BLASTX nr result

ID: Atractylodes22_contig00004150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004150
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-contain...   144   8e-32
emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]   141   4e-31
ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyr...   120   7e-25
ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsi...   115   4e-23
ref|XP_002313451.1| methyl binding domain protein [Populus trich...   107   8e-21

>ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-containing protein 7-like [Vitis
            vinifera] gi|297746130|emb|CBI16186.3| unnamed protein
            product [Vitis vinifera]
          Length = 212

 Score =  144 bits (362), Expect = 8e-32
 Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 3/263 (1%)
 Frame = -2

Query: 1173 FTLPKDWSVKKVPRKVG---GLTDKYYLDPETGRQFRSLKEVERYITEGVTPTKYRAKRL 1003
            F LP+DW V+KV R  G   GL DKYY +PETGRQFRSLK +++Y+TE +  T       
Sbjct: 10   FKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKMENTPK----- 64

Query: 1002 NHRHHEKNSGSQDTVVAGVKNPDSQDMIVAGGEMLDLEEDKDNQCQLVNVSTTNISPTSS 823
                              +  PD ++           EE++ +Q   + +   N+     
Sbjct: 65   ------------------ILGPDKEE-----------EEEQPHQKMAMQIMDPNL----- 90

Query: 822  FKLPDGWVVEEVPRVSGGYTDKYYYEPGTGNKFRSMVAVQKHLTELEENSPLSVVLEELR 643
             +LPD WV ++    S G   KYYYEPGTG +FRS+ +VQ+HL E  + +          
Sbjct: 91   -ELPDNWVFQKRSS-SSGQIHKYYYEPGTGRQFRSLKSVQRHLIEANDCT-------HKP 141

Query: 642  ENNLPLSKAFKLSSRIKNHGSYNSFKKSISRKEKTTSFASPPSKINWVIAGAGEDAWDAF 463
              N   SK    S+++K                 T+ F  PP K+NWV+ G G D W  +
Sbjct: 142  SQNSDASKKNNSSTKVKT---------------STSHFIKPPKKVNWVLTGPGGDVWSPY 186

Query: 462  VDDTLVPDSVKQQWGKTFTMAIN 394
            ++ + VP+S+KQ W K F + +N
Sbjct: 187  INASAVPESIKQTWAKIFMLHVN 209


>emb|CAN67324.1| hypothetical protein VITISV_012829 [Vitis vinifera]
          Length = 212

 Score =  141 bits (356), Expect = 4e-31
 Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 3/263 (1%)
 Frame = -2

Query: 1173 FTLPKDWSVKKVPRKVG---GLTDKYYLDPETGRQFRSLKEVERYITEGVTPTKYRAKRL 1003
            F LP+DW V+KV R  G   GL DKYY +PETGRQFRSLK +++Y+TE +  T       
Sbjct: 10   FKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKMENTPK----- 64

Query: 1002 NHRHHEKNSGSQDTVVAGVKNPDSQDMIVAGGEMLDLEEDKDNQCQLVNVSTTNISPTSS 823
                              +  PD ++           EE++ +Q   + +   N+     
Sbjct: 65   ------------------ILGPDKEE-----------EEEQPHQKMAMQIMDPNL----- 90

Query: 822  FKLPDGWVVEEVPRVSGGYTDKYYYEPGTGNKFRSMVAVQKHLTELEENSPLSVVLEELR 643
             +LPD WV ++    S G   KYYYEPG G +FRS+ +VQ+HL E  + +          
Sbjct: 91   -ELPDNWVFQKRSS-SSGQIHKYYYEPGXGRQFRSLKSVQRHLIEANDCT-------HKP 141

Query: 642  ENNLPLSKAFKLSSRIKNHGSYNSFKKSISRKEKTTSFASPPSKINWVIAGAGEDAWDAF 463
              N   SK    S+++K                 T+ F  PP K+NWV+ G G D W  +
Sbjct: 142  SQNSDASKKNNSSTKVKT---------------STSHFIKPPKKVNWVLTGPGGDVWSPY 186

Query: 462  VDDTLVPDSVKQQWGKTFTMAIN 394
            ++ + VP+S+KQ W K F + +N
Sbjct: 187  INASAVPESIKQTWAKIFMLHVN 209


>ref|XP_002866351.1| methyl-CpG-binding domain 7 [Arabidopsis lyrata subsp. lyrata]
            gi|297312186|gb|EFH42610.1| methyl-CpG-binding domain 7
            [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  120 bits (302), Expect = 7e-25
 Identities = 83/262 (31%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
 Frame = -2

Query: 1173 FTLPKDWSVKKVPRKVGGLTDKYYLDPETGRQFRSLKEVERYITEGVTPTKYRAKRL-NH 997
            F LP+ WSV++VPRK     DKYY++ +TG++FRSL  VERY+ E    T  +   L N 
Sbjct: 116  FRLPRGWSVEEVPRKNSHYIDKYYVERKTGKRFRSLVSVERYLRESGNRTDQQLILLQNR 175

Query: 996  RHHEKNSGSQDTVVAGVKNPDSQDMIVAGGEMLDLEEDKDNQCQLVNVSTTNISPTSSFK 817
            R H K+                                                    F 
Sbjct: 176  RGHSKD----------------------------------------------------FS 183

Query: 816  LPDGWVVEEVPRVSGGYTDKYYYEPGTGNKFRSMVAVQKHLTELEENSPLSVVLEELREN 637
            LPDGW+VEE PR +  + D+ Y EPGTGNKFRSM AV+++L +  ENS + +V  E    
Sbjct: 184  LPDGWIVEEKPRRNSSHIDRSYIEPGTGNKFRSMAAVERYL-QAVENSTVDMVHSE---- 238

Query: 636  NLPLSKAFKLSSRIKNHGSYNSFKKSISRKEKTTSFASPPSKINWVIAGAGEDAWDAFVD 457
                    +L+  +   G         +R +      +PP K+ WV+ G+G D + A V 
Sbjct: 239  --------RLALLMNRSG---------TRFQDEVIDPNPPKKVKWVLTGSGGDMFTANVS 281

Query: 456  DTLVPDSVKQQWGKTFTMAINN 391
             + V   VKQ W + F   I +
Sbjct: 282  GSDVSSLVKQTWSEAFVSLIQD 303


>ref|NP_200788.1| methyl-CPG-binding domain 7 protein [Arabidopsis thaliana]
            gi|75171028|sp|Q9FJF4.1|MBD7_ARATH RecName:
            Full=Methyl-CpG-binding domain-containing protein 7;
            Short=AtMBD7; Short=MBD07; AltName:
            Full=Methyl-CpG-binding protein MBD7
            gi|9757900|dbj|BAB08347.1| unnamed protein product
            [Arabidopsis thaliana] gi|50198785|gb|AAT70426.1|
            At5g59800 [Arabidopsis thaliana]
            gi|53828603|gb|AAU94411.1| At5g59800 [Arabidopsis
            thaliana] gi|332009852|gb|AED97235.1| methyl-CPG-binding
            domain 7 protein [Arabidopsis thaliana]
          Length = 306

 Score =  115 bits (287), Expect = 4e-23
 Identities = 80/261 (30%), Positives = 115/261 (44%)
 Frame = -2

Query: 1173 FTLPKDWSVKKVPRKVGGLTDKYYLDPETGRQFRSLKEVERYITEGVTPTKYRAKRLNHR 994
            F LP+ WSV++VPRK     DKYY++ +TG++FRSL  VERY+ E               
Sbjct: 114  FRLPRGWSVEEVPRKNSHYIDKYYVERKTGKRFRSLVSVERYLRES-------------- 159

Query: 993  HHEKNSGSQDTVVAGVKNPDSQDMIVAGGEMLDLEEDKDNQCQLVNVSTTNISPTSSFKL 814
               +NS  Q   V   +   S+D                                  F+L
Sbjct: 160  ---RNSIEQQLRVLQNRRGHSKD----------------------------------FRL 182

Query: 813  PDGWVVEEVPRVSGGYTDKYYYEPGTGNKFRSMVAVQKHLTELEENSPLSVVLEELRENN 634
            PDGW+VEE PR S  + D+ Y EPGTGNKFRSM AV+++L  +   +  SV +  +    
Sbjct: 183  PDGWIVEEKPRRSSSHIDRSYIEPGTGNKFRSMAAVERYLISVGNITLDSVSM--VHSER 240

Query: 633  LPLSKAFKLSSRIKNHGSYNSFKKSISRKEKTTSFASPPSKINWVIAGAGEDAWDAFVDD 454
            LPL                    ++  R +      +PP K+ WV+ G+G + + A V  
Sbjct: 241  LPL-----------------LMNRNGIRFQSEVIDPNPPKKVKWVLTGSGGNMFTANVRG 283

Query: 453  TLVPDSVKQQWGKTFTMAINN 391
            + V   VK  W + F   I +
Sbjct: 284  SNVSSLVKHTWSEAFVSLIED 304


>ref|XP_002313451.1| methyl binding domain protein [Populus trichocarpa]
           gi|222849859|gb|EEE87406.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 236

 Score =  107 bits (267), Expect = 8e-21
 Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 6/150 (4%)
 Frame = -2

Query: 828 SSFKLPDGWVVEEVPRVS---GGYTDKYYYEPGTGNKFRSMVAVQKHLTELEENSPLSVV 658
           S F LP+GW+VE+ PR +    G  DK+Y+EP TG +FRS+ +V+K+LTE +E+      
Sbjct: 97  SLFDLPNGWIVEKKPRKNMECAGIIDKHYFEPETGKRFRSLRSVEKYLTEGKEH------ 150

Query: 657 LEELRENNLPLSKAFKLSSRIKNHGSYNSFKKSISRKEKTTSFASP---PSKINWVIAGA 487
                   +   +A K         S +S K+ +SRK+  TS   P   P+KI WV++G 
Sbjct: 151 --------IATLEALKAGDNFIPSKSSSSQKEHVSRKKVETSMLDPSSIPAKIKWVLSGP 202

Query: 486 GEDAWDAFVDDTLVPDSVKQQWGKTFTMAI 397
           G   W+ F+DD+LVP+ +KQ+W +TF  +I
Sbjct: 203 GGIVWNPFMDDSLVPEFIKQKWSETFVFSI 232



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
 Frame = -2

Query: 1221 PGSDK---VSPTNMLVTPKFTLPKDWSVKKVPRK---VGGLTDKYYLDPETGRQFRSLKE 1060
            PG+ K   + P        F LP  W V+K PRK     G+ DK+Y +PETG++FRSL+ 
Sbjct: 80   PGNKKKIQIDPYIFKSRSLFDLPNGWIVEKKPRKNMECAGIIDKHYFEPETGKRFRSLRS 139

Query: 1059 VERYITEG 1036
            VE+Y+TEG
Sbjct: 140  VEKYLTEG 147


Top