BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004490
         (4217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1438   0.0  
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1404   0.0  
ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...  1369   0.0  
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1338   0.0  
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1338   0.0  

>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1438 bits (3722), Expect = 0.0
 Identities = 716/1123 (63%), Positives = 872/1123 (77%), Gaps = 2/1123 (0%)
 Frame = +3

Query: 63   MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 242
            M VE+R TATVRVSNIP++  AK L  F ES  GK +VFAC+I S+HKNWKSRG GRVQF
Sbjct: 1    MGVEKRVTATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQF 60

Query: 243  ETLESKSKAMSLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 422
            ET +SK +++SLS QG L FKG  L L+ S DD+I RP++ + R + G L TG+L   D 
Sbjct: 61   ETSQSKLQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDY 120

Query: 423  MFVLEAWDDVKSWVLPERKTLEFWVRHC-GETYRMELQFSDVLEASPCSLDNQQPNAAIL 599
            M VLE W++VK+ ++PERK+LEFWV H  GE YR+E+QF D++E   CSL++++   A+L
Sbjct: 121  MEVLETWENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLEDEK--TALL 178

Query: 600  LKLKHAPKLYQRLSGSKVSARFSSDRYHTCKEDFEFTWVRTTDFSSRKSIGQSCTLCLEF 779
            LKLKHAPKLYQR+SG  V+++FSSDRYH C+ED EF WVRTTDFS+ KSIG S + C E 
Sbjct: 179  LKLKHAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEI 238

Query: 780  KQDCSASDSFTSLPFYIKDLIKLSMKDGEEFHSSFDIVPLVRCEPELELPYEILFQLNSL 959
            +    +SD  + LP+   D++ L + +  + +S+ ++VPL     +L+LPYEILFQLNSL
Sbjct: 239  EDGLLSSDLLSGLPYCNNDVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSL 298

Query: 960  VQTQKLSLASVDCDLIKFIISQDQDSVMTVLKRMHKSHSMCYDPIVFIKDKVDALSKTVK 1139
            + T K+SL +V  DLI+ +   + D+ M +L++MHK  S C++P+ FIK ++  L K  K
Sbjct: 299  IHTHKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSK 358

Query: 1140 I-PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVE 1316
              PS  +S+  +QN +MS+HRV +TP+K+YCLGPELE SNYIVK+++ +ASDFLRVTFVE
Sbjct: 359  NQPSSSYSRLVNQN-MMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVE 417

Query: 1317 EDWGKLQANVISTSLQHGIFSKPHRTKVYNRALHIMINGLCIGSKKFEFLAFSASQLRSN 1496
            EDWGKL  N IS S++ GIF+KP+RTK+Y+R L I+ +GL IGSK+F FLAFSASQLRSN
Sbjct: 418  EDWGKLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSN 477

Query: 1497 SVWMFASNEYVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDI 1676
            SVWMFASNE+V AE IR WMGCFN IRSVSKCAARMGQLFSTS QT+EV   HVEI+PDI
Sbjct: 478  SVWMFASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDI 537

Query: 1677 EVKTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKL 1856
            EV +DGV YCFSDGIGKIS +FA +VA K GL +TPSAFQIRYGGYKGVIAVDRNSF+KL
Sbjct: 538  EVTSDGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKL 597

Query: 1857 SLRKSMLKFNSKNRMLNVTKHSESQSCYLNREIVTLMSTLGVEDDAFLALQDVQLRILNA 2036
            SLR SMLKF SKNRMLN+TK S++  CYLNREIV L+STLGVED  F  L D  L +L  
Sbjct: 598  SLRGSMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGK 657

Query: 2037 MLYSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXXRTRCR 2216
            ML + E AL VL+ +G  DVK IL++ML QGY PN EPY                R+RCR
Sbjct: 658  MLTTNEAALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCR 717

Query: 2217 IFVPKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVT 2396
            IF+ KGR+LVGCLDE+G+L+YGQVY RIT+TK EL+S +  +F+K+DETT+VV G VVVT
Sbjct: 718  IFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETTAVVRGNVVVT 777

Query: 2397 RNPCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDE 2576
            +NPCLHPGDVRVLEAVYE+AL+EK + DCI+FPQKGERPHPNECSGGDLDGDLYFISWDE
Sbjct: 778  KNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDE 837

Query: 2577 SLVPPQTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEK 2756
            +L+P QTVTPMDYTGRR R+MDH+VTL+EI RFFVDYM SDTLGAISTAHLVHAD EP+K
Sbjct: 838  NLIPRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDK 897

Query: 2757 ALSSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYR 2936
            AL+ KCLQLATLHSMAVDFAKTGA AEMPR LKPRE+PDF+ RWDKPMYIS+G LGKLYR
Sbjct: 898  ALNPKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYR 957

Query: 2937 ATKESELLQISASAFSATAIEDAYDQDLEVTGFDDFIEIAQTHKEMYLDSLTSLMNYYEA 3116
            A   S +   S    S  AI+DAYD  L   G++ FIE A+ HKE YLD + SL+NYY A
Sbjct: 958  AIVNSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGA 1017

Query: 3117 ETEDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWFEGGCKAEDHHKLA 3296
            E E EILTGN+R KS YLQRDNRRY E KDRILV+ + L +E KGWF G CK ++H KLA
Sbjct: 1018 EKEVEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLA 1077

Query: 3297 SAWYHVTYRAGYGNGSSVKCLGFPWIVGHLLLEIKSINSRNMS 3425
            SAWYHVTY   Y  GS+  CLGFPW+VG +LL+IK  N+R ++
Sbjct: 1078 SAWYHVTYHPSYCEGSA-NCLGFPWVVGDILLDIKLHNTRKIT 1119


>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1404 bits (3633), Expect = 0.0
 Identities = 696/1119 (62%), Positives = 864/1119 (77%), Gaps = 1/1119 (0%)
 Frame = +3

Query: 63   MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 242
            MAV ER T  V+VSNIP++  AK+L  FLES  G +T++A EI+++HKNWKSRGFGRVQF
Sbjct: 1    MAVGERPT--VKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQF 58

Query: 243  ETLESKSKAMSLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 422
            ETL++K  A  LS QG L F+G +LS+S + DD+I+RPV+P N+V+ G L  G L   DC
Sbjct: 59   ETLQAKRAADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDC 118

Query: 423  MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAILL 602
            M VLE+W+ VK+ V+PER  +EFWV   GE Y++E+ F DVLE+S C L   + NA +LL
Sbjct: 119  MLVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNA-LLL 177

Query: 603  KLKHAPKLYQRLSGSKVSARFSSDRYHTCKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 782
            KLK+APK++Q+ +G  ++++FS+DRYH  KED EF W+RTTDFSS KS+GQS + C E K
Sbjct: 178  KLKYAPKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIK 237

Query: 783  QDCSASDSFTSLPFYIKDLIKLSMKDGEEFHSSFDIVPLVRCEPELELPYEILFQLNSLV 962
            +   A D F S P+Y KDL +L+++ GE F S   +VPLV+CE   +L YEILFQLNSLV
Sbjct: 238  EGFPALDIFASFPYY-KDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSLV 296

Query: 963  QTQKLSLASVDCDLIKFIISQDQDSVMTVLKRMHKSHSMCYDPIVFIKDKVDALSKTVK- 1139
              QK+SLA+VD DLI+ + +   D+ + +L+++HK  S  YDPI FIK +   ++  +K 
Sbjct: 297  HAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKN 356

Query: 1140 IPSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEE 1319
            +P   HS+  + N +MS HRV +TP+KIYCLGPELE+SNY+VKHY+AYASDF+RV+FVEE
Sbjct: 357  LPPSSHSR-LTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEE 415

Query: 1320 DWGKLQANVISTSLQHGIFSKPHRTKVYNRALHIMINGLCIGSKKFEFLAFSASQLRSNS 1499
            DW KL +N +S S++   F+ P RT++Y+R L I+  G+ IG+K+F+FLAFSASQLRSNS
Sbjct: 416  DWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNS 475

Query: 1500 VWMFASNEYVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIE 1679
            VWMFASN+ V  + IR WMGCF  IRSVSKCAARMGQLFS+S QT+ V    VE+IPDIE
Sbjct: 476  VWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIE 535

Query: 1680 VKTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLS 1859
            V +DG  YCFSDGIGKISLSFAK+VA K GL  TPSAFQIRYGGYKGVIAVDRNSF+KLS
Sbjct: 536  VTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLS 595

Query: 1860 LRKSMLKFNSKNRMLNVTKHSESQSCYLNREIVTLMSTLGVEDDAFLALQDVQLRILNAM 2039
            LR SMLKF S+NRMLNVTK SES  CYLNREIV+L+STLGVED+ F AL + Q+ +L+ M
Sbjct: 596  LRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKM 655

Query: 2040 LYSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXXRTRCRI 2219
            L +R+ AL VL+ +G  D K+IL KMLLQGYEPN EPY                RTRCRI
Sbjct: 656  LTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRI 715

Query: 2220 FVPKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTR 2399
            FVPK R+L+GCLDE+G+L+YGQVYVR+T+TK E + R   +F+K+D+TTSVV+GKV+VT+
Sbjct: 716  FVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTTSVVIGKVIVTK 775

Query: 2400 NPCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDES 2579
            NPCLHPGD+RVL+AVYE+ L+EK   DCI+FPQKGERPHPNECSGGDLDGD +FI WDE 
Sbjct: 776  NPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEG 835

Query: 2580 LVPPQTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKA 2759
            L+P QT  PMDYT RRPR+MDHDVTLEEI +FFVDYM +DTLG ISTAHLVHAD EPEKA
Sbjct: 836  LIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKA 895

Query: 2760 LSSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRA 2939
             S KCL+LATLHSMAVDFAKTGAPAEMPRVLKP+E+PDFM R DKPMYIS G LGKLYRA
Sbjct: 896  RSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRA 955

Query: 2940 TKESELLQISASAFSATAIEDAYDQDLEVTGFDDFIEIAQTHKEMYLDSLTSLMNYYEAE 3119
            T  S + + S+  +S T    AYD DLEV GF+ F+EIA+ HKEMY + + +LMN+Y AE
Sbjct: 956  TIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAE 1015

Query: 3120 TEDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWFEGGCKAEDHHKLAS 3299
            +EDE+LTGN+RNK  YLQRDNRR+ E KDRIL++++ L +EAK W  G CK   H K+AS
Sbjct: 1016 SEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMAS 1075

Query: 3300 AWYHVTYRAGYGNGSSVKCLGFPWIVGHLLLEIKSINSR 3416
            AWYHVTY + + +  +   L FPWIVG +LL IKS NSR
Sbjct: 1076 AWYHVTYHSTF-SSQTPNFLSFPWIVGEVLLVIKSANSR 1113


>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1110

 Score = 1369 bits (3543), Expect = 0.0
 Identities = 678/1111 (61%), Positives = 851/1111 (76%), Gaps = 1/1111 (0%)
 Frame = +3

Query: 90   TVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQFETLESKSKA 269
            +VRV+NIP+++TAK++L +L +  GK +VFA EIS+  KNW SRGFGRVQF +LE K +A
Sbjct: 9    SVRVTNIPQTITAKEILQYLVAQLGKDSVFAIEISTVRKNWNSRGFGRVQFSSLEVKHEA 68

Query: 270  MSLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDCMFVLEAWDD 449
            +SLS +  L  K  NL LS + DD+I RPV+  NR+E+G L  G +++   + VLE W+ 
Sbjct: 69   LSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVGFMKKETTLCVLEYWEG 128

Query: 450  VKSWVLPERKTLEFWVRHCGE-TYRMELQFSDVLEASPCSLDNQQPNAAILLKLKHAPKL 626
            V+ W +PER+ +EFW+R   E  Y++ ++F D+LEA    LD  + NA ++LKL++ P++
Sbjct: 129  VRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGDKVNA-VVLKLRYGPRI 187

Query: 627  YQRLSGSKVSARFSSDRYHTCKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFKQDCSASDS 806
            YQ++SG  ++++FS++RY  CKEDF+F WVRTTD S+ KSIGQS + C E  +   ASD+
Sbjct: 188  YQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDT 247

Query: 807  FTSLPFYIKDLIKLSMKDGEEFHSSFDIVPLVRCEPELELPYEILFQLNSLVQTQKLSLA 986
            F + P+Y +D+ +L ++DGEEF S+ + VPL+RC  + +L YE+LFQLNSLV TQK+SLA
Sbjct: 248  FRNFPYYQEDMNRLDLEDGEEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLA 306

Query: 987  SVDCDLIKFIISQDQDSVMTVLKRMHKSHSMCYDPIVFIKDKVDALSKTVKIPSVVHSKS 1166
            +VD DLIK + +   ++ + +L+++HK    CYDP+ F+K    +L +++  P     KS
Sbjct: 307  AVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQ---SLRESLSSPP----KS 359

Query: 1167 ASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEEDWGKLQANV 1346
             ++N IMS HR  ITP+KI+CLGPE E SNY+VKH++ YASDF+RVTFVEEDW KL AN 
Sbjct: 360  LTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANA 419

Query: 1347 ISTSLQHGIFSKPHRTKVYNRALHIMINGLCIGSKKFEFLAFSASQLRSNSVWMFASNEY 1526
            ISTS+Q GIF+KP RT +Y+R L I+ +G  IG+K+FEFLAFSASQLRSNSVWMFASN  
Sbjct: 420  ISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNNG 479

Query: 1527 VTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEVKTDGVDYC 1706
            V AE IR WMGCF+ IRSVSKCAARMGQLFS+S QT  V    VEIIPDIEV TDG+DYC
Sbjct: 480  VKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDYC 539

Query: 1707 FSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSLRKSMLKFN 1886
            FSDGIGKISLSFAK+VA K GL HTPSAFQIRYGGYKGV+AVDRNSF+KLSLR SMLKF+
Sbjct: 540  FSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKFD 599

Query: 1887 SKNRMLNVTKHSESQSCYLNREIVTLMSTLGVEDDAFLALQDVQLRILNAMLYSREDALT 2066
            S+NRMLNVTK SES  CYLNREI++L+STLGV D+ F ALQ  QL  L  ML ++E AL 
Sbjct: 600  SENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESALD 659

Query: 2067 VLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXXRTRCRIFVPKGRILV 2246
            VL+ L   D K+ILV+MLLQGYEPN EPY                R+RCRIFVPKGRIL+
Sbjct: 660  VLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRILI 719

Query: 2247 GCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRNPCLHPGDV 2426
            GCLDESG+LDYGQVYVRIT+TK EL+  +  +FRK+DE+TS ++G+V VT+NPCLHPGD+
Sbjct: 720  GCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTKNPCLHPGDI 779

Query: 2427 RVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESLVPPQTVTP 2606
            RVLEAVY++ L+EK   DCI+FPQ G RPHPNECSGGDLDGD +FISWDE L+P  T  P
Sbjct: 780  RVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPCHTEAP 839

Query: 2607 MDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKALSSKCLQLA 2786
            MDY G R R+MDH+VTLEEI RFFVDYM +DTLGAISTAHLVHADCEP+KA S KCLQLA
Sbjct: 840  MDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEKCLQLA 899

Query: 2787 TLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRATKESELLQI 2966
            TLHSMAVDFAKTGAPAEMP  LKPRE+PDFM R +K MYIS G LGKLYR   +S   + 
Sbjct: 900  TLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDSTRQER 959

Query: 2967 SASAFSATAIEDAYDQDLEVTGFDDFIEIAQTHKEMYLDSLTSLMNYYEAETEDEILTGN 3146
            S   +S    E  YDQDLEV GF+DF+ IA  +KE Y++ +++LM+YY A+TEDEILTGN
Sbjct: 960  SNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDEILTGN 1019

Query: 3147 IRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWFEGGCKAEDHHKLASAWYHVTYRA 3326
            +R++ +YLQRDNR+YG+ KDRILV+++ L +EAK WFE  C   +H  +ASAWYHVTY  
Sbjct: 1020 LRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYHVTYHP 1079

Query: 3327 GYGNGSSVKCLGFPWIVGHLLLEIKSINSRN 3419
             Y +   + CL FPWIVG +LL IKS+NSRN
Sbjct: 1080 TYFH-ERMNCLSFPWIVGDILLNIKSLNSRN 1109


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 658/1118 (58%), Positives = 846/1118 (75%)
 Frame = +3

Query: 63   MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 242
            MA  ER+T  +RVSN+P S  A+DLL+FL S  G  +VFA EI ++ KNWKSRG GRVQF
Sbjct: 1    MAQPERST--LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58

Query: 243  ETLESKSKAMSLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 422
             TLE+K+KAMSLS Q  L F   NL  S   DD+++RPV   NR E+G L  G + + + 
Sbjct: 59   TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 423  MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAILL 602
            M VLE+W+ VK+W++PER+ +EFW+ H  E Y++E+ F ++LE +   L  ++ NA +LL
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNA-LLL 177

Query: 603  KLKHAPKLYQRLSGSKVSARFSSDRYHTCKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 782
            KLK+AP++Y+++SGS +++RFSS RY  C ED+++ WVRTT+FS  +S+GQS + C E +
Sbjct: 178  KLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVE 237

Query: 783  QDCSASDSFTSLPFYIKDLIKLSMKDGEEFHSSFDIVPLVRCEPELELPYEILFQLNSLV 962
            +D  ASD F+  PFY +    + ++DGEEF S+ +IVPL++      L YE+ +QLNSLV
Sbjct: 238  EDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLV 297

Query: 963  QTQKLSLASVDCDLIKFIISQDQDSVMTVLKRMHKSHSMCYDPIVFIKDKVDALSKTVKI 1142
              QK+SL++ + DLI F+ + D D+ + VL+R+H+   +CYDP+ F+K ++    +  K 
Sbjct: 298  HMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKS 357

Query: 1143 PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEED 1322
                  K  S N +M+ +RV +TP++IYCLGPELE SNY+VK++S+YASDF+RVTFVEED
Sbjct: 358  LPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEED 416

Query: 1323 WGKLQANVISTSLQHGIFSKPHRTKVYNRALHIMINGLCIGSKKFEFLAFSASQLRSNSV 1502
            W KL A  ++TS+Q GI SKP+RT++Y+R + ++ +G+ IG+K+FEFLAFSASQLRSNSV
Sbjct: 417  WSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSV 476

Query: 1503 WMFASNEYVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEV 1682
            WMFAS++ + AE IR WMGCF  IRS+SKCAARMGQLFS+S QT+ V    VEIIPDIEV
Sbjct: 477  WMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEV 536

Query: 1683 KTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSL 1862
             TDG+DYCFSDGIGKISLSFA++VA K G+ H PSAFQIRYGGYKGVIAVDRNSF+KLSL
Sbjct: 537  NTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSL 596

Query: 1863 RKSMLKFNSKNRMLNVTKHSESQSCYLNREIVTLMSTLGVEDDAFLALQDVQLRILNAML 2042
            R SMLKF SKN+MLNVTK  +S  CYLNREI TL+STLGV+D++F ALQ  QL +L  ML
Sbjct: 597  RDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRML 656

Query: 2043 YSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXXRTRCRIF 2222
              ++ AL VL+     D  +ILV+ML  GYEPN EPY                R+RCRIF
Sbjct: 657  TDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIF 716

Query: 2223 VPKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRN 2402
            VPKGRIL+GCLDE+G+L+YGQVY  ITLTK+EL++R   YF  +DET S+++GKVVVT+N
Sbjct: 717  VPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILLGKVVVTKN 776

Query: 2403 PCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESL 2582
            PCLHPGDVRVLEA++ + L+EK   DC++FPQKG RPH NECSGGDLDGDLYFISWDE+L
Sbjct: 777  PCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENL 836

Query: 2583 VPPQTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKAL 2762
            +PP+T  PMDYTGRRPR+MDHDV LEEI +FFVDYM +DTLGAISTAHLVHAD EP+KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 2763 SSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRAT 2942
            S+KCL+LA LHSMAVDFAKTGAPAEMPRVLKPRE+PDFM R+DKPMYIS   LGKLYRA 
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 2943 KESELLQISASAFSATAIEDAYDQDLEVTGFDDFIEIAQTHKEMYLDSLTSLMNYYEAET 3122
             +S   + S   +S  A    YD DLEV GF+ F+EIA+T+KEMY++ ++ LMNYY AE 
Sbjct: 957  VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 3123 EDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWFEGGCKAEDHHKLASA 3302
            EDEIL G++R+++SYLQRDNR+YG+ KDRIL++++ L +E K WFE  C   +   +ASA
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASA 1076

Query: 3303 WYHVTYRAGYGNGSSVKCLGFPWIVGHLLLEIKSINSR 3416
            WYHVTY   Y     +  L FPW V  +LL IK++NS+
Sbjct: 1077 WYHVTYHPSYFK-EDMFYLSFPWAVSDVLLNIKAMNSK 1113


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1338 bits (3463), Expect = 0.0
 Identities = 658/1118 (58%), Positives = 845/1118 (75%)
 Frame = +3

Query: 63   MAVEERATATVRVSNIPRSVTAKDLLHFLESHTGKSTVFACEISSDHKNWKSRGFGRVQF 242
            MA  ER+T  +RVSN+P S  A+DLL+FL S  G  +VFA EI ++ KNWKSRG GRVQF
Sbjct: 1    MAQPERST--LRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQF 58

Query: 243  ETLESKSKAMSLSRQGGLCFKGFNLSLSHSLDDVILRPVQPHNRVEHGFLRTGLLQRRDC 422
             TLE+K+KAMSLS Q  L F   NL  S   DD+++RPV   NR E+G L  G + + + 
Sbjct: 59   TTLEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 423  MFVLEAWDDVKSWVLPERKTLEFWVRHCGETYRMELQFSDVLEASPCSLDNQQPNAAILL 602
            M VLE+W+ VK+W++PER+ +EFW+ H  E Y++E+ F ++LE +   L  ++ NA +LL
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNA-LLL 177

Query: 603  KLKHAPKLYQRLSGSKVSARFSSDRYHTCKEDFEFTWVRTTDFSSRKSIGQSCTLCLEFK 782
            KLK+AP++Y+++SGS +++RFSS RY  C ED+++ WVRTT+FS  +S+GQS + C E +
Sbjct: 178  KLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVE 237

Query: 783  QDCSASDSFTSLPFYIKDLIKLSMKDGEEFHSSFDIVPLVRCEPELELPYEILFQLNSLV 962
            +D  ASD F+  PFY +    + ++DGEEF S+ +IVPL++      L YE+ +QLNSLV
Sbjct: 238  EDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLV 297

Query: 963  QTQKLSLASVDCDLIKFIISQDQDSVMTVLKRMHKSHSMCYDPIVFIKDKVDALSKTVKI 1142
              QK+SL++ + DLI F+ + D D+ + VL+R+H+   +CYDP+ F+K ++    +  K 
Sbjct: 298  HMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKS 357

Query: 1143 PSVVHSKSASQNKIMSIHRVYITPTKIYCLGPELEASNYIVKHYSAYASDFLRVTFVEED 1322
                  K  S N +M+ +RV +TP++IYCLGPELE SNY+VK++S+YASDF+RVTFVEED
Sbjct: 358  LPPSSQKRLSNN-VMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEED 416

Query: 1323 WGKLQANVISTSLQHGIFSKPHRTKVYNRALHIMINGLCIGSKKFEFLAFSASQLRSNSV 1502
            W KL A  ++TS+Q GI SKP+RT++Y+R + ++ +G+ IG+K+FEFLAFSASQLRSNSV
Sbjct: 417  WSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSV 476

Query: 1503 WMFASNEYVTAESIRNWMGCFNSIRSVSKCAARMGQLFSTSKQTIEVLPHHVEIIPDIEV 1682
            WMFAS++ + AE IR WMGCF  IRS+SKCAARMGQLFS+S QT+ V    VEIIPDIEV
Sbjct: 477  WMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEV 536

Query: 1683 KTDGVDYCFSDGIGKISLSFAKEVASKYGLKHTPSAFQIRYGGYKGVIAVDRNSFKKLSL 1862
             TDG+DYCFSDGIGKISLSFA++VA K G+ H PSAFQIRYGGYKGVIAVDRNSF+KLSL
Sbjct: 537  NTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSL 596

Query: 1863 RKSMLKFNSKNRMLNVTKHSESQSCYLNREIVTLMSTLGVEDDAFLALQDVQLRILNAML 2042
            R SMLKF SKN+MLNVTK  +S  CYLNREI TL+STLGV+D++F ALQ  QL +L  ML
Sbjct: 597  RDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRML 656

Query: 2043 YSREDALTVLDGLGSYDVKDILVKMLLQGYEPNREPYXXXXXXXXXXXXXXXXRTRCRIF 2222
              ++ AL VL+     D  +ILV+ML  GYEPN EPY                R+RCRIF
Sbjct: 657  TDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIF 716

Query: 2223 VPKGRILVGCLDESGVLDYGQVYVRITLTKTELRSREHRYFRKMDETTSVVMGKVVVTRN 2402
            VPKGRIL+GCLDE+G+L+YGQVY  ITLTK+EL+SR   YF  +DET S+++GKVVVT+N
Sbjct: 717  VPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKN 776

Query: 2403 PCLHPGDVRVLEAVYELALDEKDYKDCIVFPQKGERPHPNECSGGDLDGDLYFISWDESL 2582
            PCLHPGDVRVLEA++ + L+EK   DC++FPQKG RPH NECSGGDLDGDLYFISWDE+L
Sbjct: 777  PCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENL 836

Query: 2583 VPPQTVTPMDYTGRRPRLMDHDVTLEEIGRFFVDYMTSDTLGAISTAHLVHADCEPEKAL 2762
            +PP+T  PMDYTGRRPR+MDHDV LEEI +FFVDYM +DTLGAISTAHLVHAD EP+KAL
Sbjct: 837  IPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKAL 896

Query: 2763 SSKCLQLATLHSMAVDFAKTGAPAEMPRVLKPREYPDFMGRWDKPMYISQGPLGKLYRAT 2942
            S+KCL+LA LHSMAVDFAKTGAPAEMPRVLKPRE+PDFM R+DKPMYIS   LGKLYRA 
Sbjct: 897  SAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAA 956

Query: 2943 KESELLQISASAFSATAIEDAYDQDLEVTGFDDFIEIAQTHKEMYLDSLTSLMNYYEAET 3122
             +S   + S   +S  A    YD DLEV GF+ F+EIA+T+KEMY++ ++ LMNYY AE 
Sbjct: 957  VKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEY 1016

Query: 3123 EDEILTGNIRNKSSYLQRDNRRYGETKDRILVAIRQLHREAKGWFEGGCKAEDHHKLASA 3302
            EDEIL G++R+++SYLQRDNR+YG+ KDRIL++++ L +E K WFE  C   +   +ASA
Sbjct: 1017 EDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASA 1076

Query: 3303 WYHVTYRAGYGNGSSVKCLGFPWIVGHLLLEIKSINSR 3416
            WYHVTY   Y     +    FPW V  +LL IK++NS+
Sbjct: 1077 WYHVTYHPSYFK-EDMFYFSFPWAVSDVLLNIKAMNSK 1113