BLASTX nr result

ID: Atractylodes22_contig00002556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002556
         (762 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    74   1e-14
gb|ABK93470.1| unknown [Populus trichocarpa]                           70   1e-13
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    70   1e-13
emb|CBI17057.3| unnamed protein product [Vitis vinifera]               68   2e-13
gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]    67   2e-13

>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 73.6 bits (179), Expect(2) = 1e-14
 Identities = 46/90 (51%), Positives = 47/90 (52%)
 Frame = -3

Query: 514 NILGSVGAECDDSRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXX 335
           +ILGSVGAE DD RIELLLSEVKGKDITELIASGREKL                      
Sbjct: 25  DILGSVGAEADDDRIELLLSEVKGKDITELIASGREKLASVPSGGGVAVAATAVGGASGG 84

Query: 334 XXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                              SDDDMGFSLFD
Sbjct: 85  GAPAAPEPKKEEKVEEKEESDDDMGFSLFD 114



 Score = 32.3 bits (72), Expect(2) = 1e-14
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 674 MKVVXXXXXXXLGGNTCPSADDLK 603
           MKV+       LGGNTCPSA+DLK
Sbjct: 1   MKVIAAYLLAVLGGNTCPSANDLK 24


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 44/90 (48%), Positives = 46/90 (51%)
 Frame = -3

Query: 514 NILGSVGAECDDSRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXX 335
           +ILGSVGA+ DD RIELLLS VKGKDITELIASGREKL                      
Sbjct: 25  HILGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVAVASGGAPAAASG 84

Query: 334 XXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                              SDDDMGFSLFD
Sbjct: 85  GAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 674 MKVVXXXXXXXLGGNTCPSADDLK 603
           MKVV       LGGNTCP+A+DLK
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLK 24


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 44/90 (48%), Positives = 46/90 (51%)
 Frame = -3

Query: 514 NILGSVGAECDDSRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXX 335
           +ILGSVGA+ DD RIELLLS VKGKDITELIASGREKL                      
Sbjct: 25  HILGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVAVAAGGAPAAASG 84

Query: 334 XXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                              SDDDMGFSLFD
Sbjct: 85  GAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 674 MKVVXXXXXXXLGGNTCPSADDLK 603
           MKVV       LGGNTCP+A+DLK
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLK 24


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score = 68.2 bits (165), Expect(2) = 2e-13
 Identities = 45/90 (50%), Positives = 47/90 (52%)
 Frame = -3

Query: 514 NILGSVGAECDDSRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXX 335
           +ILGSVGAE DD RIELLL+EVKGKDITELIASGREKL                      
Sbjct: 57  DILGSVGAEADDDRIELLLAEVKGKDITELIASGREKL-ASVPSGGGAAVAVAAPGGGGA 115

Query: 334 XXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                              SDDDMGFSLFD
Sbjct: 116 AAPAAAEPKKEEKVEEKEESDDDMGFSLFD 145



 Score = 33.5 bits (75), Expect(2) = 2e-13
 Identities = 15/25 (60%), Positives = 18/25 (72%)
 Frame = -2

Query: 677 RMKVVXXXXXXXLGGNTCPSADDLK 603
           +MKV+       LGGNTCPSA+DLK
Sbjct: 32  KMKVIAAYLLAVLGGNTCPSAEDLK 56


>gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]
          Length = 112

 Score = 67.0 bits (162), Expect(2) = 2e-13
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = -3

Query: 514 NILGSVGAECDDSRIELLLSEVKGKDITELIASGREK 404
           +ILGSVGAE DD RIELLLSEVKGKDITELIASGREK
Sbjct: 25  DILGSVGAEADDDRIELLLSEVKGKDITELIASGREK 61



 Score = 34.7 bits (78), Expect(2) = 2e-13
 Identities = 17/24 (70%), Positives = 17/24 (70%)
 Frame = -2

Query: 674 MKVVXXXXXXXLGGNTCPSADDLK 603
           MKVV       LGGNTCPSADDLK
Sbjct: 1   MKVVAAYLLAVLGGNTCPSADDLK 24


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