BLASTX nr result

ID: Atractylodes21_contig00055039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00055039
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]    85   7e-15
ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15...    85   7e-15
ref|XP_003597886.1| Polygalacturonase [Medicago truncatula] gi|3...    85   7e-15
ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15...    84   2e-14
ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15...    76   3e-12

>gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]
          Length = 392

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 FLCVG--FSNTKTSAVRLSDISYSGIAGTSSMDKVINLSCSESVACTNITMDRVYISSAT 54
           F CV        T A+++SD++Y GI+GTS  DK INL+C ++V C+N+  DRVY+ SA 
Sbjct: 305 FYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAV 364

Query: 53  PGRKVFGSCINAHGRVS 3
           P  KVF  C NAHGR S
Sbjct: 365 PKMKVFSFCHNAHGRAS 381


>ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 401

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 36/63 (57%), Positives = 48/63 (76%)
 Frame = -3

Query: 200 KTSAVRLSDISYSGIAGTSSMDKVINLSCSESVACTNITMDRVYISSATPGRKVFGSCIN 21
           +T A+++SD++Y GI GTS  DK INLSC ++V C+NI +D VYI+ A PG+KVF  C N
Sbjct: 325 QTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDHVYITPAVPGQKVFSYCHN 384

Query: 20  AHG 12
           AHG
Sbjct: 385 AHG 387


>ref|XP_003597886.1| Polygalacturonase [Medicago truncatula] gi|355486934|gb|AES68137.1|
           Polygalacturonase [Medicago truncatula]
          Length = 404

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 FLCVG--FSNTKTSAVRLSDISYSGIAGTSSMDKVINLSCSESVACTNITMDRVYISSAT 54
           F CV        T A+++SD++Y GI+GTS  DK INL+C ++V C+N+  DRVY+ SA 
Sbjct: 317 FYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNLVFDRVYVRSAV 376

Query: 53  PGRKVFGSCINAHGRVS 3
           P  KVF  C NAHGR S
Sbjct: 377 PKMKVFSFCHNAHGRAS 393


>ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 422

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/63 (55%), Positives = 48/63 (76%)
 Frame = -3

Query: 200 KTSAVRLSDISYSGIAGTSSMDKVINLSCSESVACTNITMDRVYISSATPGRKVFGSCIN 21
           +T A+++SD++Y GI GTS  DK INLSC ++V C+NI +D VYI+ + PG+KVF  C N
Sbjct: 346 QTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDHVYITPSVPGQKVFSYCHN 405

Query: 20  AHG 12
           AHG
Sbjct: 406 AHG 408


>ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
           vinifera]
          Length = 366

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = -3

Query: 203 TKTSAVRLSDISYSGIAGTSSMDKVINLSCSESVACTNITMDRVYISSATPGRKVFGSCI 24
           T TSAV++SD+S++G  GTS+ D  I LSCSE+V CTNI++D + I  A+     + SCI
Sbjct: 289 TTTSAVQISDVSFTGFLGTSATDNAIKLSCSETVGCTNISLDYINIKLASGNGNTYSSCI 348

Query: 23  NAHG 12
           NAHG
Sbjct: 349 NAHG 352


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