BLASTX nr result

ID: Atractylodes22_contig00003162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003162
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ...   289   3e-76
dbj|BAA00860.1| cyc07 [Catharanthus roseus]                           288   7e-76
gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum t...   286   3e-75
sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a g...   286   3e-75
dbj|BAA05057.1| cyc07 [Catharanthus roseus]                           284   1e-74

>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
           protein
          Length = 261

 Score =  289 bits (740), Expect = 3e-76
 Identities = 143/151 (94%), Positives = 149/151 (98%), Gaps = 1/151 (0%)
 Frame = -3

Query: 673 KNVLTNFWGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 494
           KNVLTNFWGMDFTTDKLRSLV+KWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT
Sbjct: 94  KNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 153

Query: 493 CYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 314
           CYAQSSQIRQIRRKMREIM+NQAQSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIR
Sbjct: 154 CYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIR 213

Query: 313 KVKILKAPKFDLGKLMEVHGDYSE-DVGIKM 224
           KVKILKAPKFDLGKLMEVHGDY+E D+G K+
Sbjct: 214 KVKILKAPKFDLGKLMEVHGDYNEDDIGTKL 244


>dbj|BAA00860.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score =  288 bits (737), Expect = 7e-76
 Identities = 141/145 (97%), Positives = 145/145 (100%)
 Frame = -3

Query: 673 KNVLTNFWGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 494
           KNVLTNFWGMDFTTDKLRSLV+KWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT
Sbjct: 94  KNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 153

Query: 493 CYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 314
           CYAQSSQIRQIRRKMREIM+NQAQSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIR
Sbjct: 154 CYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIR 213

Query: 313 KVKILKAPKFDLGKLMEVHGDYSED 239
           KVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 214 KVKILKAPKFDLGKLMEVHGDYNED 238


>gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
          Length = 260

 Score =  286 bits (731), Expect = 3e-75
 Identities = 141/150 (94%), Positives = 147/150 (98%)
 Frame = -3

Query: 673 KNVLTNFWGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 494
           +NVLTNF GMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKR NQQKRT
Sbjct: 94  RNVLTNFHGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRPNQQKRT 153

Query: 493 CYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 314
           CYAQSSQIRQIRRKMREIM+NQAQSCDLK+LV KFIPESIGREIEKATSSIYPLQNVFIR
Sbjct: 154 CYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVLKFIPESIGREIEKATSSIYPLQNVFIR 213

Query: 313 KVKILKAPKFDLGKLMEVHGDYSEDVGIKM 224
           KVKILKAPKFDLG+LMEVHGDYSEDVG+K+
Sbjct: 214 KVKILKAPKFDLGRLMEVHGDYSEDVGVKV 243


>sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a gi|469248|gb|AAA80978.1|
           ribosomal protein S3a [Helianthus annuus]
          Length = 260

 Score =  286 bits (731), Expect = 3e-75
 Identities = 139/150 (92%), Positives = 147/150 (98%)
 Frame = -3

Query: 673 KNVLTNFWGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 494
           KNVLTNFWGMD TTDKLRSLVKKWQSLIEAHVDVKTTD++TLRMFCIGFTKKRANQ KRT
Sbjct: 94  KNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQVKRT 153

Query: 493 CYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 314
           CYAQSSQI+QIRRKMREIM+ QAQ+CDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR
Sbjct: 154 CYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 213

Query: 313 KVKILKAPKFDLGKLMEVHGDYSEDVGIKM 224
           KVKILKAPKFD+GKLMEVHGDYSEDVG+K+
Sbjct: 214 KVKILKAPKFDIGKLMEVHGDYSEDVGVKL 243


>dbj|BAA05057.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score =  284 bits (726), Expect = 1e-74
 Identities = 139/145 (95%), Positives = 143/145 (98%)
 Frame = -3

Query: 673 KNVLTNFWGMDFTTDKLRSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 494
           KNVLTNFWGMDFTTDKLRSLV+KWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT
Sbjct: 94  KNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRT 153

Query: 493 CYAQSSQIRQIRRKMREIMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIR 314
           CYAQSSQIRQIRRKMREIM+NQA SCDLK+LVQKFIPESIGREIEKAT SIYPLQNVFIR
Sbjct: 154 CYAQSSQIRQIRRKMREIMVNQAPSCDLKDLVQKFIPESIGREIEKATPSIYPLQNVFIR 213

Query: 313 KVKILKAPKFDLGKLMEVHGDYSED 239
           KVKILKAPKFDLGKLMEVHGDY+ED
Sbjct: 214 KVKILKAPKFDLGKLMEVHGDYNED 238


Top