BLASTX nr result

ID: Atractylodes22_contig00003064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00003064
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatul...   102   4e-20
ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatul...   102   4e-20
ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|3554...   101   7e-20
ref|XP_002300080.1| f-box family protein [Populus trichocarpa] g...   100   2e-19
ref|XP_003624505.1| F-box family protein [Medicago truncatula] g...    98   8e-19

>ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509361|gb|AES90503.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 600

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
 Frame = +2

Query: 38  EDRISNLPKEIIHHILSFLDMRYAVQTSTLSKKWKHIWTSMPHLNFKSETCRTLPQYAEF 217
           ED++S+LP+ +I HILSFLD ++AVQT  LS +WKH+W  +P L   S    T+ ++A F
Sbjct: 15  EDKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIF 74

Query: 218 VKHALSHHNHRTKVFAVDLTFRGDFRQFFVKSILNYAYSHNVRQLTL-VGLTDKLSGFPQ 394
           V + L+  N  T + A++L  RGD     +K ILNY  SHN     L + L         
Sbjct: 75  VSNILTLRNSSTSLQALNLDRRGDIEPQLLKKILNYICSHNTHLHELGISLRGGSGFILN 134

Query: 395 CLFSSHTLKHLTITFSTSQRSLYYWFDSGFFPES 496
           C+ S H L  L ++        Y+  +   FP+S
Sbjct: 135 CVSSCHALTSLKLSLPPRGGHYYFTSEETLFPKS 168


>ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355507123|gb|AES88265.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 861

 Score =  102 bits (253), Expect = 4e-20
 Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
 Frame = +2

Query: 38  EDRISNLPKEIIHHILSFLDMRYAVQTSTLSKKWKHIWTSMPHLNFKSETCRTLPQYAEF 217
           ED++S+LP+ +I HILSFLD ++AVQT  LS +WKH+W  +P L   S    T+ ++A F
Sbjct: 15  EDKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKHLWARIPTLILHSSNFSTVKKFAIF 74

Query: 218 VKHALSHHNHRTKVFAVDLTFRGDFRQFFVKSILNYAYSHNVRQLTL-VGLTDKLSGFPQ 394
           V + L+  N  T + A++L  RGD     +K ILNY  SHN     L + L         
Sbjct: 75  VSNILTLRNSSTSLQALNLDRRGDIEPQLLKKILNYICSHNTHLHELGISLRGGSGFILN 134

Query: 395 CLFSSHTLKHLTITFSTSQRSLYYWFDSGFFPES 496
           C+ S H L  L ++        Y+  +   FP+S
Sbjct: 135 CVSSCHALTSLKLSLPPRGGHYYFTSEETLFPKS 168


>ref|XP_003598921.1| F-box family-1 [Medicago truncatula] gi|355487969|gb|AES69172.1|
           F-box family-1 [Medicago truncatula]
          Length = 384

 Score =  101 bits (251), Expect = 7e-20
 Identities = 57/142 (40%), Positives = 80/142 (56%)
 Frame = +2

Query: 35  EEDRISNLPKEIIHHILSFLDMRYAVQTSTLSKKWKHIWTSMPHLNFKSETCRTLPQYAE 214
           +EDRIS+LP  +I HILS L ++  VQTS LSK+WK++W  +P L   S   +TL  + +
Sbjct: 13  KEDRISDLPDGLILHILSSLKVKQTVQTSILSKRWKNLWKHLPTLTLTSSHFKTLKAFTK 72

Query: 215 FVKHALSHHNHRTKVFAVDLTFRGDFRQFFVKSILNYAYSHNVRQLTLVGLTDKLSGFPQ 394
           FV   LS  N  T +  +   + G       + ILNYA SHNV +L L G  D +   P 
Sbjct: 73  FVTPLLSLRNVPTSLHTLKFIYNGTIDPRLFEKILNYAVSHNVNELQLKGTCD-IQQLPS 131

Query: 395 CLFSSHTLKHLTITFSTSQRSL 460
           C FS +TL   ++ F  S ++L
Sbjct: 132 CFFSCNTL--TSLRFKVSPKTL 151


>ref|XP_002300080.1| f-box family protein [Populus trichocarpa]
           gi|222847338|gb|EEE84885.1| f-box family protein
           [Populus trichocarpa]
          Length = 351

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/140 (40%), Positives = 80/140 (57%), Gaps = 3/140 (2%)
 Frame = +2

Query: 38  EDRISNLPKEIIHHILSFLDMRYAVQTSTLSKKWKHIWTSMPHLNFKSETCRTLPQYAEF 217
           EDR+SNLP  IIHHILSFLD +YAVQTS L+K W+++WTS+  L+  S + R L ++ +F
Sbjct: 14  EDRLSNLPNHIIHHILSFLDAKYAVQTSVLAKGWRNLWTSVHVLHLNSNSFRRLGRFKKF 73

Query: 218 VKHALSHHNHRTKVFAVDLTFRGDFRQFFVKSILNYAYSHNVRQLTLVGLTDKLSGFPQC 397
           V   L+  NH +       T+RG    +  K ++ +A  H V  L L  L  K     Q 
Sbjct: 74  VVAVLNKLNHNSTAGTFLFTYRGRIDDYLKKRVIYFASFHGVGHLVL-DLGCKRPPVSQA 132

Query: 398 LFSSHTLKHLTI---TFSTS 448
           L +  T K + +   TF+TS
Sbjct: 133 LLNCQTFKTIKLKNATFTTS 152


>ref|XP_003624505.1| F-box family protein [Medicago truncatula]
           gi|355499520|gb|AES80723.1| F-box family protein
           [Medicago truncatula]
          Length = 357

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/142 (36%), Positives = 79/142 (55%)
 Frame = +2

Query: 38  EDRISNLPKEIIHHILSFLDMRYAVQTSTLSKKWKHIWTSMPHLNFKSETCRTLPQYAEF 217
           +DR+S+L   ++ HILS L+ ++AVQT  LS +WK++W  +P L  +S   R + ++A+F
Sbjct: 16  QDRLSDLSDCVLLHILSSLNTKHAVQTCILSTRWKNLWKRLPSLALRSSDFRNVKRFAKF 75

Query: 218 VKHALSHHNHRTKVFAVDLTFRGDFRQFFVKSILNYAYSHNVRQLTLVGLTDKLSGFPQC 397
           V   LS  N  T +  VD         + +K I+ YA SHNV+QL  V +   +  FP  
Sbjct: 76  VSRVLSLRNDSTSLHTVDFCRTAIVEPYLLKKIVKYAVSHNVQQLD-VSVAGNMEYFPPS 134

Query: 398 LFSSHTLKHLTITFSTSQRSLY 463
            FS  TL  L++  S  +R  Y
Sbjct: 135 FFSCRTLTSLSLDLSDGRRMSY 156