BLASTX nr result

ID: Atractylodes22_contig00004007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004007
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27434.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    74   1e-11
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 74   1e-11
ref|XP_002522000.1| ubiquitin-protein ligase, putative [Ricinus ...    74   2e-11
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    73   3e-11

>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
 Frame = -3

Query: 557 YLAAGGMPPKLSTSLVHLKVLYL-EVCFMKQDELSWFLCLIRSSPNLEQITIPMCDNQKL 381
           +LA G +P +L     +LKVL+L E+ F   DE+   LCLI SSPNLE++ +        
Sbjct: 305 FLALGNVPKRLPILFNNLKVLHLDEMDFSNLDEILCSLCLITSSPNLEELRVVAYAGD-- 362

Query: 380 LVQQTSMNFLDLQDYSSYNLNHLEYLDIEGFRNLPREVEFVKLVMAKSPVLKEVLIKLNS 201
           + +   + +   Q+ S ++L  L+ + +E   N   E+EF+K ++A SP L+E+ +  + 
Sbjct: 363 IARDAVVEYFGTQNLSHHSLKRLQKVKMEEISNFEPELEFIKFILASSPSLEEMEVLRSE 422

Query: 200 TVSVDEELKILRDLLRHPLPRASPSAKFI 114
               ++E K+ ++L+R    RASP A+ I
Sbjct: 423 DTVGEDERKMWKELMR--FRRASPKAEVI 449


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
 Frame = -3

Query: 557 YLAAGGMPPKLSTSLVHLKVLYL-EVCFMKQDELSWFLCLIRSSPNLEQITIPMCDNQKL 381
           YL+ G  P +L  + +HLK + L +VCF   DE+   L L+  SPNL+++ +     Q  
Sbjct: 268 YLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELKVSASPVQPF 327

Query: 380 LVQQTSMNFLDLQDYSSYNLNHLEYLDIEGFRNLPREVEFVKLVMAKSPVLKEVLIKLNS 201
            +++   +  + +DY  Y L  LE + I     +  E+EF++ ++  SPVL+ V +  +S
Sbjct: 328 PLEEEGFDLFE-RDYFDYKLPSLESVKITDASGIRYELEFIRFLLGTSPVLETVTVS-SS 385

Query: 200 TVSVDEELKILRDLLRHPLPRASPSAKFI 114
               D ++ ++ +LLR+  PR SP A+ +
Sbjct: 386 LSDKDAKMDMVIELLRY--PRVSPRAQLL 412


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
 Frame = -3

Query: 557 YLAAGGMPPKLSTSLVHLKVLYL-EVCFMKQDELSWFLCLIRSSPNLEQITIPMCDNQKL 381
           YL+ G  P +L  + +HLK + L +VCF   DE+   L L+  SPNL+++ +     Q  
Sbjct: 268 YLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLLRLVTHSPNLKELKVSASPVQPF 327

Query: 380 LVQQTSMNFLDLQDYSSYNLNHLEYLDIEGFRNLPREVEFVKLVMAKSPVLKEVLIKLNS 201
            +++   +  + +DY  Y L  LE + I     +  E+EF++ ++  SPVL+ V +  +S
Sbjct: 328 PLEEEGFDLFE-RDYFDYKLPSLESVKITDASGIRYELEFIRFLLGTSPVLETVTVS-SS 385

Query: 200 TVSVDEELKILRDLLRHPLPRASPSAKFI 114
               D ++ ++ +LLR+  PR SP A+ +
Sbjct: 386 LSDKDAKMDMVIELLRY--PRVSPRAQLL 412


>ref|XP_002522000.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538804|gb|EEF40404.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 429

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = -3

Query: 557 YLAAG-GMPPKLSTSLVHLKVLYL-EVCFMKQDELSWFLCLIRSSPNLEQITIPMCDNQK 384
           +LAAG  +  ++STS  HL+ L L   CF   D++S  L LI SS NLE + I  C+ + 
Sbjct: 265 FLAAGDAIFTEVSTSYSHLRTLGLGSFCFANMDQVSCLLSLIGSSHNLEILDITACNCKN 324

Query: 383 LLVQQTSMNFLDLQDYSSYNLNHLEYLDIEGFRNLPREVEFVKLVMAKSPVLKEVLIKLN 204
             V +  + F + Q   S +LNHL    +  F     E+ FVK V++ SP+LKE+ ++  
Sbjct: 325 EQVPEPVLEFWEEQHDFSLSLNHLRKATVRSFHGKDHEMRFVKSVLSNSPLLKEMTVECT 384

Query: 203 STVSVDEE 180
              + DE+
Sbjct: 385 RNPNFDED 392


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/152 (30%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
 Frame = -3

Query: 557 YLAAGGMPPKLSTSLVHLKVLYL-EVCFMKQDELSWFLCLIRSSPNLEQITIPMCDNQKL 381
           YL+ G  P +L  + +HLK + L +V F   +E+   L L+  SPNL+++ +     Q  
Sbjct: 268 YLSIGDDPGRLPITYIHLKTIELYQVSFEDANEILVLLRLVTHSPNLKELKVSASPIQLF 327

Query: 380 LVQQTSMNFLDLQDYSSYNLNHLEYL---DIEGFRNLPREVEFVKLVMAKSPVLKEVLIK 210
            +++   +  + +DY  Y L  LE +   D+ G RN   E+EF++ ++  SPVL+ V++ 
Sbjct: 328 PLEEEGFDLFE-RDYFDYKLPSLETVKMTDVSGIRN---ELEFIRFLLGTSPVLETVVVS 383

Query: 209 LNSTVSVDEELKILRDLLRHPLPRASPSAKFI 114
            +S +  + ++ ++ +LLR+  PR SP A+F+
Sbjct: 384 -SSLIDKEAKMDMVIELLRY--PRVSPRAQFL 412


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