BLASTX nr result

ID: Atractylodes21_contig00055025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00055025
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528197.1| pentatricopeptide repeat-containing protein,...   139   2e-31
ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
emb|CBI36158.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g...   132   2e-29
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28

>ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532409|gb|EEF34204.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 642

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/85 (75%), Positives = 75/85 (88%)
 Frame = +2

Query: 5   HPDKVYDLYREMCNEGNCFPDTVTYSALMSAFSKLGHDNPAIRLFDEMKENGFHPNAKIY 184
           H +KV+++Y EMCN+GNCFPDTVTYSAL+SAF KLGH + AIRLFDEMKENG +P AKIY
Sbjct: 213 HLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIY 272

Query: 185 TTLLGIYFKAGKVEKALDLVAEMKE 259
           TTLLGIYFK  KVEKALD++ EMK+
Sbjct: 273 TTLLGIYFKLDKVEKALDVIKEMKD 297


>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/85 (75%), Positives = 73/85 (85%)
 Frame = +2

Query: 5   HPDKVYDLYREMCNEGNCFPDTVTYSALMSAFSKLGHDNPAIRLFDEMKENGFHPNAKIY 184
           H +KV++LY EMCNEG+C PDTVTYSAL++AF KLG D+ AI LFDEMKENG HP AKIY
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268

Query: 185 TTLLGIYFKAGKVEKALDLVAEMKE 259
           TT+LGIYFK G+VEKAL LV EMKE
Sbjct: 269 TTILGIYFKLGRVEKALGLVQEMKE 293


>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/85 (75%), Positives = 73/85 (85%)
 Frame = +2

Query: 5   HPDKVYDLYREMCNEGNCFPDTVTYSALMSAFSKLGHDNPAIRLFDEMKENGFHPNAKIY 184
           H +KV++LY EMCNEG+C PDTVTYSAL++AF KLG D+ AI LFDEMKENG HP AKIY
Sbjct: 209 HHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIY 268

Query: 185 TTLLGIYFKAGKVEKALDLVAEMKE 259
           TT+LGIYFK G+VEKAL LV EMKE
Sbjct: 269 TTILGIYFKLGRVEKALGLVQEMKE 293


>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
           gi|357455013|ref|XP_003597787.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
           gi|355486828|gb|AES68031.1| Beta-D-galactosidase
           [Medicago truncatula] gi|355486835|gb|AES68038.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 639

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +2

Query: 5   HPDKVYDLYREMCNEGNCFPDTVTYSALMSAFSKLGHDNPAIRLFDEMKENGFHPNAKIY 184
           H +KV++LY EMC+EG+CFPDTVTYSAL+SAF KL  D+ A+RLFDEMKENG  P AKIY
Sbjct: 210 HHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIY 269

Query: 185 TTLLGIYFKAGKVEKALDLVAEMK 256
           TTL+GIYFK GKVE+AL+LV EM+
Sbjct: 270 TTLMGIYFKLGKVEEALNLVHEMR 293


>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +2

Query: 5   HPDKVYDLYREMCNEGNCFPDTVTYSALMSAFSKLGHDNPAIRLFDEMKENGFHPNAKIY 184
           H +KV++LY EMC+E +CFPDTVTYSAL+SAF+KL  D+ AIRLFDEMKENG  P AKIY
Sbjct: 203 HHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIY 262

Query: 185 TTLLGIYFKAGKVEKALDLVAEMK 256
           TTL+GIYFK GKVE+AL LV EM+
Sbjct: 263 TTLMGIYFKVGKVEEALGLVKEMR 286