BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004449
         (1275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   589   e-166
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   575   e-162
ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-li...   569   e-160
ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   563   e-158

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  589 bits (1519), Expect = e-166
 Identities = 297/337 (88%), Positives = 321/337 (95%)
 Frame = -3

Query: 1273 VASGGAPPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGK 1094
            V  GG  PP  KATPWVEK+RPQSLADVAAHRDI+DTIDRLTSEN++PHLLLYGPPGTGK
Sbjct: 26   VVVGG--PPDRKATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENRLPHLLLYGPPGTGK 83

Query: 1093 TSTILAVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLL 914
            TSTILAVARKL+G Q HNM+LELNASD+RGIDVVRQQIQDFASTQSFSFGAK+SVKLVLL
Sbjct: 84   TSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKSSVKLVLL 143

Query: 913  DEADAMTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTE 734
            DEADAMTKDAQFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLDAVHVTE
Sbjct: 144  DEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTE 203

Query: 733  RLKHVITAEGLDVTEDGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 554
            RLKHVI AE LDV+E GLAALVRLS+GDMRKALNILQSTHMASQQITEEAVYLCTGNPLP
Sbjct: 204  RLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 263

Query: 553  KDIEQISYWLLNEPFSYSFQKISDIKATKGLAIVDIVREVTMFVFRIKMPSDVRIQLIND 374
            KDIEQISYWLLNE F+ SF +IS++K  KGLA+VD+VREVTMFVF+IKMPSDVR+QLIND
Sbjct: 264  KDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVVREVTMFVFKIKMPSDVRVQLIND 323

Query: 373  LADIEYRLSFGCSDKLQLGSVIATFTRARSALVAAAK 263
            LADIEYRLSFGC+DKLQLGS+IA+FTRAR+ALVAAAK
Sbjct: 324  LADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK 360


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540562|gb|EEF42129.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 360

 Score =  575 bits (1483), Expect = e-162
 Identities = 287/327 (87%), Positives = 315/327 (96%)
 Frame = -3

Query: 1243 TKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTILAVARK 1064
            TKATPWVEK+RPQSLADVAAHRDI+DTIDRLT+EN++PHLLLYGPPGTGKTSTILAVARK
Sbjct: 34   TKATPWVEKYRPQSLADVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARK 93

Query: 1063 LFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDA 884
            L+G Q HNM+LELNASD+RGIDVVRQQIQDFASTQSFSF AK++VKLVLLDEADAMTKDA
Sbjct: 94   LYGVQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDA 153

Query: 883  QFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVITAEG 704
            QFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLD +HVT+RLKHVI AEG
Sbjct: 154  QFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEG 213

Query: 703  LDVTEDGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWL 524
            LDV E GLAA+VRLSNGDMRKALNILQSTHMASQQITEEAV+LCTGNPLPKDI+QISYWL
Sbjct: 214  LDVPEPGLAAVVRLSNGDMRKALNILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWL 273

Query: 523  LNEPFSYSFQKISDIKATKGLAIVDIVREVTMFVFRIKMPSDVRIQLINDLADIEYRLSF 344
            LNE F+ SF++IS+IK  KGLA+VDIVREVTMFVF+IKMPSDVR+QLIND+ADIEYRLSF
Sbjct: 274  LNESFAESFKRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSF 333

Query: 343  GCSDKLQLGSVIATFTRARSALVAAAK 263
            GCSDKLQLGS++A+FT ARSALVAAAK
Sbjct: 334  GCSDKLQLGSLVASFTWARSALVAAAK 360


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 5-like [Glycine max]
          Length = 361

 Score =  569 bits (1467), Expect = e-160
 Identities = 287/336 (85%), Positives = 312/336 (92%)
 Frame = -3

Query: 1273 VASGGAPPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGK 1094
            V   G PP   KA PWVEK+RPQSL DVAAHRDI+DTIDRLT+EN++PHLLLYGPPGTGK
Sbjct: 25   VVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGK 84

Query: 1093 TSTILAVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLL 914
            TSTILAVARKL+GSQ  NM+LELNASD+RGIDVVRQQIQDFASTQS SFG K+SVKLVLL
Sbjct: 85   TSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKSSVKLVLL 144

Query: 913  DEADAMTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTE 734
            DEADAMTKDAQFALRRVIE+YTK+TRFALICN+VNKIIPALQSRCTRFRFAPLDAVHVTE
Sbjct: 145  DEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTE 204

Query: 733  RLKHVITAEGLDVTEDGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 554
            RLKHVI AEGLDV + GLAA VRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP
Sbjct: 205  RLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 264

Query: 553  KDIEQISYWLLNEPFSYSFQKISDIKATKGLAIVDIVREVTMFVFRIKMPSDVRIQLIND 374
            KDIE ISYWLLNE F+ SF++I ++K  KGLA++DIVREVTMFVF+IKMPS VR+QL+ND
Sbjct: 265  KDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDIVREVTMFVFKIKMPSAVRVQLMND 324

Query: 373  LADIEYRLSFGCSDKLQLGSVIATFTRARSALVAAA 266
            LADIEYRLSFGC+DKLQLGSVIA+FTRARSALVAAA
Sbjct: 325  LADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360


>ref|XP_002302226.1| predicted protein [Populus trichocarpa] gi|222843952|gb|EEE81499.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  566 bits (1459), Expect = e-159
 Identities = 284/331 (85%), Positives = 312/331 (94%)
 Frame = -3

Query: 1258 APPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGKTSTIL 1079
            A PP  KATPWVEK+RPQSLADVAAHRDIIDTIDRLTSEN++PHLLLYGPPGTGKTSTIL
Sbjct: 32   ATPPGGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPHLLLYGPPGTGKTSTIL 91

Query: 1078 AVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 899
            AVARKL+G+Q HNM+LELNASD+RGIDVVR+QIQDFASTQSFSFGAKASVKLVLLDEADA
Sbjct: 92   AVARKLYGAQYHNMILELNASDDRGIDVVRKQIQDFASTQSFSFGAKASVKLVLLDEADA 151

Query: 898  MTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTERLKHV 719
            MTKDAQFALRRVIE+YTKNTRFALICN+VNKIIPALQSRCTRFRFAPLD +HV ERLKHV
Sbjct: 152  MTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDPMHVGERLKHV 211

Query: 718  ITAEGLDVTEDGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQ 539
            I AEGLDV E GL AL  LSNGDMRKALNILQSTHMASQQITEE VYLCTGNPLP+D++Q
Sbjct: 212  IEAEGLDVPESGLEALKCLSNGDMRKALNILQSTHMASQQITEETVYLCTGNPLPQDVQQ 271

Query: 538  ISYWLLNEPFSYSFQKISDIKATKGLAIVDIVREVTMFVFRIKMPSDVRIQLINDLADIE 359
            I++WLLNE F+ S+++IS+IK  KGLA+VDIVREVTMFVF+IKM SD+R+ LINDLADIE
Sbjct: 272  ITHWLLNESFAESYKRISEIKTRKGLALVDIVREVTMFVFKIKMQSDIRVPLINDLADIE 331

Query: 358  YRLSFGCSDKLQLGSVIATFTRARSALVAAA 266
            YRLSFGC+DKLQLGS+IA+FTRARSALVAAA
Sbjct: 332  YRLSFGCNDKLQLGSLIASFTRARSALVAAA 362


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  563 bits (1451), Expect = e-158
 Identities = 283/336 (84%), Positives = 312/336 (92%)
 Frame = -3

Query: 1273 VASGGAPPPHTKATPWVEKFRPQSLADVAAHRDIIDTIDRLTSENKMPHLLLYGPPGTGK 1094
            V + G P    KA+ WVEK+RPQSL DVAAHRDI+DTIDRLT+EN++PHLLLYGPPGTGK
Sbjct: 19   VIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGK 78

Query: 1093 TSTILAVARKLFGSQMHNMVLELNASDERGIDVVRQQIQDFASTQSFSFGAKASVKLVLL 914
            TSTILAVARKL+G+Q HNM+LELNASD+RGIDVVRQQIQDFASTQS SFG K SVKLVLL
Sbjct: 79   TSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLL 138

Query: 913  DEADAMTKDAQFALRRVIERYTKNTRFALICNNVNKIIPALQSRCTRFRFAPLDAVHVTE 734
            DEADAMTKDAQFALRRVIE+YTK+TRFALICN+VNKIIPALQSRCTRFRFAPLDAVHVTE
Sbjct: 139  DEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTE 198

Query: 733  RLKHVITAEGLDVTEDGLAALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 554
            RLKHVI AE LDV + GL+ALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP
Sbjct: 199  RLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLP 258

Query: 553  KDIEQISYWLLNEPFSYSFQKISDIKATKGLAIVDIVREVTMFVFRIKMPSDVRIQLIND 374
            KDIEQISYWLLNE +S SF++I D+K  KGLA++DIVREVTMFVF+I MPS VR+QL+ND
Sbjct: 259  KDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTMFVFKINMPSAVRVQLVND 318

Query: 373  LADIEYRLSFGCSDKLQLGSVIATFTRARSALVAAA 266
            LADIEYRLSFGC+DKLQLGSV+A+FTRARSA+VAAA
Sbjct: 319  LADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAA 354