BLASTX nr result

ID: Atractylodes22_contig00003246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003246
         (1193 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC89654.1| RBP42 [Elaeis guineensis]                              290   6e-76
ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816...   280   4e-73
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   280   5e-73
ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-lik...   276   7e-72
ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-l...   273   5e-71

>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  290 bits (741), Expect = 6e-76
 Identities = 159/284 (55%), Positives = 190/284 (66%), Gaps = 6/284 (2%)
 Frame = +1

Query: 34  MDP--KKRKMEENGGQFTTDVTNDVVAXXXXXXXXXXXXQDARKILEPFTKEXXXXXXXX 207
           MDP  KKRK +ENG          VVA            +DARKI+EPFT+E        
Sbjct: 1   MDPTSKKRKSDENGA---------VVASPALLTP-----EDARKIVEPFTREHLLDIVRE 46

Query: 208 XXXXXXXXXXXXXSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKTT 387
                        +IAD DP QRKLFIRG+GWETTT+ LR++FS++GELEEA+VI DK T
Sbjct: 47  AMCRDAGVLDAVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKAT 106

Query: 388 GKSKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLS----NVDVSMRKIYVG 555
           GKSKGYGF+TFRH+DGA++ALK+PSKKIDGR+TV QLAAA   +     +DVS+RKIYVG
Sbjct: 107 GKSKGYGFITFRHIDGALLALKEPSKKIDGRMTVTQLAAAGTTAAAPPAIDVSLRKIYVG 166

Query: 556 NVPFEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNI 735
           NVP ++ S+RLL+HFSSYGEIEEGPLGFDKQ+GK +GFA FVYKT EGA  SLVDP KNI
Sbjct: 167 NVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNI 226

Query: 736 DGHQVMCKMATDXXXXXXXXXXXXXXMAGDAPPHGSMPGSMNAG 867
           DGH ++CK+A D               AG A P G + G    G
Sbjct: 227 DGHHLVCKLAID-----GKKVKPGAPAAGAAAPVGGVQGQRMGG 265


>ref|XP_003520185.1| PREDICTED: uncharacterized protein LOC100816590 [Glycine max]
          Length = 384

 Score =  280 bits (717), Expect = 4e-73
 Identities = 147/250 (58%), Positives = 174/250 (69%), Gaps = 6/250 (2%)
 Frame = +1

Query: 40  PKKRKMEENGGQFTTD------VTNDVVAXXXXXXXXXXXXQDARKILEPFTKEXXXXXX 201
           PKKRK +ENG   TTD           +A            +D RKIL+PF++E      
Sbjct: 4   PKKRKTQENGDT-TTDSPPPQSTEEAPLAAATPAPASPLASEDIRKILQPFSQEQLLDLL 62

Query: 202 XXXXXXXXXXXXXXXSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDK 381
                          ++AD D T RKLF+RG+  ETTT+ LRS+FS FGEL+EAIVI DK
Sbjct: 63  QSASLRHPDVLDAVRAVADCDSTLRKLFVRGLAGETTTETLRSVFSGFGELDEAIVIMDK 122

Query: 382 TTGKSKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGNV 561
            TG+SKGYGFV FRHVDGAI+ALK PSKKIDGR+TV QLAAA      DVS+RK++VGNV
Sbjct: 123 ATGRSKGYGFVVFRHVDGAILALKDPSKKIDGRMTVTQLAAAGGPGGGDVSLRKVFVGNV 182

Query: 562 PFEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDG 741
           PFEISSERLL  F  +GE+EEGPLGFDK SGK +GFAFFVYKTEEGAR SLV+P+K I+G
Sbjct: 183 PFEISSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIEG 242

Query: 742 HQVMCKMATD 771
           HQV+CK+A D
Sbjct: 243 HQVICKLAVD 252


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  280 bits (716), Expect = 5e-73
 Identities = 156/291 (53%), Positives = 191/291 (65%), Gaps = 15/291 (5%)
 Frame = +1

Query: 43  KKRKMEENGGQFTTDVTNDVVAXXXXXXXXXXXXQDARKILEPFTKEXXXXXXXXXXXXX 222
           KKRKM+ENG   T   +   +A            +DARKI+EPF  +             
Sbjct: 5   KKRKMDENGLVSTDGDSLTKLAP-----------EDARKIIEPFGHDQLLEILQNAAVRH 53

Query: 223 XXXXXXXXSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKTTGKSKG 402
                   SIAD D TQRKLFIRG+GW+TTT+ LR +FSA+GELEEA+VI DK T KSKG
Sbjct: 54  LDVLDAIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKG 113

Query: 403 YGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAA------ARDLSNVDVSMRKIYVGNVP 564
           YGFVTF+HVDGA++ALK+PSKKIDGR+TV QLAA      A + S VDVSMRKIYV NVP
Sbjct: 114 YGFVTFKHVDGALLALKEPSKKIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVP 173

Query: 565 FEISSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDGH 744
            ++ ++RLL+HFSSYGEIEEGPLGFDKQ+GK +GFA FVYKT E A+ +LVDP K IDG 
Sbjct: 174 VDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGR 233

Query: 745 QVMCKMATD-XXXXXXXXXXXXXXMAGDA--------PPHGSMPGSMNAGY 870
           Q++CK+A +               + G+A        PP GSMPGS+ + Y
Sbjct: 234 QLVCKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGVPPQGSMPGSLGSQY 284


>ref|XP_003529367.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Glycine max]
          Length = 384

 Score =  276 bits (706), Expect = 7e-72
 Identities = 145/246 (58%), Positives = 173/246 (70%), Gaps = 3/246 (1%)
 Frame = +1

Query: 43  KKRKMEENGGQFTTDVT---NDVVAXXXXXXXXXXXXQDARKILEPFTKEXXXXXXXXXX 213
           KKRK EENG   TTD     +   +            +D RKIL+PF++E          
Sbjct: 5   KKRKTEENGD--TTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQSAS 62

Query: 214 XXXXXXXXXXXSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKTTGK 393
                      ++AD D T RKLF+RG+  ETTT+ LR +FSAFGEL+EAIVI DK TG+
Sbjct: 63  LRHPDVLDAVRAVADLDSTLRKLFVRGLAGETTTETLRGVFSAFGELDEAIVIIDKATGR 122

Query: 394 SKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGNVPFEI 573
           SKGYGFV F HVDGAI+ALK+PSKKIDGR+TV QLAAA      DVS+RK++VGNVPFEI
Sbjct: 123 SKGYGFVVFSHVDGAILALKEPSKKIDGRMTVTQLAAAGGPGGGDVSLRKVFVGNVPFEI 182

Query: 574 SSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDGHQVM 753
           SSERLL  F  +GE+EEGPLGFDK SGK +GFAFFVYKTEEGAR SLV+P+K I+GHQV+
Sbjct: 183 SSERLLDEFLKFGEVEEGPLGFDKSSGKSRGFAFFVYKTEEGARASLVEPLKTIEGHQVI 242

Query: 754 CKMATD 771
           CK+A D
Sbjct: 243 CKLAVD 248


>ref|XP_003608138.1| Heterogeneous nuclear ribonucleoprotein A3-like protein [Medicago
           truncatula] gi|355509193|gb|AES90335.1| Heterogeneous
           nuclear ribonucleoprotein A3-like protein [Medicago
           truncatula]
          Length = 401

 Score =  273 bits (699), Expect = 5e-71
 Identities = 140/246 (56%), Positives = 173/246 (70%)
 Frame = +1

Query: 34  MDPKKRKMEENGGQFTTDVTNDVVAXXXXXXXXXXXXQDARKILEPFTKEXXXXXXXXXX 213
           M+ KKRK EENG     D  +   +             D RKIL+PFT+E          
Sbjct: 1   MEFKKRKTEENG-----DANSPPSSIDAAVIPPALTSDDIRKILQPFTQEQLLDLLQSAS 55

Query: 214 XXXXXXXXXXXSIADSDPTQRKLFIRGIGWETTTDKLRSIFSAFGELEEAIVITDKTTGK 393
                      S+AD D T+RKLF+RG+  ETTT+ LR++FS++G+L+EAIVI DK TG+
Sbjct: 56  LQHPDILDAVRSVADRDTTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGR 115

Query: 394 SKGYGFVTFRHVDGAIMALKQPSKKIDGRITVAQLAAARDLSNVDVSMRKIYVGNVPFEI 573
           SKGYGFV +RHVDGA++ALK+PSKKIDGR+TV QLAAA      DVS RK++VGNVPFE+
Sbjct: 116 SKGYGFVVYRHVDGAVLALKEPSKKIDGRMTVTQLAAAGSTGG-DVSSRKVFVGNVPFEV 174

Query: 574 SSERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLVDPIKNIDGHQVM 753
           S+E LLS FS YGEIEEGPLGFDK SGK +GFAFFVYKTEEGA+NS+ + +K +DGHQV+
Sbjct: 175 SAESLLSEFSKYGEIEEGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAESMKTVDGHQVI 234

Query: 754 CKMATD 771
           CK A D
Sbjct: 235 CKFAVD 240


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