BLASTX nr result

ID: Atractylodes22_contig00004261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004261
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98747.1| tetratricopeptide repeat (TPR)-containing protein...    47   6e-07
ref|XP_002314020.1| predicted protein [Populus trichocarpa] gi|2...    47   1e-06
ref|XP_002298448.1| predicted protein [Populus trichocarpa] gi|2...    45   8e-06
gb|AEL98748.1| tetratricopeptide repeat (TPR)-containing protein...    43   8e-06

>gb|AEL98747.1| tetratricopeptide repeat (TPR)-containing protein, partial [Silene
           latifolia]
          Length = 359

 Score = 46.6 bits (109), Expect(2) = 6e-07
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +3

Query: 3   LDAPEICFFTCYDLLLHPKDG 65
           LDAPE CFFTCYDLLLH KDG
Sbjct: 38  LDAPETCFFTCYDLLLHTKDG 58



 Score = 31.6 bits (70), Expect(2) = 6e-07
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +2

Query: 71  DYHEIFAVADITAGDSSLETIA 136
           DY+EI  VADIT GD SLE ++
Sbjct: 65  DYNEISEVADITTGDCSLEMVS 86


>ref|XP_002314020.1| predicted protein [Populus trichocarpa]
          gi|222850428|gb|EEE87975.1| predicted protein [Populus
          trichocarpa]
          Length = 1343

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +3

Query: 3  LDAPEICFFTCYDLLLHPKDG 65
          LDAPE CFFTCYDLLLH KDG
Sbjct: 36 LDAPETCFFTCYDLLLHTKDG 56



 Score = 30.8 bits (68), Expect(2) = 1e-06
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +2

Query: 65  VGDYHEIFAVADITAGDSSLETIA 136
           + DY+EI  VADIT+G  SLE +A
Sbjct: 61  IEDYNEISEVADITSGGCSLEMVA 84


>ref|XP_002298448.1| predicted protein [Populus trichocarpa] gi|222845706|gb|EEE83253.1|
           predicted protein [Populus trichocarpa]
          Length = 1349

 Score = 45.4 bits (106), Expect(2) = 8e-06
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = +3

Query: 3   LDAPEICFFTCYDLLLHPKDG 65
           LDAPE CF+TCYDLLLH KDG
Sbjct: 39  LDAPETCFYTCYDLLLHTKDG 59



 Score = 28.9 bits (63), Expect(2) = 8e-06
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +2

Query: 71  DYHEIFAVADITAGDSSLETI 133
           DY+EI  VADIT+G  SLE +
Sbjct: 66  DYNEISEVADITSGGCSLEMV 86


>gb|AEL98748.1| tetratricopeptide repeat (TPR)-containing protein, partial [Silene
           latifolia]
          Length = 359

 Score = 43.1 bits (100), Expect(2) = 8e-06
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 3   LDAPEICFFTCYDLLLHPKDG 65
           LDA E CFFTCYDLLLH KDG
Sbjct: 38  LDARETCFFTCYDLLLHTKDG 58



 Score = 31.2 bits (69), Expect(2) = 8e-06
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 71  DYHEIFAVADITAGDSSLETI 133
           DY+EI  VADIT GD SLE +
Sbjct: 65  DYNEISEVADITTGDCSLEMV 85


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