BLASTX nr result

ID: Atractylodes22_contig00005184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00005184
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD43758.1| putative protein [Arabidopsis thaliana]                60   2e-07
gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis...    60   2e-07
ref|NP_198048.1| F-box/kelch-repeat protein [Arabidopsis thalian...    60   2e-07
ref|XP_002874330.1| kelch repeat-containing F-box family protein...    59   5e-07
emb|CBI24318.3| unnamed protein product [Vitis vinifera]               59   5e-07

>dbj|BAD43758.1| putative protein [Arabidopsis thaliana]
          Length = 412

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +3

Query: 45  SYSALSSHARVAAIGRWIYIIGKTAVLRCDAWTGTVTPRSKMSVLRKKFAVAVV 206
           SY +LS HAR AAIG  +Y++ + AVLR D+W GT+  RS M   RKKFA+AVV
Sbjct: 136 SYGSLS-HARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSPMIFPRKKFAIAVV 188


>gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis thaliana]
          Length = 704

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +3

Query: 45  SYSALSSHARVAAIGRWIYIIGKTAVLRCDAWTGTVTPRSKMSVLRKKFAVAVV 206
           SY +LS HAR AAIG  +Y++ + AVLR D+W GT+  RS M   RKKFA+AVV
Sbjct: 137 SYGSLS-HARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSPMIFPRKKFAIAVV 189


>ref|NP_198048.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75127127|sp|Q6NPN5.1|FK113_ARATH RecName:
           Full=F-box/kelch-repeat protein At5g26960
           gi|38603834|gb|AAR24662.1| At5g26960 [Arabidopsis
           thaliana] gi|332006251|gb|AED93634.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
          Length = 413

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +3

Query: 45  SYSALSSHARVAAIGRWIYIIGKTAVLRCDAWTGTVTPRSKMSVLRKKFAVAVV 206
           SY +LS HAR AAIG  +Y++ + AVLR D+W GT+  RS M   RKKFA+AVV
Sbjct: 137 SYGSLS-HARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSPMIFPRKKFAIAVV 189


>ref|XP_002874330.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320167|gb|EFH50589.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/48 (58%), Positives = 35/48 (72%)
 Frame = +3

Query: 63  SHARVAAIGRWIYIIGKTAVLRCDAWTGTVTPRSKMSVLRKKFAVAVV 206
           SHAR AAIG  +Y++ + AVLR D+W GT+  RS M   RKKFA+AVV
Sbjct: 139 SHARAAAIGPRVYVVSRNAVLRYDSWMGTLNLRSPMLFPRKKFAIAVV 186


>emb|CBI24318.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = +3

Query: 63  SHARVAAIGRWIYIIGKTAVLRCDAWTGTVTPRSKMSVLRKKFAVAVV 206
           SH+R++AIGR IYIIG+  ++R DAWTG +T ++ M   RKKFA A+V
Sbjct: 138 SHSRISAIGRGIYIIGRREMVRYDAWTGALTAKAGMVFPRKKFAAAMV 185


Top