 116/241 (48%), Positives = 156/241 (64%)
 Frame = -3

Query: 943 GSLQVVLNDPDVLDCPICLDPLCTPVFQCENGHIACASCCSKVKRKCPSCCMPIGYNRCR 764
           G +   L+DP+VLDCPIC +PL  PVFQC+NGH AC+SCC K++ KCPSC MPIGYNRCR
Sbjct: 112 GVIYATLSDPEVLDCPICCEPLTIPVFQCDNGHTACSSCCIKLQHKCPSCTMPIGYNRCR 171

Query: 763 AIEKVIESVRVSCKNSRYGCKEMMLYNKKSEHEQKCPHATCFCPHPTCPFAGSSKNLYLH 584
           AIEKV+ES++VSC NS YGCKE + Y+KK EH++ C HA C CP P C + GSSK LY H
Sbjct: 172 AIEKVLESLKVSCSNSSYGCKESICYSKKYEHDKSCTHAPCTCPLPACNYQGSSKRLYQH 231

Query: 583 FGVQHAASATRFTYNTTFSLRIETNQKHKILQEQHESVIFILNHEVQEHDRGFNVDCIGP 404
             ++H    T F +NT+F L    + K ++LQE+ E V+FIL +  +       V C+GP
Sbjct: 232 CRIKHLCDLTSFQFNTSFPLFFMVDHKFRVLQEEKEDVLFILTNRSECLGNVITVSCMGP 291

Query: 403 STLKTAFVYQLTAKNMEASLSLQGVPETYSKWSEHNLRKNYLKVPSEFPDYRGFLSLQVC 224
           S+ K  + Y+LTAK   +++  Q          +H     +L VP++F    G ++L VC
Sbjct: 292 SSSKQGYFYELTAKAEGSNVRFQSSTRNIQTRVDHPPSLGFLLVPNDFLGTHGGITLDVC 351

Query: 223 I 221
           I
Sbjct: 352 I 352


>ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527633|gb|EEF29745.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 374

 Score =  235 bits (599), Expect = 2e-59
 Identities = 112/249 (44%), Positives = 153/249 (61%), Gaps = 1/249 (0%)
 Frame = -3

Query: 964 PVFNNATGSLQVVLNDPDVLDCPICLDPLCTPVFQCENGHIACASCCSKVKRKCPSCCMP 785
           PV      ++ V L DP+VLDCPIC + L  PVFQCENGH AC+SCC K+  KCPSC +P
Sbjct: 101 PVGTARNAAICVTLTDPEVLDCPICYECLSIPVFQCENGHTACSSCCRKLAHKCPSCSLP 160

Query: 784 IGYNRCRAIEKVIESVRVSCKNSRYGCKEMMLYNKKSEHEQKCPHATCFCPHPTCPFAGS 605
           IGYNRCRAIEKV+ESV++ C N +YGCKEM+ Y+KK +H++ C +A C CP   C F GS
Sbjct: 161 IGYNRCRAIEKVLESVKLPCHNLKYGCKEMVSYSKKLDHDKICNNAPCSCPLSGCSFVGS 220

Query: 604 SKNLYLHFGVQHAASATRFTYNTTFSLRIETNQKHKILQEQHESVIFILNHEVQEHDRGF 425
           S+ LY HF ++H  SA  F YN TF +    N K  ILQE+ E V+F L +  +      
Sbjct: 221 SRQLYQHFSIKHKGSAAPFRYNITFPVFFTLNDKSLILQEEKEGVVFFLKNTAEILGNVI 280

Query: 424 NVDCIGPSTLKTAFVYQLTAKNMEASLSLQGVPETYSKWSEHNLRKN-YLKVPSEFPDYR 248
            V+C+G  + K  + Y+L A+   ++L  Q   +   K +  +   + +L +P  F    
Sbjct: 281 TVNCLGGPSSKGGYFYELAARMEGSNLKFQSFTKNIQKVNHDDPHSDTFLIIPGSFFGSY 340

Query: 247 GFLSLQVCI 221
           G +SL +CI
Sbjct: 341 GQISLDLCI 349


>ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Vitis
           vinifera]
          Length = 355

 Score =  230 bits (586), Expect = 7e-58
 Identities = 114/247 (46%), Positives = 152/247 (61%), Gaps = 2/247 (0%)
 Frame = -3

Query: 952 NATGSLQVVLNDPDVLDCPICLDPLCTPVFQCENGHIACASCCSKVKRKCPSCCMPIGYN 773
           N   S+ V+L DP+VLDC ICL+PL  PVFQCENGHIAC+SCC+K+  +CPSC  PIGYN
Sbjct: 97  NRDASVSVILTDPEVLDCSICLEPLSVPVFQCENGHIACSSCCTKLSNRCPSCSWPIGYN 156

Query: 772 RCRAIEKVIESVRVSCKNSRYGCKEMMLYNKKSEHEQKCPHATCFCPHPTCPFAGSSKNL 593
           RCRAIEKV+ESV+VSC+N+ YGCKE + Y KK +HE  C +  C CPH  C F GSSK L
Sbjct: 157 RCRAIEKVLESVKVSCQNTAYGCKETVSYGKKHDHEVTCNYVPCSCPHSNCNFRGSSKQL 216

Query: 592 YLHFGVQHAASATRFTYNTTFSLRIETNQKHKI-LQEQHESVIFILNHEVQEHDRGFNVD 416
             HF  +H  S  RF YN+ F + +E N   K  + E  E  +FI++  +Q+      V 
Sbjct: 217 AQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKFCILEAKEGALFIVSSSIQQLGHAVTVC 276

Query: 415 CIGPSTLKTAFVYQLTAKNMEASLSLQGVPETYSKWSE-HNLRKNYLKVPSEFPDYRGFL 239
            IGP + +    + L A   + S+ LQ   E   +  E  +L   +L +P+ F    G L
Sbjct: 277 RIGPRSSR-GHAFNLAAWKGDRSIMLQSFTENIREVVELPSLSMGFLLIPNAFLGSSGQL 335

Query: 238 SLQVCIK 218
            L++CI+
Sbjct: 336 KLELCIR 342


>emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]
          Length = 355

 Score =  227 bits (579), Expect = 4e-57
 Identities = 113/247 (45%), Positives = 151/247 (61%), Gaps = 2/247 (0%)
 Frame = -3

Query: 952 NATGSLQVVLNDPDVLDCPICLDPLCTPVFQCENGHIACASCCSKVKRKCPSCCMPIGYN 773
           N   S+ V+L DP+VLDC ICL+PL  PVFQCENGHIAC+SCC+K+  +CPSC  PIGYN
Sbjct: 97  NRDASVSVILTDPEVLDCSICLEPLSVPVFQCENGHIACSSCCTKLSNRCPSCSWPIGYN 156

Query: 772 RCRAIEKVIESVRVSCKNSRYGCKEMMLYNKKSEHEQKCPHATCFCPHPTCPFAGSSKNL 593
           RCRAIEKV+ESV+VSC+N+ YGCKE + Y KK +HE  C +  C CPH  C F GSSK L
Sbjct: 157 RCRAIEKVLESVKVSCQNTAYGCKETVSYXKKXDHEVTCNYVPCSCPHSNCNFRGSSKQL 216

Query: 592 YLHFGVQHAASATRFTYNTTFSLRIETNQKHKI-LQEQHESVIFILNHEVQEHDRGFNVD 416
             HF  +H  S  RF YN+ F + +E N   K  + E  E  +FI++  +Q+      V 
Sbjct: 217 AQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKFCILEAKEGALFIVSSSIQQLGHAVTVC 276

Query: 415 CIGPSTLKTAFVYQLTAKNMEASLSLQGVPETYSKWSE-HNLRKNYLKVPSEFPDYRGFL 239
            IGP + +    + L A   + S+ LQ   E   +     +L   +L +P+ F    G L
Sbjct: 277 RIGPRSSR-GHAFNLAAWKGDRSIMLQSFTENIREVVXLPSLSMGFLLIPNAFLGSSGQL 335

Query: 238 SLQVCIK 218
            L++CI+
Sbjct: 336 KLELCIR 342


>gb|AFK36482.1| unknown [Lotus japonicus]
          Length = 281

 Score =  226 bits (575), Expect = 1e-56
 Identities = 104/241 (43%), Positives = 160/241 (66%)
 Frame = -3

Query: 940 SLQVVLNDPDVLDCPICLDPLCTPVFQCENGHIACASCCSKVKRKCPSCCMPIGYNRCRA 761
           S+ V++ DPDVLDC IC +PL  PVFQCENGH+AC+SCC++++ KCP C MPIGYNRCRA
Sbjct: 41  SVPVIITDPDVLDCCICYEPLSVPVFQCENGHVACSSCCARLRNKCPMCLMPIGYNRCRA 100

Query: 760 IEKVIESVRVSCKNSRYGCKEMMLYNKKSEHEQKCPHATCFCPHPTCPFAGSSKNLYLHF 581
           +EK++ES+++SC N++YGCKE+  Y+ KS+H ++C +    CPH  C F  SSK L LH 
Sbjct: 101 MEKLLESIKISCLNAKYGCKEVFSYSMKSDHAKECVYIPILCPHTDCDFVASSKELSLHV 160

Query: 580 GVQHAASATRFTYNTTFSLRIETNQKHKILQEQHESVIFILNHEVQEHDRGFNVDCIGPS 401
             +H  S  +FTY+   ++ + T+QK  +LQEQ+++ +FI++++++      ++ CIGP 
Sbjct: 161 SHRHVGSGVQFTYDKFITVFLNTDQKEIVLQEQNDAHLFIVHNKLELLGNTVHISCIGPK 220

Query: 400 TLKTAFVYQLTAKNMEASLSLQGVPETYSKWSEHNLRKNYLKVPSEFPDYRGFLSLQVCI 221
           ++   F Y + A++  ++L LQ V +       H     +L +PS+F    G L L + I
Sbjct: 221 SM-AGFHYDILARSRGSTLILQSVTKIIQAIG-HASSSVFLLIPSKFFGC-GQLKLDIRI 277

Query: 220 K 218
           K
Sbjct: 278 K 278


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