BLASTX nr result

ID: Atractylodes21_contig00054467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054467
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527837.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycin...    61   1e-07

>ref|XP_002527837.1| conserved hypothetical protein [Ricinus communis]
           gi|223532761|gb|EEF34540.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 219 ETSCSYQQYMVQNPTYTVPVL-QSRRTDRSGCAVGCVFNIGAHLFRCFFPCFRIREV 52
           +T  +YQQY V NP Y VPV+ Q+ R +RS    GC    GA+L RCF PCF IREV
Sbjct: 105 DTPLTYQQYAVPNPVYGVPVVEQTPRRERSAGFFGCFVKFGANLIRCFCPCFHIREV 161


>ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|222872808|gb|EEF09939.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/51 (56%), Positives = 34/51 (66%)
 Frame = -3

Query: 207 SYQQYMVQNPTYTVPVLQSRRTDRSGCAVGCVFNIGAHLFRCFFPCFRIRE 55
           SYQQY+V NP Y VPV Q  R ++S    GCV    A+L RCF PCFRI+E
Sbjct: 104 SYQQYLVPNPVYGVPVEQKPRREKSTGFFGCVVTFCANLIRCFCPCFRIQE 154


>ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycine max]
           gi|255633270|gb|ACU16991.1| unknown [Glycine max]
          Length = 144

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 4/56 (7%)
 Frame = -3

Query: 207 SYQQYMVQ--NPTY--TVPVLQSRRTDRSGCAVGCVFNIGAHLFRCFFPCFRIREV 52
           SYQQYMV    P Y   VPV+ + RT+RS    GC+F+ G++LFRC FPC  IR+V
Sbjct: 88  SYQQYMVSVSEPVYGIPVPVIHASRTERSAGQFGCLFSFGSYLFRCLFPCSYIRQV 143


Top