BLASTX nr result

ID: Atractylodes21_contig00055110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00055110
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94767.2| retrotransposon protein, putative, unclassified [...    81   3e-22
ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [S...    80   2e-20
ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [S...    90   2e-16
ref|XP_002457887.1| hypothetical protein SORBIDRAFT_03g018791 [S...    89   3e-16
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ...    89   4e-16

>gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2446

 Score = 80.9 bits (198), Expect(2) = 3e-22
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = +3

Query: 117  PVSDPTLHRNIADALQYSTFTRPGLKYGVQQVCLFMHAP*EPHLTAIKRIIRYVKGT 287
            PV+DP+ +R+IA  LQY T  RP L Y VQQVCLFMH P EPHL  +KRI+RYVKG+
Sbjct: 852  PVADPSEYRSIAGTLQYLTLIRPDLTYAVQQVCLFMHDPREPHLALVKRILRYVKGS 908



 Score = 48.9 bits (115), Expect(2) = 3e-22
 Identities = 22/39 (56%), Positives = 29/39 (74%)
 Frame = +1

Query: 1   FLLQRQYVEDILRRAKMDNCKTVATPVDTKSKFSANHGI 117
           FL QRQYV D+L+RA M  C + +TPVDT++K SA  G+
Sbjct: 813 FLSQRQYVVDLLQRAGMAECHSTSTPVDTRAKLSATDGL 851


>ref|XP_002444548.1| hypothetical protein SORBIDRAFT_07g023610 [Sorghum bicolor]
           gi|241940898|gb|EES14043.1| hypothetical protein
           SORBIDRAFT_07g023610 [Sorghum bicolor]
          Length = 791

 Score = 79.7 bits (195), Expect(2) = 2e-20
 Identities = 34/54 (62%), Positives = 45/54 (83%)
 Frame = +3

Query: 126 DPTLHRNIADALQYSTFTRPGLKYGVQQVCLFMHAP*EPHLTAIKRIIRYVKGT 287
           D T +R++A ALQY TFTRP + Y VQQ+CL+MHAP EPHL A+KR++RY++GT
Sbjct: 569 DSTAYRSLAGALQYLTFTRPDITYAVQQLCLYMHAPREPHLAAMKRLLRYLRGT 622



 Score = 43.9 bits (102), Expect(2) = 2e-20
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +1

Query: 1   FLLQRQYVEDILRRAKMDNCKTVATPVDTKSKFSANHG 114
           FL QRQ+  DIL RA M +CK+ +TPVDT+ K S   G
Sbjct: 525 FLHQRQFTCDILERAGMTDCKSCSTPVDTQGKLSEAEG 562


>ref|XP_002453623.1| hypothetical protein SORBIDRAFT_04g009135 [Sorghum bicolor]
           gi|241933454|gb|EES06599.1| hypothetical protein
           SORBIDRAFT_04g009135 [Sorghum bicolor]
          Length = 801

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/74 (56%), Positives = 53/74 (71%)
 Frame = +3

Query: 66  CCYPCRHQVKVQR*PWDPVSDPTLHRNIADALQYSTFTRPGLKYGVQQVCLFMHAP*EPH 245
           C  P   Q K+      PV+DPT +R++A ALQY TFTRP + Y VQQVCL MH P EPH
Sbjct: 559 CPTPVDTQGKLSEAEGSPVADPTAYRSLAGALQYLTFTRPDITYAVQQVCLHMHDPREPH 618

Query: 246 LTAIKRIIRYVKGT 287
           LTA+KR++RY++GT
Sbjct: 619 LTALKRLLRYLRGT 632


>ref|XP_002457887.1| hypothetical protein SORBIDRAFT_03g018791 [Sorghum bicolor]
           gi|241929862|gb|EES03007.1| hypothetical protein
           SORBIDRAFT_03g018791 [Sorghum bicolor]
          Length = 683

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/74 (55%), Positives = 52/74 (70%)
 Frame = +3

Query: 66  CCYPCRHQVKVQR*PWDPVSDPTLHRNIADALQYSTFTRPGLKYGVQQVCLFMHAP*EPH 245
           C  P   Q K+      PV+DPT +R++A ALQY TFTRP + Y VQQ+CL MH P EPH
Sbjct: 460 CSTPLDTQGKISEAEGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHMHDPREPH 519

Query: 246 LTAIKRIIRYVKGT 287
           LTA+KRI+ Y++GT
Sbjct: 520 LTALKRILHYLRGT 533


>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
            gi|241947124|gb|EES20269.1| hypothetical protein
            SORBIDRAFT_0139s002040 [Sorghum bicolor]
          Length = 1822

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/74 (55%), Positives = 53/74 (71%)
 Frame = +3

Query: 66   CCYPCRHQVKVQR*PWDPVSDPTLHRNIADALQYSTFTRPGLKYGVQQVCLFMHAP*EPH 245
            C  P   Q K+      PV+DPT +R++A ALQY TFTRP + Y VQQ+CL MH P EPH
Sbjct: 1579 CSTPVDTQGKLSEAEGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHMHDPREPH 1638

Query: 246  LTAIKRIIRYVKGT 287
            LTA+KRI+RY++G+
Sbjct: 1639 LTALKRILRYLRGS 1652


Top