BLASTX nr result

ID: Atractylodes22_contig00002717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002717
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_004146887.1| PREDICTED: 60S ribosomal protein L13-2-like ...   176   2e-42
gb|AAQ96375.1| 60S ribosomal protein L13 [Solanum palustre]           175   3e-42
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...   174   5e-42

>ref|XP_002319032.1| predicted protein [Populus trichocarpa] gi|222857408|gb|EEE94955.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  177 bits (450), Expect = 6e-43
 Identities = 88/99 (88%), Positives = 93/99 (93%)
 Frame = +3

Query: 3   PQVHGQTLKYNMKLREGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNHSLEGLQANVQR 182
           P VHGQTLKYNMK+R GRGFSLEELKAAGIPKKLAPTIGIAVDHRRRN SLEGLQANVQR
Sbjct: 56  PIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQANVQR 115

Query: 183 LKTFKAKLVIFPRRARKMKAGDSTPEELATATQVQGPVL 299
           LKT+KAKLV+FPRRARK KAGDS PEELATATQVQG ++
Sbjct: 116 LKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGQIM 154


>ref|XP_002322840.1| predicted protein [Populus trichocarpa] gi|222867470|gb|EEF04601.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/99 (86%), Positives = 93/99 (93%)
 Frame = +3

Query: 3   PQVHGQTLKYNMKLREGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNHSLEGLQANVQR 182
           P VHGQTLKYNMK+R GRGFSLEELKAAGIPKKLAPTIGIAVDHRR+NHSLEGLQAN+QR
Sbjct: 56  PIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRKNHSLEGLQANIQR 115

Query: 183 LKTFKAKLVIFPRRARKMKAGDSTPEELATATQVQGPVL 299
           LKT+KAKLV+FPR ARK KAGDS PEELATATQVQG ++
Sbjct: 116 LKTYKAKLVVFPRHARKFKAGDSAPEELATATQVQGHIM 154


>ref|XP_004146887.1| PREDICTED: 60S ribosomal protein L13-2-like isoform 1 [Cucumis
           sativus] gi|449458305|ref|XP_004146888.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 2 [Cucumis sativus]
           gi|449513147|ref|XP_004164245.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 1 [Cucumis sativus]
           gi|449513151|ref|XP_004164246.1| PREDICTED: 60S
           ribosomal protein L13-2-like isoform 2 [Cucumis sativus]
          Length = 206

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/99 (87%), Positives = 92/99 (92%)
 Frame = +3

Query: 3   PQVHGQTLKYNMKLREGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNHSLEGLQANVQR 182
           P VHGQTLKYNMK+R GRGFSLEELKAAGIPKKLAPTIGI+VDHRRRN SLE LQANVQR
Sbjct: 55  PVVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLESLQANVQR 114

Query: 183 LKTFKAKLVIFPRRARKMKAGDSTPEELATATQVQGPVL 299
           LKT+KAK+V+FPRRARK KAGDSTPEELA ATQVQGP L
Sbjct: 115 LKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYL 153


>gb|AAQ96375.1| 60S ribosomal protein L13 [Solanum palustre]
          Length = 200

 Score =  175 bits (444), Expect = 3e-42
 Identities = 88/99 (88%), Positives = 93/99 (93%)
 Frame = +3

Query: 3   PQVHGQTLKYNMKLREGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNHSLEGLQANVQR 182
           P VHGQTLKYNMK+R GRGFSLEELKAAGIPKKLAPTIGIAVDHRRRN SLEGLQ NVQR
Sbjct: 55  PIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQR 114

Query: 183 LKTFKAKLVIFPRRARKMKAGDSTPEELATATQVQGPVL 299
           LKT+KAKLVIFPRRA+K+KAGDS+ EELATATQVQGP L
Sbjct: 115 LKTYKAKLVIFPRRAKKVKAGDSSAEELATATQVQGPYL 153


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score =  174 bits (442), Expect = 5e-42
 Identities = 87/96 (90%), Positives = 91/96 (94%)
 Frame = +3

Query: 3   PQVHGQTLKYNMKLREGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNHSLEGLQANVQR 182
           P VHGQTLKYNMKLR GRGF+LEELKAAGIPKKLAPTIGIAVDHRR+N SLEGLQANVQR
Sbjct: 56  PIVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQR 115

Query: 183 LKTFKAKLVIFPRRARKMKAGDSTPEELATATQVQG 290
           LKT+KAKLV+FPRRARK KAGDS PEELATATQVQG
Sbjct: 116 LKTYKAKLVVFPRRARKSKAGDSAPEELATATQVQG 151


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