BLASTX nr result

ID: Atractylodes22_contig00004248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004248
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ09698.1| ARGONAUTE 1 [Nicotiana tabacum]                       115   5e-24
gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]                114   1e-23
gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV4...   114   1e-23
ref|XP_002526275.1| eukaryotic translation initiation factor 2c,...   114   1e-23
ref|XP_004137387.1| PREDICTED: protein argonaute 1A-like [Cucumi...   113   1e-23

>dbj|BAJ09698.1| ARGONAUTE 1 [Nicotiana tabacum]
          Length = 1061

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/83 (73%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
 Frame = -3

Query: 417  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDXXXXXXXXXXXXXGV----RTTRAP 250
            TYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSD             GV    R+TRAP
Sbjct: 979  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSVTSAAASNRGGVGAMGRSTRAP 1038

Query: 249  MSSAAVRPLPALKENVKRVMFYC 181
             + AAVRPLPALKENVKRVMFYC
Sbjct: 1039 GAGAAVRPLPALKENVKRVMFYC 1061


>gb|ABC61502.1| AGO1-1, partial [Nicotiana benthamiana]
          Length = 1052

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/83 (72%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
 Frame = -3

Query: 417  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDXXXXXXXXXXXXXGV----RTTRAP 250
            TYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSD             G+    R+TRAP
Sbjct: 970  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDNGSVTSAAASNRGGLGAMGRSTRAP 1029

Query: 249  MSSAAVRPLPALKENVKRVMFYC 181
             + AAVRPLPALKENVKRVMFYC
Sbjct: 1030 GAGAAVRPLPALKENVKRVMFYC 1052


>gb|AFV15377.1| AGO1A [Solanum lycopersicum] gi|409893066|gb|AFV46190.1|
            argonaute1-1, partial [Solanum lycopersicum]
          Length = 1054

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/83 (73%), Positives = 63/83 (75%), Gaps = 4/83 (4%)
 Frame = -3

Query: 417  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDXXXXXXXXXXXXXGV----RTTRAP 250
            TYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSD             GV    R+TRAP
Sbjct: 972  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDGGSVTSGAAPYRGGVGAVGRSTRAP 1031

Query: 249  MSSAAVRPLPALKENVKRVMFYC 181
               AAVRPLPALKENVKRVMFYC
Sbjct: 1032 GVGAAVRPLPALKENVKRVMFYC 1054


>ref|XP_002526275.1| eukaryotic translation initiation factor 2c, putative [Ricinus
            communis] gi|223534406|gb|EEF36112.1| eukaryotic
            translation initiation factor 2c, putative [Ricinus
            communis]
          Length = 1063

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/85 (70%), Positives = 64/85 (75%), Gaps = 6/85 (7%)
 Frame = -3

Query: 417  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDXXXXXXXXXXXXXGV------RTTR 256
            TYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSD             G+      R+TR
Sbjct: 979  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGPVGGRGGMGGGAGARSTR 1038

Query: 255  APMSSAAVRPLPALKENVKRVMFYC 181
             P +SAAVRPLPALKENVKRVMFYC
Sbjct: 1039 GPAASAAVRPLPALKENVKRVMFYC 1063


>ref|XP_004137387.1| PREDICTED: protein argonaute 1A-like [Cucumis sativus]
            gi|449523970|ref|XP_004168996.1| PREDICTED: protein
            argonaute 1A-like [Cucumis sativus]
          Length = 1064

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/81 (74%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
 Frame = -3

Query: 417  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD--XXXXXXXXXXXXXGVRTTRAPMS 244
            TYARCTRSVSIVPPAYYAHLAAFRARFYMEP+TSD               G R+TRAP  
Sbjct: 984  TYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSISSEVAGRGGVGGARSTRAPGL 1043

Query: 243  SAAVRPLPALKENVKRVMFYC 181
            +AAVRPLPALKENVKRVMFYC
Sbjct: 1044 NAAVRPLPALKENVKRVMFYC 1064


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