BLASTX nr result

ID: Atractylodes22_contig00004353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004353
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucu...   131   1e-28
ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250...   130   4e-28
ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arab...   129   1e-27
ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414...   129   1e-27
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   128   1e-27

>ref|XP_004135645.1| PREDICTED: probable histone H2AXb-like [Cucumis sativus]
           gi|449485770|ref|XP_004157270.1| PREDICTED: probable
           histone H2AXb-like [Cucumis sativus]
          Length = 140

 Score =  131 bits (330), Expect = 1e-28
 Identities = 65/68 (95%), Positives = 66/68 (97%)
 Frame = -2

Query: 466 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHHNLLPKKVGKEKGD 287
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH  LLPKKVGK+KGD
Sbjct: 73  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKDKGD 132

Query: 286 IGSASQEF 263
           IGSASQEF
Sbjct: 133 IGSASQEF 140



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 699 KGGRGKPKATKSVSRSSKAGLQFPVGRIA 613
           KGGRGKPKATKSVSRS KAGLQFPVGRIA
Sbjct: 9   KGGRGKPKATKSVSRSHKAGLQFPVGRIA 37


>ref|XP_002328535.1| histone 2 [Populus trichocarpa] gi|222838250|gb|EEE76615.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  130 bits (326), Expect = 4e-28
 Identities = 65/68 (95%), Positives = 65/68 (95%)
 Frame = -2

Query: 466 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHHNLLPKKVGKEKGD 287
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH  LLPKKVGK KGD
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGD 134

Query: 286 IGSASQEF 263
           IGSASQEF
Sbjct: 135 IGSASQEF 142



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 31/39 (79%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -3

Query: 726 MSSKDADVK-KGGRGKPKATKSVSRSSKAGLQFPVGRIA 613
           MSSK+     KGGRGKPKA+KSVSRS KAGLQFPVGRIA
Sbjct: 1   MSSKEGGASTKGGRGKPKASKSVSRSHKAGLQFPVGRIA 39


>ref|XP_002892475.1| hypothetical protein ARALYDRAFT_888122 [Arabidopsis lyrata subsp.
           lyrata] gi|297338317|gb|EFH68734.1| hypothetical protein
           ARALYDRAFT_888122 [Arabidopsis lyrata subsp. lyrata]
          Length = 142

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/68 (94%), Positives = 64/68 (94%)
 Frame = -2

Query: 466 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHHNLLPKKVGKEKGD 287
           GNAARDNKK RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH NLLP KVGK KGD
Sbjct: 75  GNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQNLLPSKVGKNKGD 134

Query: 286 IGSASQEF 263
           IGSASQEF
Sbjct: 135 IGSASQEF 142



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 699 KGGRGKPKATKSVSRSSKAGLQFPVGRIA 613
           KGGRGKPKATKSVSRSSKAGLQFPVGRIA
Sbjct: 11  KGGRGKPKATKSVSRSSKAGLQFPVGRIA 39


>ref|XP_002319038.1| histone 2 [Populus trichocarpa] gi|222857414|gb|EEE94961.1| histone
           2 [Populus trichocarpa]
          Length = 142

 Score =  129 bits (323), Expect = 1e-27
 Identities = 64/68 (94%), Positives = 65/68 (95%)
 Frame = -2

Query: 466 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHHNLLPKKVGKEKGD 287
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH  LLPKK+GK KGD
Sbjct: 75  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 134

Query: 286 IGSASQEF 263
           IGSASQEF
Sbjct: 135 IGSASQEF 142



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/39 (79%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = -3

Query: 726 MSSKDADVK-KGGRGKPKATKSVSRSSKAGLQFPVGRIA 613
           MSSK+     KGGRGKPKA+KSVSRS KAGLQFPVGRIA
Sbjct: 1   MSSKEGGASTKGGRGKPKASKSVSRSQKAGLQFPVGRIA 39


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  128 bits (322), Expect = 1e-27
 Identities = 64/68 (94%), Positives = 65/68 (95%)
 Frame = -2

Query: 466 GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHHNLLPKKVGKEKGD 287
           GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIH  LLPKKVGK KG+
Sbjct: 73  GNAARDNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGE 132

Query: 286 IGSASQEF 263
           IGSASQEF
Sbjct: 133 IGSASQEF 140



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = -3

Query: 699 KGGRGKPKATKSVSRSSKAGLQFPVGRIA 613
           KGGRGKPKA+KSVSRS KAGLQFPVGRIA
Sbjct: 9   KGGRGKPKASKSVSRSQKAGLQFPVGRIA 37


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