BLASTX nr result

ID: Atractylodes22_contig00004152 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004152
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis ...   248   9e-64
ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula] ...   246   3e-63
ref|XP_003611166.1| Choline dehydrogenase [Medicago truncatula] ...   245   1e-62
ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis ...   244   1e-62
gb|AFK39106.1| unknown [Medicago truncatula]                          244   1e-62

>ref|XP_003631426.1| PREDICTED: protein HOTHEAD isoform 2 [Vitis vinifera]
          Length = 568

 Score =  248 bits (633), Expect(2) = 9e-64
 Identities = 121/246 (49%), Positives = 165/246 (67%), Gaps = 23/246 (9%)
 Frame = +3

Query: 6    ALNISVVLEQPLVGNNVSDNPQNAVFVPAPVAIERSTTQVVGITEFGSYIEEGGGVNFLF 185
            A NIS+VL+ P+VG  +SDNP NA+F+P+P+ +E S  QVVGIT  G+YIE   G NF  
Sbjct: 300  AHNISLVLDLPMVGQRMSDNPMNAIFIPSPLPVEVSLIQVVGITHSGTYIEAASGENFAA 359

Query: 186  TSNISDYQGFTYEM----------------------GGFVFEKINGPLSMGSLKLANLDP 299
            +    D+  F+ +                       GGF+ EKI GP+S G L+L + +P
Sbjct: 360  SGPQRDFGMFSPKQRTPEAIAKAIDSMSKLDETAFRGGFILEKIMGPISTGHLELQSRNP 419

Query: 300  ADNPNITFNYFKEPEDLEKCVRGVQTILTAIDSETFSNYKYSNMTIQDILDLNMKLPYNL 479
             DNP++TFNYFKEPEDL++CV G+Q I   I+S+ FS +KY  +++  ++++ +  P NL
Sbjct: 420  NDNPSVTFNYFKEPEDLQRCVNGMQIIEKIIESKAFSQFKYDYLSVPALINMTLNFPVNL 479

Query: 480  IP-HANTSSSLEEYCTETKRSIWHYHGGCHIGEVVDDEYKVLGVDALRVIDGSTLLNSPG 656
            +P H N S+SLE++C +T  +IWHYHGGC +G VVD +YKVLGVDALRVIDGST   SPG
Sbjct: 480  VPRHDNASTSLEQFCKDTVMTIWHYHGGCQVGSVVDHDYKVLGVDALRVIDGSTFNASPG 539

Query: 657  TNPQAS 674
            TNPQA+
Sbjct: 540  TNPQAT 545



 Score = 22.7 bits (47), Expect(2) = 9e-64
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 791 RYMGVTMLAERLA 829
           RYMG+ +L+ERLA
Sbjct: 551 RYMGLRILSERLA 563


>ref|XP_003611165.1| Choline dehydrogenase [Medicago truncatula]
            gi|355512500|gb|AES94123.1| Choline dehydrogenase
            [Medicago truncatula]
          Length = 580

 Score =  246 bits (628), Expect(2) = 3e-63
 Identities = 127/254 (50%), Positives = 165/254 (64%), Gaps = 33/254 (12%)
 Frame = +3

Query: 12   NISVVLEQPLVGNNVSDNPQNAVFVPAPVAIERSTTQVVGITEFGSYIEEGGGVNFLFTS 191
            NISVVL+QPLVG  +SDNP NAV+VP+P  +E S   VVGIT FGSYIE   G    FTS
Sbjct: 306  NISVVLDQPLVGQGMSDNPMNAVYVPSPSPVEVSLISVVGITNFGSYIEAVSGA--AFTS 363

Query: 192  NISDYQGFTYEMG--------------------------------GFVFEKINGPLSMGS 275
            N S++  FT ++G                                GF+ EK+ GP+S G 
Sbjct: 364  NGSEFTMFTPKIGQFSKLPPKQMILQAIAKAIGRIESLDQEALRGGFILEKVIGPISTGH 423

Query: 276  LKLANLDPADNPNITFNYFKEPEDLEKCVRGVQTILTAIDSETFSNYKYSNMTIQDILDL 455
            L+L N DP DNP +TFNYF++P DLE+C++G+ TI   IDS  F+ ++Y+N++   +L++
Sbjct: 424  LELRNTDPNDNPLVTFNYFQDPRDLERCIQGMGTIEKIIDSNAFAPFRYNNISFSMLLNM 483

Query: 456  NMKLPYNLIP-HANTSSSLEEYCTETKRSIWHYHGGCHIGEVVDDEYKVLGVDALRVIDG 632
                  NL+P H NTS SLE++C +T  +IWHYHGGC +G VVD++YKVLGVDALRVIDG
Sbjct: 484  IANAQVNLLPKHTNTSMSLEQFCRDTVMTIWHYHGGCQVGRVVDNDYKVLGVDALRVIDG 543

Query: 633  STLLNSPGTNPQAS 674
            ST   SPGTNPQA+
Sbjct: 544  STFNYSPGTNPQAT 557



 Score = 23.1 bits (48), Expect(2) = 3e-63
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 791 RYMGVTMLAERLA 829
           RYMGV +L ERLA
Sbjct: 563 RYMGVRILRERLA 575


>ref|XP_003611166.1| Choline dehydrogenase [Medicago truncatula]
            gi|355512501|gb|AES94124.1| Choline dehydrogenase
            [Medicago truncatula]
          Length = 580

 Score =  245 bits (626), Expect = 1e-62
 Identities = 125/254 (49%), Positives = 162/254 (63%), Gaps = 33/254 (12%)
 Frame = +3

Query: 12   NISVVLEQPLVGNNVSDNPQNAVFVPAPVAIERSTTQVVGITEFGSYIEEGGGVNFLFTS 191
            NISVVL QP VG  +SDNP N+V+VP+P  +E S   VVGIT FGSYIE   G  F  T 
Sbjct: 306  NISVVLHQPFVGQGMSDNPMNSVYVPSPSPVEVSLISVVGITSFGSYIEAASGATF--TG 363

Query: 192  NISDYQGFTYEMG--------------------------------GFVFEKINGPLSMGS 275
            +  D+  F+ E+G                                GF+ EKI GP+S G 
Sbjct: 364  SQRDFGMFSPEIGQFSKLPPKQRTPEAIAKAIERMESLDQEAFRGGFILEKILGPISTGH 423

Query: 276  LKLANLDPADNPNITFNYFKEPEDLEKCVRGVQTILTAIDSETFSNYKYSNMTIQDILDL 455
            L+L N DP +NP +TFNYF++P DLE+C++G+ TI   IDS+ FS +KY+NM++  +L++
Sbjct: 424  LELRNTDPNENPLVTFNYFQDPRDLERCIQGMNTIEKIIDSKAFSPFKYTNMSVSMLLNM 483

Query: 456  NMKLPYNLIP-HANTSSSLEEYCTETKRSIWHYHGGCHIGEVVDDEYKVLGVDALRVIDG 632
                P NL+P H NTS SLE++C +T  +IWHYHGGC +G VVD +YKV GV ALRVIDG
Sbjct: 484  TANSPVNLLPKHTNTSMSLEQFCRDTVMTIWHYHGGCQVGRVVDSDYKVAGVHALRVIDG 543

Query: 633  STLLNSPGTNPQAS 674
            ST  +SPGTNPQA+
Sbjct: 544  STFNHSPGTNPQAT 557


>ref|XP_002282510.2| PREDICTED: protein HOTHEAD isoform 1 [Vitis vinifera]
            gi|297742610|emb|CBI34759.3| unnamed protein product
            [Vitis vinifera]
          Length = 578

 Score =  244 bits (624), Expect(2) = 1e-62
 Identities = 121/256 (47%), Positives = 166/256 (64%), Gaps = 33/256 (12%)
 Frame = +3

Query: 6    ALNISVVLEQPLVGNNVSDNPQNAVFVPAPVAIERSTTQVVGITEFGSYIEEGGGVNFLF 185
            A NIS+VL+ P+VG  +SDNP NA+F+P+P+ +E S  QVVGIT  G+YIE   G NF  
Sbjct: 300  AHNISLVLDLPMVGQRMSDNPMNAIFIPSPLPVEVSLIQVVGITHSGTYIEAASGENFAA 359

Query: 186  TSNISDYQGFTYEMG--------------------------------GFVFEKINGPLSM 269
            +    D+  F+ ++G                                GF+ EKI GP+S 
Sbjct: 360  SGPQRDFGMFSPKIGQLATVPPKQRTPEAIAKAIDSMSKLDETAFRGGFILEKIMGPIST 419

Query: 270  GSLKLANLDPADNPNITFNYFKEPEDLEKCVRGVQTILTAIDSETFSNYKYSNMTIQDIL 449
            G L+L + +P DNP++TFNYFKEPEDL++CV G+Q I   I+S+ FS +KY  +++  ++
Sbjct: 420  GHLELQSRNPNDNPSVTFNYFKEPEDLQRCVNGMQIIEKIIESKAFSQFKYDYLSVPALI 479

Query: 450  DLNMKLPYNLIP-HANTSSSLEEYCTETKRSIWHYHGGCHIGEVVDDEYKVLGVDALRVI 626
            ++ +  P NL+P H N S+SLE++C +T  +IWHYHGGC +G VVD +YKVLGVDALRVI
Sbjct: 480  NMTLNFPVNLVPRHDNASTSLEQFCKDTVMTIWHYHGGCQVGSVVDHDYKVLGVDALRVI 539

Query: 627  DGSTLLNSPGTNPQAS 674
            DGST   SPGTNPQA+
Sbjct: 540  DGSTFNASPGTNPQAT 555



 Score = 22.7 bits (47), Expect(2) = 1e-62
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 791 RYMGVTMLAERLA 829
           RYMG+ +L+ERLA
Sbjct: 561 RYMGLRILSERLA 573


>gb|AFK39106.1| unknown [Medicago truncatula]
          Length = 412

 Score =  244 bits (622), Expect(2) = 1e-62
 Identities = 126/254 (49%), Positives = 164/254 (64%), Gaps = 33/254 (12%)
 Frame = +3

Query: 12  NISVVLEQPLVGNNVSDNPQNAVFVPAPVAIERSTTQVVGITEFGSYIEEGGGVNFLFTS 191
           NISVVL+QPLVG  +SDNP NAV+VP+P  +E S   VVGIT FGSYIE   G    FTS
Sbjct: 138 NISVVLDQPLVGQGMSDNPMNAVYVPSPSPVEVSLISVVGITNFGSYIEAVSGA--AFTS 195

Query: 192 NISDYQGFTYEMG--------------------------------GFVFEKINGPLSMGS 275
           N S++  FT ++G                                GF+ EK+ GP+S G 
Sbjct: 196 NGSEFTMFTPKIGQFSKLPPKQMILQAIAKAIGRIESLDQEALRGGFILEKVIGPISTGH 255

Query: 276 LKLANLDPADNPNITFNYFKEPEDLEKCVRGVQTILTAIDSETFSNYKYSNMTIQDILDL 455
           L+L N DP DNP +TFNYF++P DLE+C++G+ TI   IDS  F+ ++Y+N++   +L++
Sbjct: 256 LELRNTDPNDNPLVTFNYFQDPRDLERCIQGMGTIEKIIDSNAFAPFRYNNISFSMLLNM 315

Query: 456 NMKLPYNLIP-HANTSSSLEEYCTETKRSIWHYHGGCHIGEVVDDEYKVLGVDALRVIDG 632
                 NL+P H NTS SLE++C +T  +IWHYHGGC +G VVD++YKVLGVDALRVIDG
Sbjct: 316 IANAQVNLLPKHTNTSMSLEQFCRDTVMTIWHYHGGCQVGRVVDNDYKVLGVDALRVIDG 375

Query: 633 STLLNSPGTNPQAS 674
           ST    PGTNPQA+
Sbjct: 376 STFNYFPGTNPQAT 389



 Score = 23.1 bits (48), Expect(2) = 1e-62
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 791 RYMGVTMLAERLA 829
           RYMGV +L ERLA
Sbjct: 395 RYMGVRILRERLA 407


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