BLASTX nr result

ID: Atractylodes21_contig00054477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054477
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301810.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002533499.1| Spotted leaf protein, putative [Ricinus comm...   102   3e-20
ref|XP_004144394.1| PREDICTED: U-box domain-containing protein 9...   100   2e-19
ref|XP_002263607.1| PREDICTED: U-box domain-containing protein 9...    97   1e-18
ref|XP_003626503.1| U-box domain-containing protein [Medicago tr...    97   1e-18

>ref|XP_002301810.1| predicted protein [Populus trichocarpa] gi|222843536|gb|EEE81083.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/66 (72%), Positives = 59/66 (89%)
 Frame = -1

Query: 253 RNKENCIAVLYTICFNDRTTWKEMREEESTYGTLSQLAQNGTSRGKRKANGILDRIYRPI 74
           RNKENCIA+L+TIC NDRT WK MR+EES+YGT+S+LA++GTSR KRKANGIL+R+ R +
Sbjct: 391 RNKENCIAILHTICLNDRTKWKVMRDEESSYGTISKLARHGTSRAKRKANGILERLNRAV 450

Query: 73  NRTHTA 56
           N THTA
Sbjct: 451 NLTHTA 456


>ref|XP_002533499.1| Spotted leaf protein, putative [Ricinus communis]
           gi|223526643|gb|EEF28886.1| Spotted leaf protein,
           putative [Ricinus communis]
          Length = 456

 Score =  102 bits (255), Expect = 3e-20
 Identities = 46/66 (69%), Positives = 57/66 (86%)
 Frame = -1

Query: 253 RNKENCIAVLYTICFNDRTTWKEMREEESTYGTLSQLAQNGTSRGKRKANGILDRIYRPI 74
           RNKENCIA+L+TIC NDRT WK +REEE+ YGT+S+LA+ GTSR KRKANGIL+++ R +
Sbjct: 391 RNKENCIAILHTICSNDRTKWKTVREEENAYGTISKLAREGTSRAKRKANGILEKLNRIV 450

Query: 73  NRTHTA 56
           N THTA
Sbjct: 451 NLTHTA 456


>ref|XP_004144394.1| PREDICTED: U-box domain-containing protein 9-like [Cucumis sativus]
           gi|449506075|ref|XP_004162645.1| PREDICTED: U-box
           domain-containing protein 9-like [Cucumis sativus]
          Length = 461

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = -1

Query: 253 RNKENCIAVLYTICFNDRTTWKEMREEESTYGTLSQLAQNGTSRGKRKANGILDRIYRPI 74
           RNKENCI +++++C  DRT WK+MREEE  Y T+S+LAQNGTSR KRKA+GIL+RI R +
Sbjct: 396 RNKENCIVIIHSVCLYDRTKWKDMREEEKCYRTISELAQNGTSRAKRKASGILERINRVV 455

Query: 73  NRTHTA 56
           N THTA
Sbjct: 456 NMTHTA 461


>ref|XP_002263607.1| PREDICTED: U-box domain-containing protein 9 [Vitis vinifera]
           gi|296083515|emb|CBI23501.3| unnamed protein product
           [Vitis vinifera]
          Length = 449

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/66 (65%), Positives = 57/66 (86%)
 Frame = -1

Query: 253 RNKENCIAVLYTICFNDRTTWKEMREEESTYGTLSQLAQNGTSRGKRKANGILDRIYRPI 74
           RNKENCIA+L+++C NDRT  +E+REEE+TY T+S+L+Q GT+R KRKANGIL+R+ R +
Sbjct: 384 RNKENCIAILHSVCLNDRTKLRELREEENTYRTISKLSQTGTARAKRKANGILERLRRAL 443

Query: 73  NRTHTA 56
           N THTA
Sbjct: 444 NITHTA 449


>ref|XP_003626503.1| U-box domain-containing protein [Medicago truncatula]
           gi|355501518|gb|AES82721.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 552

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/65 (69%), Positives = 55/65 (84%)
 Frame = -1

Query: 253 RNKENCIAVLYTICFNDRTTWKEMREEESTYGTLSQLAQNGTSRGKRKANGILDRIYRPI 74
           R KENCIA+LYTIC+NDRT W+E++EEE T GTLS+LAQ GTSR KRKA+GIL+R+ R  
Sbjct: 395 RCKENCIAILYTICYNDRTMWREIKEEEKTNGTLSKLAQCGTSRAKRKASGILERVNRSP 454

Query: 73  NRTHT 59
           + THT
Sbjct: 455 SLTHT 459


Top