BLASTX nr result

ID: Atractylodes22_contig00002542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002542
         (2105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522314.1| conserved hypothetical protein [Ricinus comm...   263   2e-67
ref|XP_002306463.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
emb|CAN74932.1| hypothetical protein VITISV_044432 [Vitis vinifera]   258   3e-66
ref|NP_001240275.1| uncharacterized protein LOC100787318 [Glycin...   250   1e-63
ref|XP_003611785.1| Zinc finger CCCH domain-containing protein [...   244   9e-62

>ref|XP_002522314.1| conserved hypothetical protein [Ricinus communis]
            gi|223538392|gb|EEF39998.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 431

 Score =  263 bits (671), Expect = 2e-67
 Identities = 144/260 (55%), Positives = 181/260 (69%), Gaps = 8/260 (3%)
 Frame = -1

Query: 1052 NQGSNDLQEISLTECKAYLRKHGLRLSATKEECIQRIIEHGRLKAGRGESLYPRSSFSIN 873
            N+G  DL+ +SL E KAYLRKHGLRL+ TK  C++RI  H R+K G GESLYPRSSF  N
Sbjct: 76   NEG-RDLEALSLKEYKAYLRKHGLRLAGTKAVCMERIKNHSRIKDGNGESLYPRSSFVFN 134

Query: 872  CTGDACKGDTVLFTQIEYKKFDKVVRRGDIVVKRTVAGRIVKESYGGSKQQHTFTIEVLW 693
            CTGD CKGD VLFTQ  Y+KFDKV RRG+++ KRTVAGR+VKESYG +KQQHTFT+EVLW
Sbjct: 135  CTGDVCKGDVVLFTQKVYEKFDKVTRRGNLLGKRTVAGRVVKESYGSAKQQHTFTVEVLW 194

Query: 692  SKGPKRLPPLSTLLVKGRNLYGFRTLRQPWNNEAERSEVLQEKHKRGKAARNKRKLKKT- 516
            SKG K+L PL  LLVKGRNLY  +T RQPWNNEAER +VL EKHKRG AAR  R +KK+ 
Sbjct: 195  SKGVKKLHPLFPLLVKGRNLYKLKTFRQPWNNEAERPKVLAEKHKRGTAARLVRAMKKSK 254

Query: 515  -EIASNNDK--GTKRQKLS-HGEPSRSKQSTQTDKQK--SAKKRDAGLLNESTTAHKRNA 354
             E+++   +  G KRQK S H   S++ +  +T  ++  S  K+D          H +  
Sbjct: 255  KEVSATGRRSGGAKRQKCSRHLILSQTIKMDETGNRQHGSGHKKDTSRQYAQVFNHNKKV 314

Query: 353  LEFQKTESKRS-QATFGADP 297
               ++  SKR+ ++  G+ P
Sbjct: 315  PPARQLNSKRNIRSDVGSKP 334


>ref|XP_002306463.1| predicted protein [Populus trichocarpa] gi|222855912|gb|EEE93459.1|
            predicted protein [Populus trichocarpa]
          Length = 399

 Score =  258 bits (660), Expect = 3e-66
 Identities = 138/251 (54%), Positives = 170/251 (67%), Gaps = 3/251 (1%)
 Frame = -1

Query: 1094 EEVGNRIYQVVEQRNQGSNDLQEISLTECKAYLRKHGLRLSATKEECIQRIIEHGRLKAG 915
            E V  R+  ++ +     N+L+ + L  CKAYLR +GLRL+ TK  CIQRI EH RLK  
Sbjct: 58   ESVCERVISLLRE----GNELEGLYLKHCKAYLRHYGLRLAGTKAVCIQRIKEHWRLKDE 113

Query: 914  RGESLYPRSSFSINCTGDACKGDTVLFTQIEYKKFDKVVRRGDIVVKRTVAGRIVKESYG 735
             GE LYPRSSF INC GD CKGD V+F Q  Y KF+KV R G I+ +RTVAGR+VKESYG
Sbjct: 114  NGEELYPRSSFLINCRGDVCKGDVVMFVQKVYSKFNKVTRHGKILGRRTVAGRVVKESYG 173

Query: 734  GSKQQHTFTIEVLWSKGPKRLPPLSTLLVKGRNLYGFRTLRQPWNNEAERSEVLQEKHKR 555
             +KQQHTFT+EVLWSKG K+LPPLS LLVKGRNLY  RT RQ W NEAER +VL EKHKR
Sbjct: 174  SAKQQHTFTVEVLWSKGVKKLPPLSPLLVKGRNLYKLRTFRQCWINEAERQKVLAEKHKR 233

Query: 554  GKAARNKRKLKKTEIA-SNNDKGTKRQKLSHGEPSRSKQSTQTDKQK--SAKKRDAGLLN 384
            G AAR  R +KK+ +A S N      ++  H  PS+ ++ T+ +K+K     +RD   L 
Sbjct: 234  GTAARLMRTMKKSAMAWSENGDAKCHKRAHHRRPSQMRKMTELEKRKRIDGCRRDTLQLP 293

Query: 383  ESTTAHKRNAL 351
            E+   H + AL
Sbjct: 294  ETFKNHHQQAL 304


>emb|CAN74932.1| hypothetical protein VITISV_044432 [Vitis vinifera]
          Length = 486

 Score =  258 bits (660), Expect = 3e-66
 Identities = 129/211 (61%), Positives = 161/211 (76%), Gaps = 3/211 (1%)
 Frame = -1

Query: 1040 NDLQEISLTECKAYLRKHGLRLSATKEECIQRIIEHGRLKAGRGESLYPRSSFSINCTGD 861
            +D++E+ L ECK YLRKHGLR++ TKE CI+RI EH R+K G GE LYP+SSF +NCTGD
Sbjct: 112  SDIKELKLKECKVYLRKHGLRITGTKEVCIERIKEHWRIKDGNGEVLYPKSSFFVNCTGD 171

Query: 860  ACKGDTVLFTQIEYKKFDKVVRRGDIVVKRTVAGRIVKESYGGSKQQHTFTIEVLWSKGP 681
             CKGD VLFTQ  Y KFDKV R G ++ KRT+AGRIVKESYG +KQQHTFT+EVLWSKG 
Sbjct: 172  VCKGDVVLFTQKVYAKFDKVKRNGKLLGKRTIAGRIVKESYGAAKQQHTFTVEVLWSKGI 231

Query: 680  KRLPPLSTLLVKGRNLYGFRTLRQPWNNEAERSEVLQEKHKRGKAA---RNKRKLKKTEI 510
            K+LPPL  LLVKGRNLY  +T RQ W NEAER +VL EKHKRG AA   R+K+K KK ++
Sbjct: 232  KKLPPLFPLLVKGRNLYKLKTFRQRWKNEAERLQVLAEKHKRGAAARLVRSKKKAKK-KL 290

Query: 509  ASNNDKGTKRQKLSHGEPSRSKQSTQTDKQK 417
            +SN  +G ++    H +P++ ++ T + K K
Sbjct: 291  SSNGGEGYQKH-FHHTKPAQVRRRTTSGKGK 320


>ref|NP_001240275.1| uncharacterized protein LOC100787318 [Glycine max]
            gi|255648226|gb|ACU24566.1| unknown [Glycine max]
          Length = 390

 Score =  250 bits (638), Expect = 1e-63
 Identities = 140/285 (49%), Positives = 183/285 (64%), Gaps = 6/285 (2%)
 Frame = -1

Query: 1037 DLQEISLTECKAYLRKHGLRLSATKEECIQRIIEHGRLKAGRGESLYPRSSFSINCTGDA 858
            D++ + L ECKAYLR HGLR++  ++ C+ RI EH RLK G G +LYPRSSF+INCTGD 
Sbjct: 52   DIESLKLNECKAYLRNHGLRIAGNRDVCVARIKEHWRLKHGSGYTLYPRSSFTINCTGDV 111

Query: 857  CKGDTVLFTQIEYKKFDKVVRRGDIVVKRTVAGRIVKESYGGSKQQHTFTIEVLWSKGPK 678
            C GD VLF Q  Y+KFDKV R G  +  RTVAGR+VKESYG +KQQHTFT+EVLWS G +
Sbjct: 112  CMGDVVLFRQKVYEKFDKVTRHGKTLGNRTVAGRVVKESYGAAKQQHTFTVEVLWSSGVR 171

Query: 677  RLPPLSTLLVKGRNLYGFRTLRQPWNNEAERSEVLQEKHKRGKAARNKRKLKKTEIA--S 504
            +LPPLS LLVKGRNLY  +T RQ W NEA+R EVL+EKH RG AAR+ R LK+   +  +
Sbjct: 172  KLPPLSPLLVKGRNLYKQKTYRQRWKNEADRIEVLREKHGRGAAARSIRSLKRKNKSCYA 231

Query: 503  NNDKGTKRQKLSH-GEPSRSKQSTQTDK---QKSAKKRDAGLLNESTTAHKRNALEFQKT 336
            N  KG+KRQ   H  + S+  +S   DK   Q  +K+ +     E T++ +  A + +K 
Sbjct: 232  NESKGSKRQHEIHTKKQSKIGRSNVVDKVRHQDGSKRANNFQPREVTSSSQ--ATQKEKA 289

Query: 335  ESKRSQATFGADPNPQKASSSLPDNRTFLPNLHLQRFPPYSHYNN 201
             S+ S+ T G         +S   +R  +P   L  +P Y+   N
Sbjct: 290  SSRASRYTRG-------RHNSAEFDRYQVPVYPLHNYPQYTPSRN 327


>ref|XP_003611785.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355513120|gb|AES94743.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 447

 Score =  244 bits (622), Expect = 9e-62
 Identities = 144/312 (46%), Positives = 183/312 (58%), Gaps = 34/312 (10%)
 Frame = -1

Query: 1049 QGSNDLQEISLTECKAYLRKHGLRLSATKEECIQRIIEHGRLKAGRGESLYPRSSFSINC 870
            QG  D+  + L ECKAYLRKHGLRL+  +  CI RI EH RLK G G +LYPRSSF+INC
Sbjct: 81   QGGKDIDSLKLNECKAYLRKHGLRLTGNRAVCIARIKEHWRLKHGSGYTLYPRSSFNINC 140

Query: 869  TGDACKGDTVLFTQIEYKKFDKVVRRGDIVVKRTVAGRIVKESYGGSKQQHTFTIEVLWS 690
            TGD C GD VLF Q  Y+KF K  R G +   RTVAGR+VKESYG +KQQHTFT+EVLWS
Sbjct: 141  TGDVCMGDVVLFRQKVYEKFSKGARHGRVRGSRTVAGRVVKESYGAAKQQHTFTVEVLWS 200

Query: 689  KGPKRLPPLSTLLVKGRNLYGFRTLRQPWNNEAERSEVLQEKHKRGKAARNKRKL--KKT 516
             G ++LPPL+ LLVKGRNLY  +T RQ W NEA+R +VL EKH+RG AAR  R L  KK 
Sbjct: 201  SGVRKLPPLTPLLVKGRNLYKMKTYRQKWKNEADRVKVLSEKHRRGAAARFVRGLRQKKK 260

Query: 515  EIASNNDKGTKRQ-KLSHGEPSRSKQSTQTDK--------------QKSAKKRDAGLLNE 381
               +N  KG+KRQ ++ + + S+  +S   +K               + AK       NE
Sbjct: 261  TCNANGSKGSKRQHEIQNTKQSKKGRSGDINKVRHLDGSRRADEYQHQVAKSSTQATWNE 320

Query: 380  STTAHKRNALEFQKTESKRSQATFGADPNPQKASS--------------SLPDNRTFL-- 249
            ST++    +   +  ES      + A   P +ASS              S P+   +   
Sbjct: 321  STSSRAFRSARGRVHESAEFD-RYQAPAYPLQASSQQIPYQYHVHAQSRSGPNEFVYHGR 379

Query: 248  -PNLHLQRFPPY 216
             PN +++ FPPY
Sbjct: 380  GPNPNMRGFPPY 391


Top