BLASTX nr result

ID: Atractylodes22_contig00004166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004166
         (2409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vini...   177   2e-41
emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]                   176   2e-41
emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]   176   3e-41
ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glyci...   175   6e-41
ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820...   175   6e-41

>ref|XP_002276497.1| PREDICTED: THO complex subunit 4 [Vitis vinifera]
           gi|296087136|emb|CBI33510.3| unnamed protein product
           [Vitis vinifera]
          Length = 269

 Score =  177 bits (448), Expect = 2e-41
 Identities = 85/125 (68%), Positives = 108/125 (86%)
 Frame = -3

Query: 961 PGSFLVCSHQSFRRPKNLPWQRDLLEESLKAAGLPGLDSGAKLCVSNLDIGVTNEDIREL 782
           P S+ +   +S RR K +PWQ DL E+SL+AAGLPGL++G KL +SNLD GVTNEDIREL
Sbjct: 59  PSSYAIA--KSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIREL 115

Query: 781 FSEIGELKRYAIHYDKSGRPNGTAEVMFARRSDAFQALKRYNNVQLDGKPMKIEILGSKS 602
           FSEIG++KRYA+HY+K+GRP+G+AEV++ RRSDAF A+KRYNNV LDGKPMKIEI+GS S
Sbjct: 116 FSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDS 175

Query: 601 EVPLS 587
           ++P+S
Sbjct: 176 DMPVS 180


>emb|CAJ44458.1| ALY protein [Nicotiana benthamiana]
          Length = 275

 Score =  176 bits (447), Expect = 2e-41
 Identities = 88/119 (73%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
 Frame = -3

Query: 934 QSFRRPKNLPWQRD--LLEESLKAAGLP-GLDSGAKLCVSNLDIGVTNEDIRELFSEIGE 764
           +SFRR KNLPWQ    L E+SL+AAG+P GL+SG K+ VSNLD+GVTN DIRELFSEIGE
Sbjct: 63  KSFRRTKNLPWQNGNGLFEDSLRAAGIPSGLESGTKVYVSNLDVGVTNSDIRELFSEIGE 122

Query: 763 LKRYAIHYDKSGRPNGTAEVMFARRSDAFQALKRYNNVQLDGKPMKIEILGSKSEVPLS 587
           L RYAIHYDK+GRP+G AEV+FARRSDA+QALKRYNNVQLDGKPMKIE++   +++PLS
Sbjct: 123 LIRYAIHYDKNGRPSGAAEVVFARRSDAYQALKRYNNVQLDGKPMKIEVVAPPTDMPLS 181


>emb|CAN80452.1| hypothetical protein VITISV_029873 [Vitis vinifera]
          Length = 348

 Score =  176 bits (445), Expect = 3e-41
 Identities = 83/116 (71%), Positives = 104/116 (89%)
 Frame = -3

Query: 934 QSFRRPKNLPWQRDLLEESLKAAGLPGLDSGAKLCVSNLDIGVTNEDIRELFSEIGELKR 755
           +S RR K +PWQ DL E+SL+AAGLPGL++G KL +SNLD GVTNEDIRELFSEIG++KR
Sbjct: 95  RSSRRTK-IPWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKR 153

Query: 754 YAIHYDKSGRPNGTAEVMFARRSDAFQALKRYNNVQLDGKPMKIEILGSKSEVPLS 587
           YA+HY+K+GRP+G+AEV++ RRSDAF A+KRYNNV LDGKPMKIEI+GS S++P+S
Sbjct: 154 YAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVS 209


>ref|XP_003553032.1| PREDICTED: THO complex subunit 4-like [Glycine max]
          Length = 298

 Score =  175 bits (443), Expect = 6e-41
 Identities = 84/125 (67%), Positives = 104/125 (83%)
 Frame = -3

Query: 961 PGSFLVCSHQSFRRPKNLPWQRDLLEESLKAAGLPGLDSGAKLCVSNLDIGVTNEDIREL 782
           P S+ +   +S RR +  PWQ DL E+SL+AAG+ G++ G KL VSNLD GVTNEDIREL
Sbjct: 77  PSSYAIA--KSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIREL 134

Query: 781 FSEIGELKRYAIHYDKSGRPNGTAEVMFARRSDAFQALKRYNNVQLDGKPMKIEILGSKS 602
           FSE+GELKR+A+HYDK+G P+G+AEV++ RRSDAF ALKRYNNV LDGKPMKIEI+GS S
Sbjct: 135 FSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNS 194

Query: 601 EVPLS 587
           E+P+S
Sbjct: 195 ELPIS 199


>ref|XP_003537446.1| PREDICTED: uncharacterized protein LOC100820344 [Glycine max]
          Length = 298

 Score =  175 bits (443), Expect = 6e-41
 Identities = 84/125 (67%), Positives = 104/125 (83%)
 Frame = -3

Query: 961 PGSFLVCSHQSFRRPKNLPWQRDLLEESLKAAGLPGLDSGAKLCVSNLDIGVTNEDIREL 782
           P S+ +   +S RR +  PWQ DL E+SL+AAG+ G++ G KL VSNLD GVTNEDIREL
Sbjct: 78  PSSYAIA--KSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIREL 135

Query: 781 FSEIGELKRYAIHYDKSGRPNGTAEVMFARRSDAFQALKRYNNVQLDGKPMKIEILGSKS 602
           FSE+GELKR+A+HYDK+G P+G+AEV++ RRSDAF ALKRYNNV LDGKPMKIEI+GS S
Sbjct: 136 FSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVLLDGKPMKIEIVGSNS 195

Query: 601 EVPLS 587
           E+P+S
Sbjct: 196 ELPIS 200


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