BLASTX nr result

ID: Atractylodes22_contig00004144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004144
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ73105.1| resistance protein RGC2 [Lactuca sativa]                75   7e-12
gb|AAQ73098.1| resistance protein RGC2 [Lactuca sativa]                75   7e-12
gb|AAP45716.1| RGC2-like protein [Cichorium endivia]                   75   7e-12
gb|AAP44461.1| resistance protein RGC2K [Lactuca perennis]             74   1e-11
gb|AAQ73149.1| resistance protein RGC2 [Lactuca sativa]                74   1e-11

>gb|AAQ73105.1| resistance protein RGC2 [Lactuca sativa]
          Length = 576

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
 Frame = +2

Query: 11  VIPSHAVGQLPKLEELEISGCRSMREIFEIDNDVAGHNTNVGEGSGDTMT--IPRLTNMT 184
           VIP +A GQ+ K++ L I  C SM+E+FE      G N N+G+   D     IP ++ + 
Sbjct: 3   VIPCYAAGQMQKVQVLNIYRCNSMKELFETQ----GMNNNIGDSGCDEGNGCIPAISRLN 58

Query: 185 NLLELSNLKKVYVTDCCLLENIFTSSTLESLKKLE 289
           N++ L NLK + + DC  LE++FT S LESLK+LE
Sbjct: 59  NVIMLPNLKILKIEDCGNLEHVFTFSALESLKQLE 93


>gb|AAQ73098.1| resistance protein RGC2 [Lactuca sativa]
          Length = 419

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
 Frame = +2

Query: 11  VIPSHAVGQLPKLEELEISGCRSMREIFEIDNDVAGHNTNVG--EGSGDTMTIPRLTNMT 184
           VIP +AVGQ+ KL+ L I  C  M+E+FE        N+N G  +G+  T+ IPR   + 
Sbjct: 5   VIPCYAVGQMQKLQVLNIIDCDGMKEVFETQGMNNNTNSNGGYEDGNDGTLAIPR---VN 61

Query: 185 NLLELSNLKKVYVTDCCLLENIFTSSTLESLKKLE 289
           N++ L NLK + + +C LLE+IF  STLESLK LE
Sbjct: 62  NVIMLPNLKILEIMNCNLLEHIFKFSTLESLKHLE 96


>gb|AAP45716.1| RGC2-like protein [Cichorium endivia]
          Length = 407

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/88 (46%), Positives = 58/88 (65%)
 Frame = +2

Query: 26  AVGQLPKLEELEISGCRSMREIFEIDNDVAGHNTNVGEGSGDTMTIPRLTNMTNLLELSN 205
           A GQ+ KL+ L IS C  M+E+FE D  +  + +   EG+G    IPRL N+   + L N
Sbjct: 1   AAGQMQKLQALYISNCNRMKEVFETDQAMNKNESGCDEGNGG---IPRLNNV---IMLPN 54

Query: 206 LKKVYVTDCCLLENIFTSSTLESLKKLE 289
           LK +Y++DC LLE+IFT S LESL++L+
Sbjct: 55  LKILYISDCGLLEHIFTFSALESLRQLQ 82


>gb|AAP44461.1| resistance protein RGC2K [Lactuca perennis]
          Length = 577

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 41/93 (44%), Positives = 58/93 (62%)
 Frame = +2

Query: 11  VIPSHAVGQLPKLEELEISGCRSMREIFEIDNDVAGHNTNVGEGSGDTMTIPRLTNMTNL 190
           VIP +AVGQ+ K++ L I  C SM+E+FE        ++   EG+G    IPRL    N+
Sbjct: 5   VIPCYAVGQMQKVQVLNIYRCNSMKELFETQGMNNNGDSGCDEGNGGIPAIPRL---NNI 61

Query: 191 LELSNLKKVYVTDCCLLENIFTSSTLESLKKLE 289
           + L NLK + + DC  LE++FT S LESL++LE
Sbjct: 62  IMLPNLKILKIEDCGHLEHVFTFSALESLRQLE 94


>gb|AAQ73149.1| resistance protein RGC2 [Lactuca sativa]
          Length = 578

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
 Frame = +2

Query: 11  VIPSHAVGQLPKLEELEISGCRSMREIFEIDNDVAGHNTNVG-----EGSGDTMTIPRLT 175
           VIP +A GQ+ K++ L I  C SM+E+FE      G N N+G     EG+G    IPRL 
Sbjct: 5   VIPCYAAGQMQKVQVLNIYRCNSMKELFETQ----GMNNNIGDSGCDEGNGCIPAIPRLN 60

Query: 176 NMTNLLELSNLKKVYVTDCCLLENIFTSSTLESLKKLE 289
           N+   + L NLK + + DC  LE++FT S LESLK+LE
Sbjct: 61  NV---IMLPNLKILKIEDCGHLEHVFTFSALESLKQLE 95


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