BLASTX nr result

ID: Atractylodes22_contig00004113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004113
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34836.1| unknown [Lotus japonicus]                              162   2e-38
ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32,...   162   3e-38
ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32,...   160   1e-37
ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32,...   160   1e-37
ref|XP_002303597.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>gb|AFK34836.1| unknown [Lotus japonicus]
          Length = 315

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/109 (73%), Positives = 93/109 (85%)
 Frame = +2

Query: 2   LTKDNIELQFATNHVGNFLLTNLLLETMKKTARESGKEGRIVILSSFFYHVTYKGGIRFD 181
           L++DNIELQFATNH+G+FLLTNLLLETMKKT RE  +EGRIVILSS  +   Y+GGI FD
Sbjct: 125 LSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECNREGRIVILSSEAHRFPYQGGICFD 184

Query: 182 KINDEKSYSPLYAYGQSKLANLLHANELGRRLQEEGVNITANAVHPGII 328
           KINDE  YS  +AYGQSKLAN+LHANEL RRL+EEGV+IT N++HPG I
Sbjct: 185 KINDESGYSSYFAYGQSKLANILHANELARRLKEEGVDITVNSLHPGSI 233


>ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform
           1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed
           protein product [Vitis vinifera]
          Length = 315

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/110 (72%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   LTKDNIELQFATNHVGNFLLTNLLLETMKKTARESGKEGRIVILSSFFYHVTYKGGIRFD 181
           L+ DNIELQFATNH+G+FLLTNLLLETMK TARESG+EGRIV +SS  +   Y  GI FD
Sbjct: 125 LSHDNIELQFATNHLGHFLLTNLLLETMKNTARESGREGRIVNVSSEGHRFPYSEGICFD 184

Query: 182 KINDEKSYSPLYAYGQSKLANLLHANELGRRLQEEGVNITANAVHPGIIS 331
           KINDE +Y+ +YAYGQSKLAN+LHANEL +RLQEEGV ITAN++HPG I+
Sbjct: 185 KINDESAYNSVYAYGQSKLANILHANELAKRLQEEGVEITANSLHPGAIA 234


>ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed
           protein product [Vitis vinifera]
          Length = 313

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/109 (70%), Positives = 95/109 (87%)
 Frame = +2

Query: 2   LTKDNIELQFATNHVGNFLLTNLLLETMKKTARESGKEGRIVILSSFFYHVTYKGGIRFD 181
           L+KDNIE+ FATNH+G+FLLT+LLL+TMKKT +ESGKEGRIVI+SS  +  TY+GGIRFD
Sbjct: 124 LSKDNIEMLFATNHLGHFLLTSLLLDTMKKTTQESGKEGRIVIVSSEGHRFTYRGGIRFD 183

Query: 182 KINDEKSYSPLYAYGQSKLANLLHANELGRRLQEEGVNITANAVHPGII 328
            IND+  YS  +AYGQSKLAN+LHANEL RR +E+GV+ITAN++HPG I
Sbjct: 184 NINDKSGYSSPFAYGQSKLANVLHANELARRFKEDGVDITANSLHPGAI 232


>ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like
           [Vitis vinifera] gi|147792549|emb|CAN65620.1|
           hypothetical protein VITISV_040852 [Vitis vinifera]
           gi|302143827|emb|CBI22688.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/110 (71%), Positives = 94/110 (85%)
 Frame = +2

Query: 2   LTKDNIELQFATNHVGNFLLTNLLLETMKKTARESGKEGRIVILSSFFYHVTYKGGIRFD 181
           L+KDNIELQFATNH+G+FLLTNLLLETMKKTARES KEGRIV +SS  +  +Y  GIRFD
Sbjct: 125 LSKDNIELQFATNHIGHFLLTNLLLETMKKTARESNKEGRIVNVSSRRHRFSYHEGIRFD 184

Query: 182 KINDEKSYSPLYAYGQSKLANLLHANELGRRLQEEGVNITANAVHPGIIS 331
            IND+  Y+ L AYGQSKLAN+LHANEL RRL+++G NITAN++HPG I+
Sbjct: 185 MINDQSGYNRLSAYGQSKLANVLHANELSRRLKDDGANITANSLHPGAIA 234


>ref|XP_002303597.1| predicted protein [Populus trichocarpa] gi|222841029|gb|EEE78576.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/109 (71%), Positives = 95/109 (87%)
 Frame = +2

Query: 2   LTKDNIELQFATNHVGNFLLTNLLLETMKKTARESGKEGRIVILSSFFYHVTYKGGIRFD 181
           L++DNIE+QFATNHVG+FLLT+L+L+TMKKTA ES +EGRIVI+SS  +   Y  GIRFD
Sbjct: 125 LSQDNIEMQFATNHVGHFLLTDLVLDTMKKTALESDREGRIVIVSSEAHRFAYSEGIRFD 184

Query: 182 KINDEKSYSPLYAYGQSKLANLLHANELGRRLQEEGVNITANAVHPGII 328
           KINDE  Y+ ++AYGQSKLAN+LHANEL RRL+EEGVNITAN++HPG I
Sbjct: 185 KINDESGYNSIWAYGQSKLANVLHANELTRRLKEEGVNITANSLHPGSI 233


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