BLASTX nr result

ID: Atractylodes22_contig00002861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002861
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein...   160   1e-37
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   158   4e-37
dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein...   158   5e-37
sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding pro...   157   8e-37
gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]    156   2e-36

>dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  160 bits (405), Expect = 1e-37
 Identities = 81/101 (80%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +2

Query: 83  MAASTMALYS-SFTGQAVKPVPFATGVAGNGRVSMRKTXXXXXXXXXXWYGPDRVKYLGP 259
           MAASTMAL S SF GQAVK  P A+ + GNGRVSMRKT          WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 260 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 382
           FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 61  FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/101 (79%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = +2

Query: 83  MAASTMALYS-SFTGQAVKPVPFATGVAGNGRVSMRKTXXXXXXXXXXWYGPDRVKYLGP 259
           MAASTMAL S SF GQAVK  P A  + GNGRVSMRKT          WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 260 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 382
           FSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101


>dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/101 (78%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +2

Query: 83  MAASTMALYS-SFTGQAVKPVPFATGVAGNGRVSMRKTXXXXXXXXXXWYGPDRVKYLGP 259
           MAA+TMAL S SF GQAVK  P A+ + GNGRVSMRKT          WYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 260 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 382
           FSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101


>sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
           AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
           Precursor gi|19823|emb|CAA36957.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 265

 Score =  157 bits (397), Expect = 8e-37
 Identities = 79/101 (78%), Positives = 82/101 (81%), Gaps = 1/101 (0%)
 Frame = +2

Query: 83  MAASTMALYS-SFTGQAVKPVPFATGVAGNGRVSMRKTXXXXXXXXXXWYGPDRVKYLGP 259
           MAA+TMAL S SF GQAVK  P A  + GNGRVSMRKT          WYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 260 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 382
           FSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101


>gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/101 (76%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +2

Query: 83  MAASTMALYS-SFTGQAVKPVPFATGVAGNGRVSMRKTXXXXXXXXXXWYGPDRVKYLGP 259
           MAASTMAL S SF GQAVK  P A+ ++GNGR++MRK           WYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 260 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 382
           FSGE+PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH 101


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