BLASTX nr result

ID: Atractylodes22_contig00004199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004199
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   127   9e-28
emb|CBI23315.3| unnamed protein product [Vitis vinifera]              127   9e-28
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]   127   9e-28
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...   100   2e-19
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein...    98   6e-19

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
 Frame = +3

Query: 27  IRTGTLSKRWKYVWTSVPTLIFILLYEKRNRPLSDFVSFVDKTLAQCRQSKLRKFAVHTT 206
           + T  LSKRW+++WT VP L+F     +  R    FV+ +DKTL   + S+++KF +  T
Sbjct: 97  VATSILSKRWQFLWTMVPNLVF-----RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFT 151

Query: 207 YDIQFESQVNNWIRYAISCNVEELDLSLSEAEFV----------LNEYFFINSCFTDLKL 356
           Y  QF+S VN WIR+A   NVEEL L     + +          L ++ + NS    L L
Sbjct: 152 YQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSL 211

Query: 357 QGCIFNPTGAISWKRLRSLYISDGNLDEDLIENILSGSPLLETLELSYCYG 509
             C   PT  ISW  L++L I    L +DLIE ILSG P LE+LEL +C+G
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFG 262


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
 Frame = +3

Query: 27  IRTGTLSKRWKYVWTSVPTLIFILLYEKRNRPLSDFVSFVDKTLAQCRQSKLRKFAVHTT 206
           + T  LSKRW+++WT VP L+F     +  R    FV+ +DKTL   + S+++KF +  T
Sbjct: 5   VATSILSKRWQFLWTMVPNLVF-----RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFT 59

Query: 207 YDIQFESQVNNWIRYAISCNVEELDLSLSEAEFV----------LNEYFFINSCFTDLKL 356
           Y  QF+S VN WIR+A   NVEEL L     + +          L ++ + NS    L L
Sbjct: 60  YQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSL 119

Query: 357 QGCIFNPTGAISWKRLRSLYISDGNLDEDLIENILSGSPLLETLELSYCYG 509
             C   PT  ISW  L++L I    L +DLIE ILSG P LE+LEL +C+G
Sbjct: 120 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFG 170


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/171 (40%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
 Frame = +3

Query: 27  IRTGTLSKRWKYVWTSVPTLIFILLYEKRNRPLSDFVSFVDKTLAQCRQSKLRKFAVHTT 206
           + T  LSKRW+++WT VP L+F     +  R    FV+ +DKTL   + S+++KF +  T
Sbjct: 97  VATSILSKRWQFLWTMVPNLVF-----RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFT 151

Query: 207 YDIQFESQVNNWIRYAISCNVEELDLSLSEAEFV----------LNEYFFINSCFTDLKL 356
           Y  QF+S VN WIR+A   NVEEL L     + +          L ++ + NS    L L
Sbjct: 152 YQSQFQSSVNVWIRHATRKNVEELHLQFRVGQHIRSSPMDYAHALPQFLYANSSIVKLSL 211

Query: 357 QGCIFNPTGAISWKRLRSLYISDGNLDEDLIENILSGSPLLETLELSYCYG 509
             C   PT  ISW  L++L I    L +DLIE ILSG P LE+LEL +C+G
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALESLELHHCFG 262


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 7/175 (4%)
 Frame = +3

Query: 6   LPSTESAIRTGTLSKRWKYVWTSVPTLIFILLYEKRNRPLSDFVSFVDKTLAQCRQSKLR 185
           L STE A++TG LSKRW+  WT V  L F   Y   +  L  F  F+  TL     SK+ 
Sbjct: 38  LLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSDEKLKCFSKFIHNTLVLNSCSKIN 97

Query: 186 KFAVHTT-----YDIQFESQVNNWIRYAIS--CNVEELDLSLSEAEFVLNEYFFINSCFT 344
           KF++        Y  +++SQ++  +R+AI     V  LD   S   + L ++F+ N   T
Sbjct: 98  KFSISPRLSSDKYMSEYQSQISLCMRFAIKKEAKVLTLDFHPSNQGYRLPQFFYSNDSVT 157

Query: 345 DLKLQGCIFNPTGAISWKRLRSLYISDGNLDEDLIENILSGSPLLETLELSYCYG 509
           ++ L  C F+    ++W+ L+ L I    L   +I++ILSGSP LE+ EL  C G
Sbjct: 158 EMTLSSCGFSLNADVNWRSLKVLCIQFAYLTNRVIKDILSGSPQLESFELHNCQG 212


>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
           vinifera]
          Length = 665

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 63/186 (33%), Positives = 95/186 (51%), Gaps = 21/186 (11%)
 Frame = +3

Query: 18  ESAIRTGTLSKRWKYVWTSVPTLIFILLYEKRNRPLSDFVSFVDKTLA-QCRQSKLRKFA 194
           ++AIRTG LSKR+ Y W S P L+F    +     + DF++FV++ L       K++KF 
Sbjct: 55  DAAIRTGVLSKRFAYKWASTPNLVFD---QDSEWEIDDFITFVNRALLLHDPNCKVQKFT 111

Query: 195 VHTTYDIQF------ESQVNNWIRYAISCNVEELDLSLSEAE--------------FVLN 314
           ++     Q       E  V  W+R+A    VE+L+L  ++ E              ++L 
Sbjct: 112 IYMDCMDQVIENSLQEDCVTLWLRFATRKGVEKLNLGFNDEEDPLQLWESRYDSYRYLLP 171

Query: 315 EYFFINSCFTDLKLQGCIFNPTGAISWKRLRSLYISDGNLDEDLIENILSGSPLLETLEL 494
           ++ F +S F  L  + C F   G +SW  L+SL I    L+E+ I NIL GSP LE LE 
Sbjct: 172 QFIFRHSSFRKLATRFCNFVTYGVVSWAWLKSLSIGYAELNEETIRNILMGSPALECLEF 231

Query: 495 SYCYGY 512
             C+G+
Sbjct: 232 HRCHGF 237


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