BLASTX nr result

ID: Atractylodes22_contig00002362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00002362
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF15448.1| dehydrin 1 [Cichorium intybus]                          81   4e-13
gb|ABA27060.1| TO101-3 [Taraxacum officinale]                          65   2e-08
gb|AAF01465.2|AF190474_1 bdn1 [Paraboea crassifolia]                   57   6e-06
ref|XP_003570058.1| PREDICTED: dehydrin COR410-like [Brachypodiu...    56   9e-06

>gb|ACF15448.1| dehydrin 1 [Cichorium intybus]
          Length = 262

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 61/178 (34%), Positives = 73/178 (41%)
 Frame = +3

Query: 132 TDEVVYHDAPKTQDYGQXXXXXXXXXXXXKKDRGLFDFFGXXXXXXXXXDAAISSEFEQK 311
           +DE VYH+APKT+ Y                DRGLFD+FG         + AISSEFE+K
Sbjct: 2   SDEGVYHNAPKTEVYVDATTTAEPESVETT-DRGLFDYFGKKDEEKKCEETAISSEFEEK 60

Query: 312 VHVTXXXXXXXXXXXXXXXTLLQKMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 491
           V V+               TL +K+H                                  
Sbjct: 61  VQVSEPAPEEKKE------TLFEKLHRSDSSSSSSDEECDENGEKKKKKKPLKEKIKEKI 114

Query: 492 XXXXXXXXXXXXXXVADNTSVPIEKYEEVPPISHPTPPEEKKGFMEKIKEKLPGGHKK 665
                           ++TSVPIEKYE  P    PT   EKKGF+EKIKEKLPGG KK
Sbjct: 115 EGHTEKKEE-------EDTSVPIEKYEVTPLQHGPTSEPEKKGFIEKIKEKLPGGTKK 165


>gb|ABA27060.1| TO101-3 [Taraxacum officinale]
          Length = 107

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 32/43 (74%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = +3

Query: 540 DNTSVPIEKYEEVPPISHPTP-PEEKKGFMEKIKEKLPGGHKK 665
           D TSVPIEKY+  P    P P PEEKKGFMEKIKEKLPGGHK+
Sbjct: 33  DETSVPIEKYDVAPLHHTPNPEPEEKKGFMEKIKEKLPGGHKE 75


>gb|AAF01465.2|AF190474_1 bdn1 [Paraboea crassifolia]
          Length = 252

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = +3

Query: 540 DNTSVPIEKYEEVPPISHPTPPEEKKGFMEKIKEKLPGGHK 662
           + TSVP+EKY+E+    H   PEEKKGF++KIKEKLPGG K
Sbjct: 156 EETSVPVEKYDEI----HTLEPEEKKGFLDKIKEKLPGGKK 192


>ref|XP_003570058.1| PREDICTED: dehydrin COR410-like [Brachypodium distachyon]
          Length = 254

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 540 DNTSVPIEKYEEVPPISHPTPPEEKKGFMEKIKEKLPGGHKK 665
           D+ +V +EK +EV   +   P EEKKGF+EKIKEKLPGGHKK
Sbjct: 145 DDGAVAVEKIDEVKTEAPVAPEEEKKGFLEKIKEKLPGGHKK 186


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