BLASTX nr result
ID: Atractylodes22_contig00004117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00004117
(1942 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi... 621 e-175
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2... 592 e-166
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,... 570 e-160
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi... 566 e-159
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi... 558 e-156
>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Vitis vinifera]
gi|297741486|emb|CBI32618.3| unnamed protein product
[Vitis vinifera]
Length = 842
Score = 621 bits (1601), Expect = e-175
Identities = 314/466 (67%), Positives = 368/466 (78%), Gaps = 17/466 (3%)
Frame = -2
Query: 1899 LHHELSAQKINPNLYVFNSLMNVNARDLSYTMCIYKHMQILGVAPDMASYNILLKSCCLA 1720
++ EL AQKI PN+YVFNSLMNVN DLSYT +YK+MQ LGV DMASYNILLK+CC+A
Sbjct: 267 IYEELLAQKITPNIYVFNSLMNVNVHDLSYTFNVYKNMQNLGVTADMASYNILLKACCVA 326
Query: 1719 ARVDLAQEIYREVEYLESRGSLKLDVFTYSTMIKVFADARMWQMALGMKEKMLEAGVTPN 1540
RVDLAQEIYREV+ LES G LKLDVFTYST+IKVFADA++WQMAL +KE ML AGV PN
Sbjct: 327 GRVDLAQEIYREVQNLESNGMLKLDVFTYSTIIKVFADAKLWQMALKIKEDMLSAGVIPN 386
Query: 1539 TVTWSSLISACAKAGLVDQAFVLFEEMLLANCMPNSQCCNVLLYACVKAFQYDRAFRLFQ 1360
TVTWS+LIS+CA AG+ +QA LF+EMLLA C PNSQC N+LL+ACV+A QYDRAFRLFQ
Sbjct: 387 TVTWSALISSCANAGITEQAIQLFKEMLLAGCEPNSQCYNILLHACVEACQYDRAFRLFQ 446
Query: 1359 SWKRNSFQMVIG--------------DHCSNAYGNIANRKNLSQGGSQVPFKPTTSTYNV 1222
SWK + FQ + G +C + N + + PF PTT+TYN+
Sbjct: 447 SWKDSRFQEISGGTGNGNTVGVELKHQNCITSMPNCLSNSHHLSFSKSFPFTPTTTTYNI 506
Query: 1221 LMKACGTDHHRAKALMDEMTRFGLCPNHISWSTLIGVYGGSGDVKSAVQVLKTMRESGVQ 1042
LMKACGTD++RAKALMDEM GL PNHISWS LI + GG+G++ AV++LKTMRE+G++
Sbjct: 507 LMKACGTDYYRAKALMDEMKTAGLSPNHISWSILIDICGGTGNIVGAVRILKTMREAGIK 566
Query: 1041 PDVVAYTAAIKVCVKQRELNSAFSLFAEMKKYQIQPNMVTYNTLLRARTRYGSLEEVQQC 862
PDVVAYT AIK CV+ + L AFSLFAEMK+YQIQPN+VTYNTLLRAR+RYGSL EVQQC
Sbjct: 567 PDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVTYNTLLRARSRYGSLHEVQQC 626
Query: 861 LSIYQDMRKAGFKPNDYYLKELIEEWCEGIIQDNRWPQGHLNSSNKKDLGGPHSLLLEKV 682
L+IYQ MRKAG+K NDYYLKELIEEWCEG+IQDN Q +S N+ D G P SLLLEKV
Sbjct: 627 LAIYQHMRKAGYKSNDYYLKELIEEWCEGVIQDNNLNQSKFSSVNRADWGRPQSLLLEKV 686
Query: 681 ASHLQKGNAETKSIAVDLRGLTKVEARIVVLAVLRMIKENY---HP 553
A+HLQK AE S+A+DL+GLT+VEARIVVLAVLRMIKENY HP
Sbjct: 687 AAHLQKSVAE--SLAIDLQGLTQVEARIVVLAVLRMIKENYILGHP 730
Score = 68.6 bits (166), Expect = 6e-09
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Frame = -2
Query: 1635 YSTMIKVFADARMWQMALGMKEKMLEAGVTPNTVTWSSLISACAKAGLVDQAFVLFEEML 1456
+ T+I F R AL E + + PN + ++I C ++ ++EE+L
Sbjct: 213 FCTIIHEFGKKRDLGSALTAFEASKQKLIGPNMYCYRTMIDVCGLCSHYQKSRYIYEELL 272
Query: 1455 LANCMPNSQCCNVLLYACVKAFQYDRAFRLFQSWKR-------NSFQMVIGDHCSNAYGN 1297
PN N L+ V Y F ++++ + S+ +++ C +
Sbjct: 273 AQKITPNIYVFNSLMNVNVHDLSY--TFNVYKNMQNLGVTADMASYNILLKACCVAGRVD 330
Query: 1296 IANR-----KNLSQGGSQVPFKPTTSTYNVLMK--ACGTDHHRAKALMDEMTRFGLCPNH 1138
+A +NL G K TY+ ++K A A + ++M G+ PN
Sbjct: 331 LAQEIYREVQNLESNGM---LKLDVFTYSTIIKVFADAKLWQMALKIKEDMLSAGVIPNT 387
Query: 1137 ISWSTLIGVYGGSGDVKSAVQVLKTMRESGVQPDVVAYTAAIKVCVKQRELNSAFSLFAE 958
++WS LI +G + A+Q+ K M +G +P+ Y + CV+ + + AF LF
Sbjct: 388 VTWSALISSCANAGITEQAIQLFKEMLLAGCEPNSQCYNILLHACVEACQYDRAFRLFQS 447
Query: 957 MKKYQIQ 937
K + Q
Sbjct: 448 WKDSRFQ 454
>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
predicted protein [Populus trichocarpa]
Length = 828
Score = 592 bits (1525), Expect = e-166
Identities = 306/469 (65%), Positives = 365/469 (77%), Gaps = 15/469 (3%)
Frame = -2
Query: 1899 LHHELSAQKINPNLYVFNSLMNVNARDLSYTMCIYKHMQILGVAPDMASYNILLKSCCLA 1720
++ +L +K+ PN+YVFNSLMNVNA DL YT ++K+MQ LGV D+ASYNILLK+CC+A
Sbjct: 279 IYEDLINRKVIPNVYVFNSLMNVNAHDLGYTFSVFKNMQNLGVTADVASYNILLKACCIA 338
Query: 1719 ARVDLAQEIYREVEYLESRGSLKLDVFTYSTMIKVFADARMWQMALGMKEKMLEAGVTPN 1540
RVDLA++IYREV+ LES LKLDVFTY ++K+FADA+MWQMAL +KE ML +GVTPN
Sbjct: 339 GRVDLAKDIYREVKQLESAEVLKLDVFTYCMIVKIFADAKMWQMALKIKEDMLSSGVTPN 398
Query: 1539 TVTWSSLISACAKAGLVDQAFVLFEEMLLANCMPNSQCCNVLLYACVKAFQYDRAFRLFQ 1360
WSSLISACA AGLV+QA LFEEMLL+ C PNSQCCN+LL+ACV+A QYDRAFRLFQ
Sbjct: 399 MHIWSSLISACANAGLVEQAIQLFEEMLLSGCKPNSQCCNILLHACVQACQYDRAFRLFQ 458
Query: 1359 SWKRNSFQMVI-GDH-------------CSNAYGNIANRKNLSQGGSQVPFKPTTSTYNV 1222
WK + Q V GDH C N + N +L+ + PF PT +TY++
Sbjct: 459 CWKGSEAQEVFHGDHSGNADEIEHAQKHCPNMTTIVPNSHHLNFI-KKFPFTPTPATYHM 517
Query: 1221 LMKACGTDHHRAKALMDEMTRFGLCPNHISWSTLIGVYGGSGDVKSAVQVLKTMRESGVQ 1042
LMKACG+D+HRAKALMDEM G+ PNHISWS LI + G SG+V AVQ+LK MR +GV+
Sbjct: 518 LMKACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRMAGVE 577
Query: 1041 PDVVAYTAAIKVCVKQRELNSAFSLFAEMKKYQIQPNMVTYNTLLRARTRYGSLEEVQQC 862
PDVVAYT AIKVCV+ + L AFSLFAEMK+ QI PN+VTYNTLLRARTRYGSL EVQQC
Sbjct: 578 PDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVTYNTLLRARTRYGSLREVQQC 637
Query: 861 LSIYQDMRKAGFKPNDYYLKELIEEWCEGIIQDNRWPQGHLNSSNKKDLGGPHSLLLEKV 682
L+IYQDMRKAG+K NDYYLK+LIEEWCEG+IQDN QG S + DLG P SLLLEKV
Sbjct: 638 LAIYQDMRKAGYKSNDYYLKQLIEEWCEGVIQDNNQIQGGFASCKRTDLGRPRSLLLEKV 697
Query: 681 ASHLQKGNAETKSIAVDLRGLTKVEARIVVLAVLRMIKENYHPG-NVKE 538
A+HLQ N ++++A+DL+GLTKVEARIVVLAVLRMIKENY G +VKE
Sbjct: 698 AAHLQ--NNISENLAIDLQGLTKVEARIVVLAVLRMIKENYTLGYSVKE 744
>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 786
Score = 570 bits (1469), Expect = e-160
Identities = 290/469 (61%), Positives = 356/469 (75%), Gaps = 17/469 (3%)
Frame = -2
Query: 1899 LHHELSAQKINPNLYVFNSLMNVNARDLSYTMCIYKHMQILGVAPDMASYNILLKSCCLA 1720
+ ++ +QK+ PN++VFNSLMNVNA DL YT+ +YK MQ LGV DM SYNILLKSC LA
Sbjct: 211 IFEDIVSQKVIPNIFVFNSLMNVNAHDLGYTLHVYKKMQNLGVTADMTSYNILLKSCSLA 270
Query: 1719 ARVDLAQEIYREVEYLESRGSLKLDVFTYSTMIKVFADARMWQMALGMKEKMLEAGVTPN 1540
+VDLAQ+IYRE + LE G LKLD FTY T+IK+FADA++WQ+AL +KE ML +GVTPN
Sbjct: 271 GKVDLAQDIYREAKQLELAGLLKLDDFTYCTIIKIFADAKLWQLALKIKEDMLSSGVTPN 330
Query: 1539 TVTWSSLISACAKAGLVDQAFVLFEEMLLANCMPNSQCCNVLLYACVKAFQYDRAFRLFQ 1360
T TWSSLISA A AGLVDQA LFEEMLLA C+PNS CCN+LL+ACV+A QYDRAFRLF
Sbjct: 331 TFTWSSLISASANAGLVDQAIKLFEEMLLAGCVPNSHCCNILLHACVEACQYDRAFRLFN 390
Query: 1359 SWKRNSFQMVIG-------DHCSNAYG----------NIANRKNLSQGGSQVPFKPTTST 1231
+WK + Q D S+A N+A+ + PF P+++T
Sbjct: 391 AWKGSEIQNTFTTDYNCPVDDISSAMHACEDYIITVPNLASNSLHLSFLKKFPFTPSSAT 450
Query: 1230 YNVLMKACGTDHHRAKALMDEMTRFGLCPNHISWSTLIGVYGGSGDVKSAVQVLKTMRES 1051
YN LMKACG+D++RAKALMDEM GL PNHISWS LI + G SG+++ A+Q+LK MR +
Sbjct: 451 YNTLMKACGSDYNRAKALMDEMQAVGLSPNHISWSILIDICGSSGNMEGAIQILKNMRMA 510
Query: 1050 GVQPDVVAYTAAIKVCVKQRELNSAFSLFAEMKKYQIQPNMVTYNTLLRARTRYGSLEEV 871
G++PDV+AYT AIKV V+ + L AFSLFAEMK+YQ++PN+VTY+TLLRARTRYGSL+EV
Sbjct: 511 GIEPDVIAYTTAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVTYDTLLRARTRYGSLKEV 570
Query: 870 QQCLSIYQDMRKAGFKPNDYYLKELIEEWCEGIIQDNRWPQGHLNSSNKKDLGGPHSLLL 691
QQCL+IYQDMRKAG+K ND YLK+LIEEWCEG+IQDN Q + + G PHSLLL
Sbjct: 571 QQCLAIYQDMRKAGYKSNDNYLKQLIEEWCEGVIQDNDQCQDDFKPCKRAEFGRPHSLLL 630
Query: 690 EKVASHLQKGNAETKSIAVDLRGLTKVEARIVVLAVLRMIKENYHPGNV 544
EKVA+HL AE S++VDL+GLTKVEARIVVLAVLRM+KENY G++
Sbjct: 631 EKVAAHLHHNVAE--SLSVDLQGLTKVEARIVVLAVLRMVKENYIQGHL 677
>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Glycine max]
Length = 811
Score = 566 bits (1458), Expect = e-159
Identities = 280/462 (60%), Positives = 357/462 (77%), Gaps = 11/462 (2%)
Frame = -2
Query: 1899 LHHELSAQKINPNLYVFNSLMNVNARDLSYTMCIYKHMQILGVAPDMASYNILLKSCCLA 1720
++ +L QKI PN+YVFNSLMNVN+ DLSYT+ +Y++MQ LG+ PDM SYNILLK+CC+A
Sbjct: 249 IYEDLLNQKITPNIYVFNSLMNVNSHDLSYTLNLYQNMQNLGLKPDMTSYNILLKACCVA 308
Query: 1719 ARVDLAQEIYREVEYLESRGSLKLDVFTYSTMIKVFADARMWQMALGMKEKMLEAGVTPN 1540
RVDLAQ+IYRE+++LES G LKLDVFTYST+IKVFAD ++WQMAL +K+ ML AGV+ N
Sbjct: 309 GRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKVFADVKLWQMALKIKQDMLSAGVSLN 368
Query: 1539 TVTWSSLISACAKAGLVDQAFVLFEEMLLANCMPNSQCCNVLLYACVKAFQYDRAFRLFQ 1360
V WSSLI+ACA AGLV+QA LFEEMLLA C PN+QC N++L ACV+A+QYDRAFR F
Sbjct: 369 IVAWSSLINACAHAGLVEQAIQLFEEMLLAGCEPNTQCFNIILNACVEAYQYDRAFRFFH 428
Query: 1359 SWKRNSFQMVIGDHCSNAYG-----------NIANRKNLSQGGSQVPFKPTTSTYNVLMK 1213
SWK G+ ++ G N + ++ + PF PTT+TYN+L+K
Sbjct: 429 SWKGKKMLGSSGEGYNSNIGQGHMHDVTSIPNGISNSHILNFAERFPFTPTTTTYNILLK 488
Query: 1212 ACGTDHHRAKALMDEMTRFGLCPNHISWSTLIGVYGGSGDVKSAVQVLKTMRESGVQPDV 1033
ACGTD++ AKAL+ EM GL PN ISWS LI + G S +V+ A+++LKTM ++G++PDV
Sbjct: 489 ACGTDYYHAKALIKEMETVGLSPNQISWSILIDICGASSNVEGAIEILKTMGDAGIKPDV 548
Query: 1032 VAYTAAIKVCVKQRELNSAFSLFAEMKKYQIQPNMVTYNTLLRARTRYGSLEEVQQCLSI 853
+AYT AIKVCV+ + A +L+ EMK YQI+PN VTYNTLL+AR++YG L EVQQCL+I
Sbjct: 549 IAYTTAIKVCVESKNFMQALTLYEEMKCYQIRPNWVTYNTLLKARSKYGFLHEVQQCLAI 608
Query: 852 YQDMRKAGFKPNDYYLKELIEEWCEGIIQDNRWPQGHLNSSNKKDLGGPHSLLLEKVASH 673
YQDMRKAG+KPNDYYL+ELIEEWCEG+IQ+NR QG +SSNK + P SLLLEK+A+H
Sbjct: 609 YQDMRKAGYKPNDYYLEELIEEWCEGVIQNNREKQGEFSSSNKSESERPQSLLLEKIAAH 668
Query: 672 LQKGNAETKSIAVDLRGLTKVEARIVVLAVLRMIKENYHPGN 547
L K A+ +A+D++GLTKVEAR+VVLAVLRMIKENY G+
Sbjct: 669 LLKRVADI--LAIDVQGLTKVEARLVVLAVLRMIKENYGLGH 708
>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 558 bits (1439), Expect = e-156
Identities = 285/468 (60%), Positives = 348/468 (74%), Gaps = 15/468 (3%)
Frame = -2
Query: 1908 AQGLHHELSAQKINPNLYVFNSLMNVNARDLSYTMCIYKHMQILGVAPDMASYNILLKSC 1729
++ ++ +L Q + PN++VFNSLMNVNA DL+YT +YK+MQ LGV DMASYNILLK+C
Sbjct: 280 SRNIYQDLVNQNVIPNIFVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNILLKAC 339
Query: 1728 CLAARVDLAQEIYREVEYLESRGSLKLDVFTYSTMIKVFADARMWQMALGMKEKMLEAGV 1549
CLA RVDLAQ+IYREV++LE+ G LKLDVFTYST++KVFADA++W+MAL +KE M AGV
Sbjct: 340 CLAGRVDLAQDIYREVKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGV 399
Query: 1548 TPNTVTWSSLISACAKAGLVDQAFVLFEEMLLANCMPNSQCCNVLLYACVKAFQYDRAFR 1369
+PN VTWSSLIS+CA +GLV+ A LFEEM+ A C PN+QCCN LL+ACV+ Q+DRAFR
Sbjct: 400 SPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGCEPNTQCCNTLLHACVEGRQFDRAFR 459
Query: 1368 LFQSWKRNSFQMVI---------------GDHCSNAYGNIANRKNLSQGGSQVPFKPTTS 1234
LF+SWK I C+ N + + FKPT +
Sbjct: 460 LFRSWKEKELWDGIERKSSTDNNLDADSTSQLCNTKMPNAPSHVHQISFVGNFAFKPTIT 519
Query: 1233 TYNVLMKACGTDHHRAKALMDEMTRFGLCPNHISWSTLIGVYGGSGDVKSAVQVLKTMRE 1054
TYN+LMKACGTD++ AKALM+EM GL PNHISWS L+ + G S DV+SAVQ+L TMR
Sbjct: 520 TYNILMKACGTDYYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRM 579
Query: 1053 SGVQPDVVAYTAAIKVCVKQRELNSAFSLFAEMKKYQIQPNMVTYNTLLRARTRYGSLEE 874
+GV PDVVAYT AIKVCV+ + AFSLF EMK+++IQPN+VTY+TLLRAR+ YGSL E
Sbjct: 580 AGVDPDVVAYTTAIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHE 639
Query: 873 VQQCLSIYQDMRKAGFKPNDYYLKELIEEWCEGIIQDNRWPQGHLNSSNKKDLGGPHSLL 694
VQQCL+IYQDMRK+GFK ND+YLKELI EWCEG+IQ N + NK D+G P L+
Sbjct: 640 VQQCLAIYQDMRKSGFKSNDHYLKELIAEWCEGVIQKNNQQPVEITPCNKIDIGKPRCLI 699
Query: 693 LEKVASHLQKGNAETKSIAVDLRGLTKVEARIVVLAVLRMIKENYHPG 550
LEKVA HLQK AE S+ +DL+ LTKVEARIVVLAVLRMIKENY G
Sbjct: 700 LEKVADHLQKSFAE--SLTIDLQELTKVEARIVVLAVLRMIKENYALG 745