BLASTX nr result

ID: Atractylodes22_contig00003457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003457
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   304   3e-80
emb|CBI16098.3| unnamed protein product [Vitis vinifera]              298   1e-78
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]   290   6e-76
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   278   2e-72
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   277   4e-72

>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score =  304 bits (778), Expect = 3e-80
 Identities = 165/266 (62%), Positives = 187/266 (70%), Gaps = 14/266 (5%)
 Frame = -1

Query: 1109 LPPTMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVESMPAIEISDVQVSSELH 930
            LP TMSEFLMGSGFDRLL+QLSQIEING GR EHPPASKAAVESMP IEI    + +ELH
Sbjct: 128  LPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELH 187

Query: 929  CAVCKEAFLLGAEAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLS-- 756
            CAVCKEAF LG+EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N  +S  
Sbjct: 188  CAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGN 247

Query: 755  -----EQNEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNNTS 591
                   NEEE+  VGLTIWRLP                 GERELPVVYTEMDGGFNN S
Sbjct: 248  EALSPAPNEEET--VGLTIWRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN-S 302

Query: 590  GTPRRIMWESRRNRARGEGG-LGRAFRNMFSFFGRLRPSSNSNGT------SMNXXXXXX 432
            G PRRI W SRR+R+R  GG LGRAFRN+FSF GR R SS+S+        S+       
Sbjct: 303  GAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHSHS 362

Query: 431  XXXXXRMTSRRNRTWILDEQNGLSRW 354
                 R   RR+R W+L++Q+G SRW
Sbjct: 363  SSVFSRYVRRRSRAWVLEDQSGNSRW 388


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  298 bits (764), Expect = 1e-78
 Identities = 167/291 (57%), Positives = 191/291 (65%), Gaps = 7/291 (2%)
 Frame = -1

Query: 1109 LPPTMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVESMPAIEISDVQVSSELH 930
            LP TMSEFLMGSGFDRLL+QLSQIEING GR EHPPASKAAVESMP IEI    + +ELH
Sbjct: 244  LPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELH 303

Query: 929  CAVCKEAFLLGAEAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLSEQ 750
            CAVCKEAF LG+EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N      
Sbjct: 304  CAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRN------ 357

Query: 749  NEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNNTSGTPRRIM 570
                S  VGLTIWRLP                 GERELPVVYTEMDGGFNN SG PRRI 
Sbjct: 358  ----SPTVGLTIWRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN-SGAPRRIS 410

Query: 569  WESRRNRARGEGG-LGRAFRNMFSFFGRLRPSSNSNGT------SMNXXXXXXXXXXXRM 411
            W SRR+R+R  GG LGRAFRN+FSF GR R SS+S+        S+            R 
Sbjct: 411  WASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRSTSEPGSITRSHSHSSSVFSRY 470

Query: 410  TSRRNRTWILDEQNGLSRW*RTGCNHGHLLSHLIFWSSEIESNSILKWIFL 258
              RR+R W+L++Q+G SR   +       +  L+F SS     S L  I +
Sbjct: 471  VRRRSRAWVLEDQSGNSRCFYSNLQLSSEILFLVFISSSFHLLSHLSLILI 521


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score =  290 bits (741), Expect = 6e-76
 Identities = 154/226 (68%), Positives = 170/226 (75%), Gaps = 8/226 (3%)
 Frame = -1

Query: 1109 LPPTMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVESMPAIEISDVQVSSELH 930
            LP TMSEFLMGSGFDRLL+QLSQIEING GR EHPPASKAAVESMP IEI    + +ELH
Sbjct: 238  LPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHPPASKAAVESMPTIEIVSSHIVTELH 297

Query: 929  CAVCKEAFLLGAEAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLS-- 756
            CAVCKEAF LG+EAREMPCKHIYH +CILPWL+LRNSCPVCRH+LPTD+  + N  +S  
Sbjct: 298  CAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGT 357

Query: 755  -----EQNEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNNTS 591
                   NEEE+  VGLTIWRLP                 GERELPVVYTEMDGGFNN S
Sbjct: 358  EALSPAPNEEET--VGLTIWRLP--GGGFAVGRFSGGRRAGERELPVVYTEMDGGFNN-S 412

Query: 590  GTPRRIMWESRRNRARGEGG-LGRAFRNMFSFFGRLRPSSNSNGTS 456
            G PRRI W SRR+R+R  GG LGRAFRN+FSF GR R SS+S+  S
Sbjct: 413  GAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFRSSSSSSSRS 458


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
            gi|449527992|ref|XP_004170991.1| PREDICTED: E3
            ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score =  278 bits (711), Expect = 2e-72
 Identities = 143/259 (55%), Positives = 177/259 (68%), Gaps = 7/259 (2%)
 Frame = -1

Query: 1109 LPPTMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVESMPAIEISDVQVSSELH 930
            +P TMSEFLMG+GFDRLL+QL+Q+EING GR+E+PPASKAAVESMP IEI +  V S+ H
Sbjct: 125  VPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVDSDSH 184

Query: 929  CAVCKEAFLLGAEAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLSEQ 750
            CAVCKEAF +G EAREMPCKHIYH  CI+PWL++RNSCPVCRH+LP++  +    G+S++
Sbjct: 185  CAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAG-GVSDR 243

Query: 749  NEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNNTSGTPRRIM 570
              +E   VGLTIWRLP                 GER+ P VYTEMDGGFN  +G PRR+ 
Sbjct: 244  VVDEET-VGLTIWRLP--GGGFAVGRFSGGRLAGERDPPAVYTEMDGGFNG-NGVPRRVS 299

Query: 569  WESRRNRARGEGGLGRAFRNMFSFFGRLRPSSNSNGTSMNXXXXXXXXXXXRMTS----- 405
            W SRR+R R   G+GR FRN+FSFFGR R SS+S+ +  N             +S     
Sbjct: 300  WASRRSRGRESRGIGRTFRNIFSFFGRFRSSSSSSSSPSNESESVSRSHSHSSSSVFSRY 359

Query: 404  --RRNRTWILDEQNGLSRW 354
              R+NR W+L+ QN   RW
Sbjct: 360  LRRQNRAWVLENQNENGRW 378


>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  277 bits (708), Expect = 4e-72
 Identities = 147/253 (58%), Positives = 175/253 (69%), Gaps = 1/253 (0%)
 Frame = -1

Query: 1109 LPPTMSEFLMGSGFDRLLDQLSQIEINGLGRAEHPPASKAAVESMPAIEISDVQVSSELH 930
            LP ++SEFL+GSGFDRLL+QLSQ+EING+GR E PPASKAA+E+MP IEI+D  V++E H
Sbjct: 116  LPASVSEFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMPTIEIADAHVNTEHH 175

Query: 929  CAVCKEAFLLGAEAREMPCKHIYHPNCILPWLTLRNSCPVCRHQLPTDLTNSNNLGLSEQ 750
            CAVCKE F LGAEAREMPCKHIYH +CILPWL+LRNSCPVCRH+LP++  NS     +EQ
Sbjct: 176  CAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPE--SNEQ 233

Query: 749  NEEESAIVGLTIWRLPXXXXXXXXXXXXXXXXXGERELPVVYTEMDGGFNNTSGTPRRIM 570
              EE+  VGLTIWRLP                 GERELPVVYTEMDGGFNN  G PRRI 
Sbjct: 234  TPEET--VGLTIWRLP--GGGFAVGRFSGGRRGGERELPVVYTEMDGGFNN-GGAPRRIS 288

Query: 569  WESRRNRARGEGGLGRAFRNMFSFF-GRLRPSSNSNGTSMNXXXXXXXXXXXRMTSRRNR 393
            W SR NR +  GGLGR FRN+ + F G    SS+S+  S +             +SR  R
Sbjct: 289  WTSRTNRNQERGGLGRMFRNLLACFGGHGSSSSSSSSESGSRRRSSSSLLTLGSSSRNRR 348

Query: 392  TWILDEQNGLSRW 354
             W L+  +G+ RW
Sbjct: 349  AWALEVNSGIRRW 361


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