BLASTX nr result

ID: Atractylodes21_contig00055060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00055060
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polypro...    65   7e-09
gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprot...    65   7e-09
emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    64   1e-08
ref|XP_003600463.1| hypothetical protein MTR_3g061470 [Medicago ...    60   2e-07

>dbj|BAF01788.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 127

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +1

Query: 10  RKYGPYKILHKINDNAYVIDLRGTIMSISKTFNIADIYKYYPSDETIYLENMRSSSYQV 186
           RKYGP+K+L KINDNAYV+ L  + M+IS TFN+ADI++Y+        EN+R+SS +V
Sbjct: 62  RKYGPFKVLRKINDNAYVVALPKS-MNISNTFNVADIHEYHADGVLYPEENLRTSSSEV 119


>gb|AAD19756.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 280

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/59 (54%), Positives = 44/59 (74%)
 Frame = +1

Query: 10  RKYGPYKILHKINDNAYVIDLRGTIMSISKTFNIADIYKYYPSDETIYLENMRSSSYQV 186
           RKYGP+K+L KINDNAYV+ L  + M+IS TFN+ADI++Y+        EN+R+SS +V
Sbjct: 215 RKYGPFKVLRKINDNAYVVALPKS-MNISNTFNVADIHEYHADGVLYPEENLRTSSSEV 272


>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +1

Query: 13  KYGPYKILHKINDNAYVIDLRGTIMSISKTFNIADIYKYYPSDE-TIYLENMRSSSYQVR 189
           K GP+++L KI DNAY IDL   I +IS TFN+ D+++Y+PSDE ++  +N+R S  QV 
Sbjct: 799 KIGPFRVLQKIGDNAYKIDLLADI-NISNTFNVVDVFEYFPSDEFSLQPQNLRMSFLQVE 857

Query: 190 GM 195
           G+
Sbjct: 858 GI 859


>ref|XP_003600463.1| hypothetical protein MTR_3g061470 [Medicago truncatula]
           gi|355489511|gb|AES70714.1| hypothetical protein
           MTR_3g061470 [Medicago truncatula]
          Length = 133

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/51 (54%), Positives = 40/51 (78%)
 Frame = +1

Query: 13  KYGPYKILHKINDNAYVIDLRGTIMSISKTFNIADIYKYYPSDETIYLENM 165
           KYGP+K+  KINDNAYV+ L  + M+IS TFN+ADIY+Y+ +DE +Y + +
Sbjct: 80  KYGPFKVTRKINDNAYVVALLES-MNISNTFNVADIYEYH-ADEVLYRDEL 128


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