BLASTX nr result

ID: Atractylodes22_contig00001806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00001806
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   485   e-134
ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   471   e-130
ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|2...   466   e-129
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]   462   e-127
ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   452   e-124

>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  485 bits (1248), Expect = e-134
 Identities = 242/360 (67%), Positives = 273/360 (75%), Gaps = 5/360 (1%)
 Frame = +2

Query: 35   MAEMSTET-TTAPLLRPRQAAGELQSAGGARPTTLALLLGRASGRHGASMLVRETAARQL 211
            M+E ST T TTAPLLRPRQ   E      ARPTTLALL+GRA+GR G SMLVRETAAR+L
Sbjct: 1945 MSETSTTTGTTAPLLRPRQGTAEQS----ARPTTLALLMGRATGRRGPSMLVRETAAREL 2000

Query: 212  EERRADWGYSKPVVALDMTWNLAFVAVSVVLLICTLEEKPNVPIRVWICGYALQCALHVV 391
            EERRADWGYSKPVVALDM WN++FV VS+V+LICT  E+PN PIR+WICGYALQC +HVV
Sbjct: 2001 EERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVV 2060

Query: 392  LVWLEYRRRNRRVQEDE----TTGGXXXXXXXXXXXXGRIGAFLTSNRVSYTKRCENLNT 559
            LVWLEYRRRNRR   DE                    G   A    N+ S TKRCE++NT
Sbjct: 2061 LVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNT 2120

Query: 560  MVSFVWWLVGFYWMVSGGEILLHNAPRLYWLTVVFLAFDVFFAIFCVVXXXXXXXXXXXX 739
            M SF+WW+VGFYW+VSGGE LL NAPRLYWL VVFLAFDVFFAIFCVV            
Sbjct: 2121 MASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 2180

Query: 740  XXXXXXXXYAVAGQEGASEADLSALPKYRFQVSNDEEKPDVGAGRMVPIESNVGYLAVER 919
                    YAVAGQEGASEADLS LP+YRF+ +N+EEK  VGAG M+P E++ GYLA ER
Sbjct: 2181 LPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSGVGAGTMIPTETSSGYLANER 2239

Query: 920  VLLPEDADCCICLSPYEDGTEIHSLPCNHHFHATCIVKWLKMNATCPLCKYNILKGNEQV 1099
            +LLPEDA+CCICLS YEDG E+H+LPCNHHFH+TCI KWLKMNATCPLCKYNILKG+EQ+
Sbjct: 2240 ILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299


>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  471 bits (1211), Expect = e-130
 Identities = 238/373 (63%), Positives = 271/373 (72%), Gaps = 21/373 (5%)
 Frame = +2

Query: 44   MSTETTT-------APLLRPRQAAGELQSAGGARPTTLALLLGRASGRHGASMLVRETAA 202
            MST  TT       APLL PRQ A         R  +LA+LLGR +GR G SMLVRETAA
Sbjct: 599  MSTTATTTAESESHAPLLHPRQEA--------PRAASLAMLLGRVTGRRGPSMLVRETAA 650

Query: 203  RQLEERRADWGYSKPVVALDMTWNLAFVAVSVVLLICTLEEKPNVPIRVWICGYALQCAL 382
             +LEERRADWGYSKPVVALDM WN AFV VS+ +LI +++EKPN PIR+WICGYALQC +
Sbjct: 651  LELEERRADWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICGYALQCLV 710

Query: 383  HVVLVWLEYRRRN-RRVQEDETTGGXXXXXXXXXXXXGRIG-------------AFLTSN 520
            HVVLVW+EYRRRN RRV+++E                   G             A +TSN
Sbjct: 711  HVVLVWIEYRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSN 770

Query: 521  RVSYTKRCENLNTMVSFVWWLVGFYWMVSGGEILLHNAPRLYWLTVVFLAFDVFFAIFCV 700
            R S  KRCE++NTM SF+WW+VGFYW+VSGG+ LL NAP LYWL VVFLAFDVFFAIFCV
Sbjct: 771  RSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCV 830

Query: 701  VXXXXXXXXXXXXXXXXXXXXYAVAGQEGASEADLSALPKYRFQVSNDEEKPDVGAGRMV 880
            V                    YAVAGQEGASEADLS LPKYRFQ++ +EEKP VGAG+MV
Sbjct: 831  VLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMV 890

Query: 881  PIESNVGYLAVERVLLPEDADCCICLSPYEDGTEIHSLPCNHHFHATCIVKWLKMNATCP 1060
            PIE++ GYLA ER+LLPEDA+CCICL PYEDG E+H+LPCNHHFH+TCIVKWLKMNATCP
Sbjct: 891  PIETSSGYLANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCP 950

Query: 1061 LCKYNILKGNEQV 1099
            LCKYNILKGNEQV
Sbjct: 951  LCKYNILKGNEQV 963


>ref|XP_002312464.1| predicted protein [Populus trichocarpa] gi|222852284|gb|EEE89831.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  466 bits (1198), Expect = e-129
 Identities = 229/353 (64%), Positives = 268/353 (75%), Gaps = 2/353 (0%)
 Frame = +2

Query: 44   MSTETTT-APLLRPRQAAGELQSAGGARPTTLALLLGRASGRHGASMLVRETAARQLEER 220
            MSTE    APLLRPRQ   +  ++  +R TTL+ LLGRA+GR G SMLVRETAAR+L+ER
Sbjct: 1    MSTENEPHAPLLRPRQ---DPPTSPTSRQTTLSALLGRATGRRGPSMLVRETAARELDER 57

Query: 221  RADWGYSKPVVALDMTWNLAFVAVSVVLLICTLEEKPNVPIRVWICGYALQCALHVVLVW 400
            RADWGYSKPVV+LDM WN AFV VSV +L+ T++E+PN PIR+WICGYALQC +HVVLVW
Sbjct: 58   RADWGYSKPVVSLDMMWNAAFVVVSVTMLLVTVKERPNTPIRIWICGYALQCLVHVVLVW 117

Query: 401  LEYRRRNRRVQED-ETTGGXXXXXXXXXXXXGRIGAFLTSNRVSYTKRCENLNTMVSFVW 577
            LEYRRRN R + D E+                   A   S R S TKRCE++NTMVSF+W
Sbjct: 118  LEYRRRNTRRERDIESQQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLW 177

Query: 578  WLVGFYWMVSGGEILLHNAPRLYWLTVVFLAFDVFFAIFCVVXXXXXXXXXXXXXXXXXX 757
            W+VGFYW+VSGG++LL NAP LYWL VVFLAFDVFFAIFCVV                  
Sbjct: 178  WMVGFYWVVSGGDVLLQNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIA 237

Query: 758  XXYAVAGQEGASEADLSALPKYRFQVSNDEEKPDVGAGRMVPIESNVGYLAVERVLLPED 937
              YAVAGQEGASEADL  LPKY+FQ+  +EEKP + AG+MVP+E++  +L  ER+LLPED
Sbjct: 238  ILYAVAGQEGASEADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFLGTERILLPED 297

Query: 938  ADCCICLSPYEDGTEIHSLPCNHHFHATCIVKWLKMNATCPLCKYNILKGNEQ 1096
            A+CCICLSPYEDG E+H+LPCNHHFHATCIVKWLKMNATCPLCK+NILKGNEQ
Sbjct: 298  AECCICLSPYEDGAELHALPCNHHFHATCIVKWLKMNATCPLCKFNILKGNEQ 350


>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
          Length = 361

 Score =  462 bits (1188), Expect = e-127
 Identities = 232/349 (66%), Positives = 261/349 (74%), Gaps = 5/349 (1%)
 Frame = +2

Query: 35   MAEMSTET-TTAPLLRPRQAAGELQSAGGARPTTLALLLGRASGRHGASMLVRETAARQL 211
            M+E ST T TTAPLLRPRQ   E      ARPTTLALL+GRA+GR G SMLVRETAAR+L
Sbjct: 1    MSETSTTTGTTAPLLRPRQGTAEQS----ARPTTLALLMGRATGRRGPSMLVRETAAREL 56

Query: 212  EERRADWGYSKPVVALDMTWNLAFVAVSVVLLICTLEEKPNVPIRVWICGYALQCALHVV 391
            EERRADWGYSKPVVALDM WN++FV VS+V+LICT  E+PN PIR+WICGYALQC +HVV
Sbjct: 57   EERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVV 116

Query: 392  LVWLEYRRRNRRVQEDE----TTGGXXXXXXXXXXXXGRIGAFLTSNRVSYTKRCENLNT 559
            LVWLEYRRR+RR   DE                    G   A    N+ S TKRCE++NT
Sbjct: 117  LVWLEYRRRSRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNT 176

Query: 560  MVSFVWWLVGFYWMVSGGEILLHNAPRLYWLTVVFLAFDVFFAIFCVVXXXXXXXXXXXX 739
            M SF+WW+VGFYW+VSGGE LL NAPRLYWL VVFLAFDVFFAIFCVV            
Sbjct: 177  MASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCC 236

Query: 740  XXXXXXXXYAVAGQEGASEADLSALPKYRFQVSNDEEKPDVGAGRMVPIESNVGYLAVER 919
                    YAVAGQEGASEADLS LP+YRF+ +N+EEK  VGAG M P E++ GYLA ER
Sbjct: 237  LPCIIAILYAVAGQEGASEADLSMLPRYRFE-ANNEEKSGVGAGTMFPTETSSGYLANER 295

Query: 920  VLLPEDADCCICLSPYEDGTEIHSLPCNHHFHATCIVKWLKMNATCPLC 1066
            +LLPEDA+CCICLS YEDG E+H+LPCNHHFH+TCI KWLKMNATCPLC
Sbjct: 296  ILLPEDAECCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLC 344


>ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
          Length = 352

 Score =  452 bits (1162), Expect = e-124
 Identities = 232/364 (63%), Positives = 261/364 (71%), Gaps = 10/364 (2%)
 Frame = +2

Query: 38   AEMSTETTTAPLLRPRQAAGELQSAGGARPTTLALLLGRASGRHGASMLVRETAARQLEE 217
            A M    + APLLRP      L  A  A   TLALLLGRA GR G SMLVRETAAR+LEE
Sbjct: 7    ASMEAPESHAPLLRP------LTDASRAPVPTLALLLGRA-GRRGPSMLVRETAARELEE 59

Query: 218  RRADWGYSKPVVALDMTWNLAFVAVSVVLLICTLEEKPNVPIRVWICGYALQCALHVVLV 397
            RRADWGYSKPVVALDM+WN+AFV V+ V+L CT  E+PN PIRVWI GYALQC +HV+LV
Sbjct: 60   RRADWGYSKPVVALDMSWNMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLV 119

Query: 398  WLEYRRRNRR----------VQEDETTGGXXXXXXXXXXXXGRIGAFLTSNRVSYTKRCE 547
            WLEYRRR+RR          V+ D  +G                     S+  S+TKRCE
Sbjct: 120  WLEYRRRSRRDSHHGQRARDVESDAGSGDEDYSDDRDW-----------SSGYSFTKRCE 168

Query: 548  NLNTMVSFVWWLVGFYWMVSGGEILLHNAPRLYWLTVVFLAFDVFFAIFCVVXXXXXXXX 727
             LNT VSF+WW+VGFYW+VSGG ILL +APRLYWL VVFLAFDVFFAIFCVV        
Sbjct: 169  LLNTGVSFLWWIVGFYWVVSGGNILLQDAPRLYWLVVVFLAFDVFFAIFCVVLACLIGIA 228

Query: 728  XXXXXXXXXXXXYAVAGQEGASEADLSALPKYRFQVSNDEEKPDVGAGRMVPIESNVGYL 907
                        YAVAGQEGASEADLS LPKYRF++ +DE+KP  GAG MVPIE++  YL
Sbjct: 229  LCCCLPCIIAILYAVAGQEGASEADLSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYL 288

Query: 908  AVERVLLPEDADCCICLSPYEDGTEIHSLPCNHHFHATCIVKWLKMNATCPLCKYNILKG 1087
            A ER LLPEDA+CCICL  YEDG E+H+LPCNHHFH++CIVKWLKMNATCPLCKYNILKG
Sbjct: 289  ANERTLLPEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKG 348

Query: 1088 NEQV 1099
            NEQV
Sbjct: 349  NEQV 352


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