BLASTX nr result

ID: Atractylodes22_contig00003193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003193
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   124   5e-26
ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   116   2e-23
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   116   2e-23
emb|CBI15109.3| unnamed protein product [Vitis vinifera]              114   5e-23
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...   114   5e-23

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 622

 Score =  124 bits (312), Expect = 5e-26
 Identities = 58/99 (58%), Positives = 77/99 (77%)
 Frame = +1

Query: 1108 YILVAKFCDVSGGAWFSLFDEDGEKLIGCSAENLVKMKS*EEGSDFQLQLKKAKWVPHLL 1287
            YI+V K  D SG  W S F+ +GE++IGCSA+ L K+KS E+G+ ++L+LK+A W PHL 
Sbjct: 518  YIMVVKVSDASGEGWVSAFNNEGERIIGCSADELDKLKSQEDGNSYELKLKEATWSPHLF 577

Query: 1288 RVSVAPKEYNNVKRQNITVRSIAQVDFSAETRVMLEEIS 1404
            RVSVA  EYNN KRQ ITVR++A +DF+AE+R +LEEIS
Sbjct: 578  RVSVAQNEYNNEKRQRITVRAVAPLDFAAESRFLLEEIS 616


>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
            partial [Cucumis sativus]
          Length = 560

 Score =  116 bits (290), Expect = 2e-23
 Identities = 57/100 (57%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1108 YILVAKFCDVSGGAWFSLFDEDGEKLIGCSAENLVKMKS*-EEGSDFQLQLKKAKWVPHL 1284
            YI+V +  D SG AW S F+E+ E+++GCSA+ L ++KS   E + +QL+LK+A WVPHL
Sbjct: 456  YIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHL 515

Query: 1285 LRVSVAPKEYNNVKRQNITVRSIAQVDFSAETRVMLEEIS 1404
             RVSV+  EYNN KRQ ITVRS+A VDF+AE+R +LEEI+
Sbjct: 516  FRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 555


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 603

 Score =  116 bits (290), Expect = 2e-23
 Identities = 57/100 (57%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1108 YILVAKFCDVSGGAWFSLFDEDGEKLIGCSAENLVKMKS*-EEGSDFQLQLKKAKWVPHL 1284
            YI+V +  D SG AW S F+E+ E+++GCSA+ L ++KS   E + +QL+LK+A WVPHL
Sbjct: 499  YIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHL 558

Query: 1285 LRVSVAPKEYNNVKRQNITVRSIAQVDFSAETRVMLEEIS 1404
             RVSV+  EYNN KRQ ITVRS+A VDF+AE+R +LEEI+
Sbjct: 559  FRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIA 598


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  114 bits (286), Expect = 5e-23
 Identities = 58/101 (57%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1108 YILVAKFCDVSGGAWFSLFDEDGEKLIGCSAENLVKMKS*EEGSD--FQLQLKKAKWVPH 1281
            YI+V K  D SG AW SLF+E  E++ GCSA+ L K+KS +EG +  FQ +LK+A WVPH
Sbjct: 497  YIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKS-QEGEENLFQQKLKEAIWVPH 555

Query: 1282 LLRVSVAPKEYNNVKRQNITVRSIAQVDFSAETRVMLEEIS 1404
            L R+SVA  EY N KRQ IT R++  VDF+AE+R++LEEIS
Sbjct: 556  LFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEIS 596


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1
            [Vitis vinifera]
          Length = 625

 Score =  114 bits (286), Expect = 5e-23
 Identities = 58/101 (57%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
 Frame = +1

Query: 1108 YILVAKFCDVSGGAWFSLFDEDGEKLIGCSAENLVKMKS*EEGSD--FQLQLKKAKWVPH 1281
            YI+V K  D SG AW SLF+E  E++ GCSA+ L K+KS +EG +  FQ +LK+A WVPH
Sbjct: 520  YIMVVKVSDASGEAWLSLFNEQAERMFGCSADELDKLKS-QEGEENLFQQKLKEAIWVPH 578

Query: 1282 LLRVSVAPKEYNNVKRQNITVRSIAQVDFSAETRVMLEEIS 1404
            L R+SVA  EY N KRQ IT R++  VDF+AE+R++LEEIS
Sbjct: 579  LFRISVAQHEYMNEKRQRITARAVVPVDFAAESRLLLEEIS 619


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