BLASTX nr result

ID: Atractylodes21_contig00054440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00054440
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    57   2e-06
gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncat...    56   3e-06
gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncat...    56   3e-06

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = +2

Query: 56  RNQGSRTLTRSE*EDRRKKGLCFKGGQQFGPSHKCPDANYRVILLAEDEESDSKGDHRLL 235
           R++    L+ +E  +R++KGLCFK G  F P H+CPD   RV++L EDEE + +G    +
Sbjct: 92  RDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKLLAV 151

Query: 236 EI 241
           E+
Sbjct: 152 EV 153


>gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/54 (44%), Positives = 37/54 (68%)
 Frame = +2

Query: 56  RNQGSRTLTRSE*EDRRKKGLCFKGGQQFGPSHKCPDANYRVILLAEDEESDSK 217
           R++  R+L+  E  DRR+KGLCFK G  + P H+CPD N  V++L +D E +++
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSEDENE 96


>gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
          Length = 435

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/54 (44%), Positives = 37/54 (68%)
 Frame = +2

Query: 56  RNQGSRTLTRSE*EDRRKKGLCFKGGQQFGPSHKCPDANYRVILLAEDEESDSK 217
           R++  R+L+  E  DRR+KGLCFK G  + P H+CPD N  V++L +D E +++
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSEDENE 96


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