BLASTX nr result

ID: Atractylodes21_contig00055036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00055036
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA02271.1| reverse transcriptase [Glycine max]                    60   1e-07
gb|AEQ66864.1| reverse transcriptase [Coffea arabica]                  60   2e-07
gb|AAT90475.1| reverse transcriptase [Vigna radiata]                   58   7e-07
gb|AAT90442.1| reverse transcriptase [Vigna radiata]                   58   7e-07
gb|AEQ66862.1| reverse transcriptase [Coffea canephora]                57   1e-06

>dbj|BAA02271.1| reverse transcriptase [Glycine max]
          Length = 81

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +2

Query: 5   SPQWYGKFHQVITSYDFEVNVVDDCVYHKF 94
           S QWY KFHQVITSY FE NVVDDCVYHKF
Sbjct: 42  SRQWYYKFHQVITSYGFEANVVDDCVYHKF 71


>gb|AEQ66864.1| reverse transcriptase [Coffea arabica]
          Length = 98

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +2

Query: 2   ASPQWYGKFHQVITSYDFEVNVVDDCVYHKF 94
           AS QWY KFHQVI S+DFE+N+VDDC+YHKF
Sbjct: 50  ASRQWYFKFHQVIISFDFEMNLVDDCIYHKF 80


>gb|AAT90475.1| reverse transcriptase [Vigna radiata]
          Length = 92

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   ASPQWYGKFHQVITSYDFEVNVVDDCVYHKF 94
           AS QWY KFHQVI S+ FE+NVV+DCVYHKF
Sbjct: 47  ASRQWYHKFHQVIISFGFEINVVEDCVYHKF 77


>gb|AAT90442.1| reverse transcriptase [Vigna radiata]
          Length = 92

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +2

Query: 2   ASPQWYGKFHQVITSYDFEVNVVDDCVYHKF 94
           AS QWY KFHQVI S+ FE+NVV+DCVYHKF
Sbjct: 47  ASRQWYHKFHQVIISFGFEINVVEDCVYHKF 77


>gb|AEQ66862.1| reverse transcriptase [Coffea canephora]
          Length = 94

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +2

Query: 11  QWYGKFHQVITSYDFEVNVVDDCVYHKF 94
           QWY KFHQVI S+DFE+N+VDDC+YHKF
Sbjct: 49  QWYFKFHQVIISFDFEMNLVDDCIYHKF 76


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