BLASTX nr result

ID: Atractylodes22_contig00004006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00004006
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   139   3e-53
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   139   6e-53
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   158   2e-52
ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   137   1e-49
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   138   1e-48

>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
            vinifera]
          Length = 416

 Score =  139 bits (350), Expect(2) = 3e-53
 Identities = 78/186 (41%), Positives = 111/186 (59%)
 Frame = -2

Query: 1305 DIISTLPQNIIEIILCRLPIRDAIRTSILSTKWRYSWASIPELVFDDELFEVSSNSNEYK 1126
            D IS LP +II+ IL  L IRDA+R S+LS+KWR+ W ++P LVFD++   +SS      
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 1125 KNKFVNAIFHVLLLRRGPLLHFGLTIKELNMTFEIDQIILYLSMSNTLKRFSFMHMLDNR 946
            KNK VN I HVLLL  GP+  F L+ ++     +ID+ ILYLS +  ++ F         
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRT-PIREFILEIWKGQH 124

Query: 945  YKLPTSFFSFQPLETLKLAFCAFEPPLTFNGLSMLRSLYLLYVEITAKMLQRLLVNCPLL 766
            YKLP+  ++ Q L  L+L     +PP TF G   L+SL L ++ +     + L+ +CPLL
Sbjct: 125  YKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLL 184

Query: 765  EKFVLV 748
            EKF L+
Sbjct: 185  EKFTLM 190



 Score = 97.4 bits (241), Expect(2) = 3e-53
 Identities = 59/190 (31%), Positives = 106/190 (55%), Gaps = 1/190 (0%)
 Frame = -3

Query: 689 GILLQMGFERGFTDGNKFTFAELVECLPSIVHLDISIKYLEYLGAGGMPPKLSTSLVHLK 510
           G+ + +  ++   DGN     +    LP I  L+I   +L+YL AG +P KL    + L 
Sbjct: 231 GLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLT 290

Query: 509 ILYLNVCFMEQDELSSLLCLIRSSPNLEKISILMR-DNPTLVVQQTSMNIPDLQDYSSYN 333
            L + + F   +E  + LCL+RSSPNL+++ +L R +  TL+   T++     +++ +Y+
Sbjct: 291 HLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTL---WKKEHWNYS 347

Query: 332 LNHLEYLKIKYFRNLAPEMEFVKLIMAKSPVLKKVQIKLNFTVSVDEELKILRDLVRHPF 153
             HL  +K+     + P+++F+  ++A SPVL+K+ +K     S D   ++++DL+R  F
Sbjct: 348 FAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTVK---PASGDGAWELIKDLLR--F 402

Query: 152 PRASPSAKFI 123
            RAS  A+ I
Sbjct: 403 RRASVRAEII 412


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  139 bits (350), Expect(2) = 6e-53
 Identities = 78/186 (41%), Positives = 111/186 (59%)
 Frame = -2

Query: 1305 DIISTLPQNIIEIILCRLPIRDAIRTSILSTKWRYSWASIPELVFDDELFEVSSNSNEYK 1126
            D IS LP +II+ IL  L IRDA+R S+LS+KWR+ W ++P LVFD++   +SS      
Sbjct: 6    DKISNLPGHIIDKILSLLSIRDAVRMSVLSSKWRFKWVTLPYLVFDNQCVSISSQDQTLV 65

Query: 1125 KNKFVNAIFHVLLLRRGPLLHFGLTIKELNMTFEIDQIILYLSMSNTLKRFSFMHMLDNR 946
            KNK VN I HVLLL  GP+  F L+ ++     +ID+ ILYLS +  ++ F         
Sbjct: 66   KNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRT-PIREFILEIWKGQH 124

Query: 945  YKLPTSFFSFQPLETLKLAFCAFEPPLTFNGLSMLRSLYLLYVEITAKMLQRLLVNCPLL 766
            YKLP+  ++ Q L  L+L     +PP TF G   L+SL L ++ +     + L+ +CPLL
Sbjct: 125  YKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLISSCPLL 184

Query: 765  EKFVLV 748
            EKF L+
Sbjct: 185  EKFTLM 190



 Score = 96.7 bits (239), Expect(2) = 6e-53
 Identities = 59/190 (31%), Positives = 105/190 (55%), Gaps = 1/190 (0%)
 Frame = -3

Query: 689 GILLQMGFERGFTDGNKFTFAELVECLPSIVHLDISIKYLEYLGAGGMPPKLSTSLVHLK 510
           G+ + +  ++   DGN     +    LP I  L+I   +L+YL AG +P KL    + L 
Sbjct: 231 GLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKYLAAGNVPGKLPAPCIDLT 290

Query: 509 ILYLNVCFMEQDELSSLLCLIRSSPNLEKISILMR-DNPTLVVQQTSMNIPDLQDYSSYN 333
            L + + F   +E  + LCL+RSSPNL+++ +L R +  TL+   T++     +++ +Y 
Sbjct: 291 HLSIRINFSSVEENLTALCLLRSSPNLQELEMLARPEEQTLLETSTTL---WKKEHWNYX 347

Query: 332 LNHLEYLKIKYFRNLAPEMEFVKLIMAKSPVLKKVQIKLNFTVSVDEELKILRDLVRHPF 153
             HL  +K+     + P+++F+  ++A SPVL+K+ +K     S D   ++++DL+R  F
Sbjct: 348 FAHLRVVKLTGISGVGPQLDFINFLLAYSPVLEKMTVK---PASGDGAWELIKDLLR--F 402

Query: 152 PRASPSAKFI 123
            RAS  A+ I
Sbjct: 403 RRASVRAEII 412


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 426

 Score =  158 bits (399), Expect(2) = 2e-52
 Identities = 84/186 (45%), Positives = 119/186 (63%)
 Frame = -2

Query: 1305 DIISTLPQNIIEIILCRLPIRDAIRTSILSTKWRYSWASIPELVFDDELFEVSSNSNEYK 1126
            D IS+LP ++++ IL +L IRDA+RTS LS KWRY WA IP LVFD++   + S      
Sbjct: 16   DRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTLI 75

Query: 1125 KNKFVNAIFHVLLLRRGPLLHFGLTIKELNMTFEIDQIILYLSMSNTLKRFSFMHMLDNR 946
            K+K VN I HVLLL  GP+  F L+ ++L    +ID+ IL+LS S ++K F        R
Sbjct: 76   KDKLVNIIDHVLLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRS-SIKEFILEIWKGQR 134

Query: 945  YKLPTSFFSFQPLETLKLAFCAFEPPLTFNGLSMLRSLYLLYVEITAKMLQRLLVNCPLL 766
            YK+P+S FSF+ L  L+L  C  +PPLTF G   L+SL L ++ +T  + + L+ +CPLL
Sbjct: 135  YKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLL 194

Query: 765  EKFVLV 748
            E+  L+
Sbjct: 195  ERLTLM 200



 Score = 75.9 bits (185), Expect(2) = 2e-52
 Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
 Frame = -3

Query: 689 GILLQMGFERGFTDGNKFTFAELVECLPSIVHLDISIKYLEYLGAGGMPPKLSTSLVHLK 510
           G+ + +  +R    G+          LP I  L++   +L+YL  G +P +L      L 
Sbjct: 241 GLYVNVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLN 300

Query: 509 ILYLNVCFMEQDELSSLLCLIRSSPNLEKISILMRDNPTLVVQQTSM-NIPDLQDYSSYN 333
            L + + F + +E S+ LCL+RSSPN++++ +L R       +QTS+  I +  +   +N
Sbjct: 301 YLSIRINFNDLEENSAALCLLRSSPNVQELEMLARPE-----EQTSLGTITNFWEDDHWN 355

Query: 332 --LNHLEYLKIKYFRNLAPEMEFVKLIMAKSPVLKKVQIKLNFTVSVDEELKILRDLVRH 159
                L  ++I     +  E++F+  +++ SPVL+++ +K     S D   +++++L+R 
Sbjct: 356 NLFGQLRLVRIVGISGIRCELDFMNFLLSNSPVLERMTVK---PASSDGGWELIKELLR- 411

Query: 158 PFPRASPSAKFI 123
            F RAS  A+ I
Sbjct: 412 -FRRASARAEII 422


>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
          Length = 427

 Score =  137 bits (345), Expect(2) = 1e-49
 Identities = 76/186 (40%), Positives = 111/186 (59%)
 Frame = -2

Query: 1305 DIISTLPQNIIEIILCRLPIRDAIRTSILSTKWRYSWASIPELVFDDELFEVSSNSNEYK 1126
            D IS LP ++I+ +L  L IR+A+RTS+LS+KWRY WA++P LVFD     V+S  +   
Sbjct: 17   DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 1125 KNKFVNAIFHVLLLRRGPLLHFGLTIKELNMTFEIDQIILYLSMSNTLKRFSFMHMLDNR 946
            KNK +  I HVLLL  GP+  F L+ ++L    +ID+  L+L    ++K F        R
Sbjct: 77   KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHL-CRKSIKEFVLEIWKGQR 135

Query: 945  YKLPTSFFSFQPLETLKLAFCAFEPPLTFNGLSMLRSLYLLYVEITAKMLQRLLVNCPLL 766
            YK+ +  FS Q L  L+L  C  +PP TF G   L+SL L +V +   + + L+ +CPLL
Sbjct: 136  YKIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLL 195

Query: 765  EKFVLV 748
            E+  L+
Sbjct: 196  ERLTLM 201



 Score = 87.4 bits (215), Expect(2) = 1e-49
 Identities = 56/189 (29%), Positives = 97/189 (51%)
 Frame = -3

Query: 689 GILLQMGFERGFTDGNKFTFAELVECLPSIVHLDISIKYLEYLGAGGMPPKLSTSLVHLK 510
           G+ L     +    G      +    LP +  L++   +L+YL  G +P KL    + L 
Sbjct: 242 GLYLNFEINQSRLHGGSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLS 301

Query: 509 ILYLNVCFMEQDELSSLLCLIRSSPNLEKISILMRDNPTLVVQQTSMNIPDLQDYSSYNL 330
            L + + F +  E+S+ LCL+RSSPNL+++ IL R     V+   +    D+  Y S  +
Sbjct: 302 YLSIRINFNDLKEISASLCLLRSSPNLQELEILARPEEQTVLLTHTYCWEDV--YFSCPV 359

Query: 329 NHLEYLKIKYFRNLAPEMEFVKLIMAKSPVLKKVQIKLNFTVSVDEELKILRDLVRHPFP 150
             L Y+KI     + PE++F+  ++  SPVL+++ +K    V     L+++++L+R  F 
Sbjct: 360 MQLRYVKIDGISGIKPELDFINFLLLHSPVLERMTVKPVANVG----LELMKELLR--FR 413

Query: 149 RASPSAKFI 123
           RAS  A+ I
Sbjct: 414 RASGQAEII 422


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score =  138 bits (348), Expect(2) = 1e-48
 Identities = 80/186 (43%), Positives = 110/186 (59%)
 Frame = -2

Query: 1305 DIISTLPQNIIEIILCRLPIRDAIRTSILSTKWRYSWASIPELVFDDELFEVSSNSNEYK 1126
            D IS+LP +II+ IL  LPI++A+RTSILSTKWRY WA++P LVFD +    +S      
Sbjct: 249  DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 308

Query: 1125 KNKFVNAIFHVLLLRRGPLLHFGLTIKELNMTFEIDQIILYLSMSNTLKRFSFMHMLDNR 946
            K+K    I HVLLL  GP+  F L+ +EL    +ID+  L+L+    +K F        R
Sbjct: 309  KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLT-RRPVKEFVLEIWKGQR 367

Query: 945  YKLPTSFFSFQPLETLKLAFCAFEPPLTFNGLSMLRSLYLLYVEITAKMLQRLLVNCPLL 766
            YK+P+  FS Q L  L+L  C   PP TF G   L+SL L +V ++    + L+  CPLL
Sbjct: 368  YKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLL 427

Query: 765  EKFVLV 748
            E+  L+
Sbjct: 428  ERLTLM 433



 Score = 82.8 bits (203), Expect(2) = 1e-48
 Identities = 53/175 (30%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
 Frame = -3

Query: 689 GILLQMGFERGFTDGNKFTFAELVECLPSIVHLDISIKYLEYLGAGGMPPKLSTSLVHLK 510
           G+ +     +G   G      E +  LP I  L+I   +L+YL  G +P KL T  + L 
Sbjct: 474 GLYVNFESSQGRLHGRTSNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLS 533

Query: 509 ILYLNVCFMEQDELSSLLCLIRSSPNLEKISILMR-DNPTLVVQQTSMNIPDLQDYSSYN 333
            L + + F +  E+S+ LCL RSSPNL ++ IL R +   L +   +    D+  Y  + 
Sbjct: 534 YLSIRINFYDSKEISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDV--YLDWP 591

Query: 332 LNHLEYLKIKYFRNLAPEMEFVKLIMAKSPVLKKVQIK--LNFTVSVDEELKILR 174
           +  + +++I     + PE++F+  I+  SPVL+++ +K  LN +  + +EL  LR
Sbjct: 592 VMRVRHVRIDGISGIKPELDFISFILLYSPVLERMTVKPALNASPELVKELLRLR 646


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